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ONTOLOGY REPORT - ANNOTATIONS


Term:muscle cell development
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Accession:GO:0055001 term browser browse the term
Definition:The process whose specific outcome is the progression of a muscle cell over time, from its formation to the mature structure. Muscle cell development does not include the steps involved in committing an unspecified cell to the muscle cell fate.


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muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1s calcium voltage-gated channel subunit alpha1 S ISO MGI:1856326 (MGI:53761|PMID:5041196) RGD PMID:5041196 MGI:53761 NCBI chr13:52,889,570...52,964,558
Ensembl chr13:52,889,737...52,964,155
JBrowse link
G Kdm1a lysine demethylase 1A ISO (MGI:4838688|PMID:20833138) RGD PMID:20833138 MGI:4838688 NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
JBrowse link
G Megf10 multiple EGF-like domains 10 ISO (PMID:22101682) RGD PMID:22101682 NCBI chr18:52,215,652...52,366,212
Ensembl chr18:52,215,682...52,366,238
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 ISO MGI:1920431 (MGI:2136698|PMID:11439183) RGD PMID:11439183 MGI:2136698 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 ISO MGI:103296 (MGI:2136698|PMID:11439183) RGD PMID:11439183 MGI:2136698 NCBI chr15:34,493,163...34,502,238
Ensembl chr15:34,493,138...34,504,326
JBrowse link
atrial cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fhl2 four and a half LIM domains 2 ISO (PMID:15509787) RGD PMID:15509787 NCBI chr 9:49,920,611...49,994,906
Ensembl chr 9:49,920,854...49,950,093
JBrowse link
G Nkx2-6 NK2 homeobox 6 ISO (PMID:9621431) RGD PMID:9621431 NCBI chr15:51,034,620...51,038,715
Ensembl chr15:51,034,620...51,038,704
JBrowse link
atrioventricular node cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Maml1 mastermind-like transcriptional coactivator 1 ISO (MGI:5000164|PMID:21266778) RGD PMID:21266778 MGI:5000164 NCBI chr10:35,765,196...35,801,375
Ensembl chr10:35,765,719...35,800,120
JBrowse link
G Nkx2-5 NK2 homeobox 5 IEA
ISO
GO_REF:0000107
MGI:3042511 (MGI:4355491|PMID:19546853)
Ensembl
RGD
PMID:19546853 GO_REF:0000107, MGI:4355491 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn2 actinin alpha 2 ISO (MGI:4366185|PMID:19815520) RGD PMID:19815520 MGI:4366185 NCBI chr17:66,304,530...66,397,647
Ensembl chr17:66,304,501...66,397,653
JBrowse link
G Alpk2 alpha-kinase 2 ISS
ISO
GO_REF:0000024
(PMID:29888752)
UniProt
RGD
PMID:29888752 GO_REF:0000024 NCBI chr18:60,960,009...61,072,116
Ensembl chr18:60,960,662...61,057,365
JBrowse link
G Alpk3 alpha-kinase 3 IBA
ISO
PMID:21873635
MGI:4206048 (MGI:5644402|PMID:21441111)
RGD PMID:21441111, PMID:21873635 MGI:5644402, RGD:13792537 NCBI chr 1:142,882,997...142,931,940
Ensembl chr 1:142,883,040...142,931,940
JBrowse link
G Atg7 autophagy related 7 ISO (MGI:3711608|PMID:17450150) RGD PMID:17450150 MGI:3711608 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Cav3 caveolin 3 ISO MGI:2684578 (MGI:3849772|PMID:19535499) RGD PMID:19535499 MGI:3849772 NCBI chr 4:144,382,945...144,398,919
Ensembl chr 4:144,382,945...144,398,917
JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO MGI:3641051 (MGI:3774881|PMID:18256189) RGD PMID:18256189 MGI:3774881 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Hdac2 histone deacetylase 2 ISO MGI:3712002 (MGI:3711360|PMID:17322895) RGD PMID:17322895 MGI:3711360 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO MGI:2182095|MGI:5648110 (MGI:5648096|PMID:26039991) RGD PMID:26039991 MGI:5648096 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G LOC100911101 leucine-rich repeat-containing protein 10-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:60,099,105...60,100,385
Ensembl chr 7:60,099,120...60,100,517
JBrowse link
G Lrrc10 leucine-rich repeat-containing 10 IBA
ISO
PMID:21873635
MGI:3809940 (MGI:5484795|PMID:23236519)
RGD PMID:23236519, PMID:21873635 MGI:5484795, RGD:13792537 NCBI chr 7:60,087,361...60,088,758
Ensembl chr 7:60,087,429...60,088,250
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO MGI:3041135 (MGI:5529574|PMID:23994610) RGD PMID:23994610 MGI:5529574 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Mir208a microRNA 208a ISO MGI:3709980 (MGI:3708230|PMID:17379774) RGD PMID:17379774 MGI:3708230 NCBI chr15:33,613,451...33,613,533 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO MGI:3850506 (MGI:5632243|PMID:25139234) RGD PMID:25139234 MGI:5632243 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Sgcb sarcoglycan, beta ISO MGI:2153048 (MGI:1352919|PMID:10678176) RGD PMID:10678176 MGI:1352919 NCBI chr14:37,113,194...37,128,623
Ensembl chr14:37,113,210...37,128,737
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO MGI:4849923 (MGI:1927695|PMID:10967099), (MGI:4867054|PMID:21302256) RGD PMID:10967099, PMID:21302256 MGI:1927695, MGI:4867054 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
G Speg striated muscle enriched protein kinase ISO MGI:4830540 (MGI:4830240|PMID:19118250) RGD PMID:19118250 MGI:4830240 NCBI chr 9:82,571,333...82,628,684
Ensembl chr 9:82,571,269...82,628,709
JBrowse link
G Xirp1 xin actin-binding repeat containing 1 ISO MGI:3521795 (MGI:3775114|PMID:17766470) RGD PMID:17766470 MGI:3775114 NCBI chr 8:128,694,809...128,712,092
Ensembl chr 8:128,702,133...128,711,221
JBrowse link
cardiac muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxadr CXADR, Ig-like cell adhesion molecule ISS
ISO
GO_REF:0000024
MGI:3587803 (MGI:3587448|PMID:16079292)
UniProt
RGD
PMID:16079292 GO_REF:0000024, MGI:3587448 NCBI chr11:16,826,269...16,873,564
Ensembl chr11:16,826,399...16,873,562
JBrowse link
G Myh11 myosin heavy chain 11 IEA
ISO
GO_REF:0000107
(PMID:16444274)
Ensembl
RGD
PMID:16444274 GO_REF:0000107 NCBI chr10:764,421...859,184
Ensembl chr10:764,421...859,184
JBrowse link
G Myh6 myosin heavy chain 6 IEA
ISO
GO_REF:0000107
MGI:2182704|MGI:3652543|MGI:3664197 (MGI:1327483|PMID:9884344), (MGI:1333559|PMID:10066683), (MGI:3526615|PMID:15001446), (MGI:83539|PMID:8878443)
Ensembl
RGD
PMID:8878443, PMID:9884344, PMID:10066683, PMID:15001446 GO_REF:0000107, MGI:1327483, MGI:1333559, MGI:3526615, MGI:83539 NCBI chr15:33,605,653...33,629,730
Ensembl chr15:33,605,654...33,629,699
JBrowse link
G Myo18b myosin XVIIIb ISO MGI:3829997 (MGI:3821523|PMID:18761673) RGD PMID:18761673 MGI:3821523 NCBI chr12:49,761,100...49,979,745
Ensembl chr12:49,761,120...49,979,758
JBrowse link
G Sgcd sarcoglycan, delta ISO MGI:2180193 (MGI:5790783|PMID:23695275) RGD PMID:23695275 MGI:5790783 NCBI chr10:32,062,946...32,471,454
Ensembl chr10:32,062,946...32,471,454
JBrowse link
G Tcap titin-cap ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Ttn titin ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:63,565,160...63,837,815 JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:1931047 (MGI:1339868|PMID:10229225) RGD PMID:10229225 MGI:1339868 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:2180033 (MGI:2178865|PMID:11923874) RGD PMID:11923874 MGI:2178865 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
cardiac muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neb nebulin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:37,658,081...37,855,843
Ensembl chr 3:37,658,563...37,854,561
JBrowse link
G Nebl nebulette ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:11822876), (PMID:18823973)
UniProt
RGD
PMID:11822876, PMID:18823973, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:84,141,014...84,247,038
Ensembl chr17:84,140,489...84,488,601
JBrowse link
G Nrap nebulin-related anchoring protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:277,104,519...277,181,397
Ensembl chr 1:277,104,514...277,181,414
JBrowse link
cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 ISO MGI:2180072 (MGI:87509|PMID:9114002) RGD PMID:9114002 MGI:87509 NCBI chr 3:105,507,403...105,512,939
Ensembl chr 3:105,507,403...105,512,939
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 IEA
ISO
GO_REF:0000107
(MGI:2447926|PMID:12507422)
Ensembl
RGD
PMID:12507422 GO_REF:0000107, MGI:2447926 NCBI chr 1:104,147,205...104,166,389
Ensembl chr 1:104,147,206...104,166,367
JBrowse link
G Fhod3 formin homology 2 domain containing 3 IBA
ISO
PMID:21873635
MGI:5440613 (MGI:5436289|PMID:23213483)
RGD PMID:23213483, PMID:21873635 MGI:5436289, RGD:13792537 NCBI chr18:16,650,786...17,332,209
Ensembl chr18:16,650,806...17,332,210
JBrowse link
G Myh10 myosin heavy chain 10 IEA
ISO
GO_REF:0000107
MGI:2386445 (MGI:1099556|PMID:9356462)
Ensembl
RGD
PMID:9356462 GO_REF:0000107, MGI:1099556 NCBI chr10:55,274,910...55,406,738
Ensembl chr10:55,275,411...55,406,732
JBrowse link
G Myl2 myosin light chain 2 IEA
ISO
GO_REF:0000107
MGI:2385922 (MGI:1194431|PMID:9422794)
Ensembl
RGD
PMID:9422794 GO_REF:0000107, MGI:1194431 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239
JBrowse link
G Mylk3 myosin light chain kinase 3 IMP
IBA
PMID:17885681
PMID:21873635
BHF-UCL
GO_Central
PMID:17885681, PMID:21873635 RGD:8554371, RGD:13792537 NCBI chr19:27,388,163...27,442,451
Ensembl chr19:27,404,712...27,441,536
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IEA
ISO
ISS
GO_REF:0000107
UniProtKB:P05622 (MGI:1931346|PMID:11239463)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11239463 GO_REF:0000024, GO_REF:0000107, MGI:1931346 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISS
ISO
GO_REF:0000024
UniProtKB:P26618 (MGI:1931346|PMID:11239463)
UniProt
RGD
PMID:11239463 GO_REF:0000024, MGI:1931346 NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
JBrowse link
G Srf serum response factor ISO MGI:3522206|MGI:3522214 (MGI:3513738|PMID:15569937) RGD PMID:15569937 MGI:3513738 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tcap titin-cap ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Ttn titin ISO (PMID:11846417), (PMID:9817758)
MGI:3654306 (MGI:3653555|PMID:16702235)
RGD PMID:9817758, PMID:11846417, PMID:16702235 MGI:3653555 NCBI chr 3:63,565,160...63,837,815 JBrowse link
cardiac vascular smooth muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO MGI:2447620 (MGI:4838384|PMID:20619341) RGD PMID:20619341 MGI:4838384 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:5298073|PMID:21311046) RGD PMID:21311046 MGI:5298073 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:4461879|PMID:18093989) RGD PMID:18093989 MGI:4461879 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A ISO MGI:104774 (MGI:2664013|PMID:12782680) RGD PMID:12782680 MGI:2664013 NCBI chr15:43,296,997...43,398,314
Ensembl chr15:43,298,794...43,392,451
JBrowse link
G Adra1b adrenoceptor alpha 1B ISO MGI:104773 (MGI:2664013|PMID:12782680) RGD PMID:12782680 MGI:2664013 NCBI chr10:29,392,762...29,450,644
Ensembl chr10:29,392,762...29,450,644
JBrowse link
G Agt angiotensinogen IDA RGD PMID:21376054 RGD:5129173 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:21173078 RGD:6903878 NCBI chr  X:119,389,480...119,393,845
Ensembl chr  X:119,390,013...119,393,842
JBrowse link
G Akap13 A-kinase anchoring protein 13 IMP RGD PMID:18951085 RGD:2312638 NCBI chr 1:137,089,558...137,315,272
Ensembl chr 1:137,014,272...137,315,272
JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 ISO (MGI:5920524|PMID:29065170) RGD PMID:29065170 MGI:5920524 NCBI chr15:28,103,688...28,121,494
Ensembl chr15:28,103,703...28,104,206
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta IMP RGD PMID:21554860 RGD:6907064 NCBI chr 2:230,900,907...231,132,207
Ensembl chr 2:230,901,126...231,132,039
JBrowse link
G Gata4 GATA binding protein 4 IDA RGD PMID:20971938 RGD:5131529 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IDA RGD PMID:27854077 RGD:13792737 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Map2k4 mitogen activated protein kinase kinase 4 IMP RGD PMID:9769323 RGD:7495831 NCBI chr10:52,196,121...52,301,887
Ensembl chr10:52,196,124...52,290,657
JBrowse link
G Myl2 myosin light chain 2 IEP RGD PMID:7657802 RGD:1580138 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239
JBrowse link
G Myocd myocardin IMP RGD PMID:18772130 RGD:5132877 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Nppa natriuretic peptide A IEP RGD PMID:7657802 RGD:1580138 NCBI chr 5:164,808,407...164,809,716
Ensembl chr 5:164,808,323...164,809,705
JBrowse link
G Nppb natriuretic peptide B IEP RGD PMID:7657802 RGD:1580138 NCBI chr 5:164,796,176...164,797,538
Ensembl chr 5:164,796,185...164,797,531
JBrowse link
G Pdlim5 PDZ and LIM domain 5 IGI PMID:24743145 BHF-UCL PMID:24743145 RGD:10054083 NCBI chr 2:247,815,214...247,989,198
Ensembl chr 2:247,818,243...247,988,462
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:19542178 RGD:7775063 NCBI chr 1:248,982,039...250,300,952 JBrowse link
G Sorbs2 sorbin and SH3 domain containing 2 IGI PMID:24743145 BHF-UCL PMID:24743145 RGD:10054083 NCBI chr16:49,626,205...49,820,223
Ensembl chr16:49,626,205...49,820,235
JBrowse link
muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg3l2 AFG3 like matrix AAA peptidase subunit 2 ISO MGI:1856984 (MGI:3618456|PMID:2917690) RGD PMID:2917690 MGI:3618456 NCBI chr18:63,141,418...63,185,510
Ensembl chr18:63,141,418...63,185,510
JBrowse link
G Cacna2d2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 IEA
ISO
GO_REF:0000107
MGI:1856022 (MGI:3710069|PMID:17320843)
Ensembl
RGD
PMID:17320843 GO_REF:0000107, MGI:3710069 NCBI chr 8:116,154,661...116,285,643
Ensembl chr 8:116,154,736...116,284,985
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ISO MGI:1856936 (MGI:3710069|PMID:17320843) RGD PMID:17320843 MGI:3710069 NCBI chr 3:37,950,846...38,211,478
Ensembl chr 3:37,955,069...38,090,526
JBrowse link
G Capzb capping actin protein of muscle Z-line subunit beta ISO (MGI:1350695|PMID:10601341) RGD PMID:10601341 MGI:1350695 NCBI chr 5:157,642,742...157,742,487
Ensembl chr 5:157,642,751...157,742,478
JBrowse link
G Chrnb1 cholinergic receptor nicotinic beta 1 subunit ISO (PMID:8651643) RGD PMID:8651643 NCBI chr10:56,390,671...56,403,255
Ensembl chr10:56,390,671...56,403,188
JBrowse link
G Comp cartilage oligomeric matrix protein IEA
ISO
GO_REF:0000107
MGI:3758741|MGI:5550566 (MGI:4412116|PMID:19808781), (MGI:5568656|PMID:24312420)
Ensembl
RGD
PMID:19808781, PMID:24312420 GO_REF:0000107, MGI:4412116, MGI:5568656 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Dmd dystrophin ISO MGI:103149 (MGI:66476|PMID:8007658) RGD PMID:8007658 MGI:66476 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Dysf dysferlin ISO MGI:1919192|MGI:3055139|MGI:3055150 (MGI:5548046|PMID:24177035), (MGI:5572978|PMID:24685690) RGD PMID:24177035, PMID:24685690 MGI:5548046, MGI:5572978 NCBI chr 4:115,700,942...115,901,873
Ensembl chr 4:115,712,850...115,901,873
JBrowse link
G Flnc filamin C ISO (MGI:3655755|PMID:16914736) RGD PMID:16914736 MGI:3655755 NCBI chr 4:56,710,934...56,738,779
Ensembl chr 4:56,711,049...56,738,791
JBrowse link
G Lox lysyl oxidase ISO MGI:3610732 (MGI:5634219|PMID:25715398) RGD PMID:25715398 MGI:5634219 NCBI chr18:47,500,320...47,577,819
Ensembl chr18:47,500,330...47,577,819
JBrowse link
G Mir208a microRNA 208a ISO (MGI:4415649|PMID:19922871) RGD PMID:19922871 MGI:4415649 NCBI chr15:33,613,451...33,613,533 JBrowse link
G Mir208b microRNA 208b ISO (MGI:4415649|PMID:19922871) RGD PMID:19922871 MGI:4415649 NCBI chr15:33,639,510...33,639,621
Ensembl chr15:33,639,510...33,639,621
JBrowse link
G Mir499a microRNA 499a ISO (MGI:4415649|PMID:19922871) RGD PMID:19922871 MGI:4415649 NCBI chr 3:151,138,862...151,138,926
Ensembl chr 3:151,138,862...151,138,926
JBrowse link
G Myl2 myosin light chain 2 IEA
ISO
GO_REF:0000107
MGI:107956 (MGI:3604156|PMID:15308581)
Ensembl
RGD
PMID:15308581 GO_REF:0000107, MGI:3604156 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239
JBrowse link
G Myof myoferlin ISO MGI:1349385 (MGI:5548046|PMID:24177035) RGD PMID:24177035 MGI:5548046 NCBI chr 1:256,585,410...256,734,727
Ensembl chr 1:256,585,410...256,734,730
JBrowse link
G Neb nebulin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:37,658,081...37,855,843
Ensembl chr 3:37,658,563...37,854,561
JBrowse link
G Nebl nebulette IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:84,141,014...84,247,038
Ensembl chr17:84,140,489...84,488,601
JBrowse link
G Nrap nebulin-related anchoring protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:277,104,519...277,181,397
Ensembl chr 1:277,104,514...277,181,414
JBrowse link
G Pmp22 peripheral myelin protein 22 ISO (MGI:6142352|PMID:28108290) RGD PMID:28108290 MGI:6142352 NCBI chr10:49,538,588...49,568,583
Ensembl chr10:49,538,588...49,568,583
JBrowse link
G Ptcd2 pentatricopeptide repeat domain 2 ISO MGI:3830811 (MGI:3829520|PMID:18729827) RGD PMID:18729827 MGI:3829520 NCBI chr 2:29,570,581...29,598,328
Ensembl chr 2:29,570,538...29,598,277
JBrowse link
G Sgcb sarcoglycan, beta ISO MGI:2153048 (MGI:1352919|PMID:10678176) RGD PMID:10678176 MGI:1352919 NCBI chr14:37,113,194...37,128,623
Ensembl chr14:37,113,210...37,128,737
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO MGI:97272 (MGI:3604156|PMID:15308581) RGD PMID:15308581 MGI:3604156 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 ISO MGI:4124060 (MGI:5300435|PMID:21956870) RGD PMID:21956870 MGI:5300435 NCBI chr 7:40,171,957...40,217,056
Ensembl chr 7:40,171,963...40,217,056
JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 ISO MGI:94909 (MGI:66476|PMID:8007658) RGD PMID:8007658 MGI:66476 NCBI chr14:43,133,224...43,143,942
Ensembl chr14:43,133,218...43,143,973
JBrowse link
G Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 ISO MGI:5546193 (MGI:5511086|PMID:24019467) RGD PMID:24019467 MGI:5511086 NCBI chr10:15,243,429...15,245,757
Ensembl chr10:15,243,429...15,245,757
JBrowse link
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 ISO MGI:5546173 (MGI:5511086|PMID:24019467) RGD PMID:24019467 MGI:5511086 NCBI chr10:81,936,156...81,943,142
Ensembl chr10:81,936,444...81,942,188
JBrowse link
myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn3 calpain 3 ISS
ISO
GO_REF:0000024
MGI:3046866 (MGI:3046122|PMID:15138196)
UniProt
RGD
PMID:15138196 GO_REF:0000024, MGI:3046122 NCBI chr 3:112,227,486...112,278,408
Ensembl chr 3:112,228,720...112,278,408
JBrowse link
G Flii FLII, actin remodeling protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,955,460...46,969,468
Ensembl chr10:46,955,487...46,969,406
JBrowse link
G Klhl41 kelch-like family member 41 ISS
ISO
GO_REF:0000024
(MGI:5486546|PMID:18178185)
UniProt
RGD
PMID:18178185 GO_REF:0000024, MGI:5486546 NCBI chr 3:55,910,177...55,923,303
Ensembl chr 3:55,910,177...55,923,303
JBrowse link
G Lmod1 leiomodin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:52,147,099...52,189,835
Ensembl chr13:52,147,555...52,190,228
JBrowse link
G Lmod2 leiomodin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:51,553,439...51,561,135
Ensembl chr 4:51,553,454...51,561,174
JBrowse link
G Lmod3 leiomodin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:129,604,378...129,619,136
Ensembl chr 4:129,604,267...129,619,142
JBrowse link
G LOC100909784 leiomodin-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:51,661,538...51,669,306
Ensembl chr 4:51,661,654...51,671,203
JBrowse link
G Myh10 myosin heavy chain 10 ISO MGI:2386439|MGI:2386445 (MGI:1354135|PMID:10712438) RGD PMID:10712438 MGI:1354135 NCBI chr10:55,274,910...55,406,738
Ensembl chr10:55,275,411...55,406,732
JBrowse link
G Myh6 myosin heavy chain 6 ISO MGI:2182704|MGI:3652543 (MGI:1327483|PMID:9884344), (MGI:1333559|PMID:10066683), (MGI:83539|PMID:8878443) RGD PMID:8878443, PMID:9884344, PMID:10066683 MGI:1327483, MGI:1333559, MGI:83539 NCBI chr15:33,605,653...33,629,730
Ensembl chr15:33,605,654...33,629,699
JBrowse link
G Neurl2 neuralized E3 ubiquitin protein ligase 2 ISO MGI:3043523 (MGI:3042352|PMID:14960280) RGD PMID:14960280 MGI:3042352 NCBI chr 3:161,296,303...161,299,024
Ensembl chr 3:161,296,304...161,299,024
JBrowse link
G Pgm5 phosphoglucomutase 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:242,582,591...242,765,837
Ensembl chr 1:242,582,642...242,765,807
JBrowse link
G Tmod1 tropomodulin 1 IEA
ISO
IBA
GO_REF:0000107
MGI:2687078 (MGI:2683807|PMID:14657235)
PMID:21873635
Ensembl
RGD
PMID:14657235, PMID:21873635 GO_REF:0000107, MGI:2683807, RGD:13792537 NCBI chr 5:61,635,244...61,712,052
Ensembl chr 5:61,657,507...61,712,051
JBrowse link
G Tmod2 tropomodulin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:82,505,947...82,547,450
Ensembl chr 8:82,506,934...82,533,689
JBrowse link
G Tmod3 tropomodulin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:82,432,165...82,492,243
Ensembl chr 8:82,432,169...82,492,243
JBrowse link
G Tmod4 tropomodulin 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:196,294,990...196,299,896
Ensembl chr 2:196,295,069...196,299,896
JBrowse link
myotube cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmd dystrophin ISO MGI:1856328 (MGI:3849772|PMID:19535499) RGD PMID:19535499 MGI:3849772 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Igf1 insulin-like growth factor 1 ISO
IEA
(PMID:17531227)
GO_REF:0000107
RGD
Ensembl
PMID:17531227 GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Myod1 myogenic differentiation 1 ISO (PMID:10672515) RGD PMID:10672515 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 ISO (MGI:3821556|PMID:18676376) RGD PMID:18676376 MGI:3821556 NCBI chr 3:165,241,750...165,374,644
Ensembl chr 3:165,245,238...165,360,292
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 ISO (MGI:3821556|PMID:18676376) RGD PMID:18676376 MGI:3821556 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G Smyd3 SET and MYND domain containing 3 ISO (MGI:5500979|PMID:23752591) RGD PMID:23752591 MGI:5500979 NCBI chr13:97,330,120...97,807,813 JBrowse link
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad4 SMAD family member 4 IEA
ISO
GO_REF:0000107
(MGI:3689643|PMID:16151019)
Ensembl
RGD
PMID:16151019 GO_REF:0000107, MGI:3689643 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
negative regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 IMP RGD PMID:21170593 RGD:6784534 NCBI chr 4:144,382,945...144,398,919
Ensembl chr 4:144,382,945...144,398,917
JBrowse link
G Ctdp1 CTD phosphatase subunit 1 IMP RGD PMID:22569295 RGD:9686371 NCBI chr18:76,922,913...76,985,095
Ensembl chr18:76,922,934...76,984,203
JBrowse link
G Foxp1 forkhead box P1 IMP RGD PMID:26333362 RGD:11561912 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G G6pd glucose-6-phosphate dehydrogenase IMP RGD PMID:24190878 RGD:10449133 NCBI chr  X:156,274,800...156,293,935
Ensembl chr  X:156,274,800...156,293,926
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha ISO (MGI:4829580|PMID:20516643) RGD PMID:20516643 MGI:4829580 NCBI chr 1:82,097,244...82,108,238
Ensembl chr 1:82,097,247...82,108,203
JBrowse link
G Mir451a microRNA 451a IMP RGD PMID:25209900 RGD:11558015 NCBI chr10:65,291,204...65,291,275
Ensembl chr10:65,291,204...65,291,275
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 IMP RGD PMID:22082674 RGD:11533929 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Pi16 peptidase inhibitor 16 ISO (MGI:3810223|PMID:17909105) RGD PMID:17909105 MGI:3810223 NCBI chr20:6,923,176...6,932,786
Ensembl chr20:6,923,489...6,932,786
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha IMP RGD PMID:22198280 RGD:5687133 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G Rgs2 regulator of G-protein signaling 2 IMP RGD PMID:16380388 RGD:13524577 NCBI chr13:60,846,458...60,849,061
Ensembl chr13:60,846,308...60,849,094
JBrowse link
G Rgs4 regulator of G-protein signaling 4 IDA RGD PMID:9918533 RGD:7207376 NCBI chr13:88,054,817...88,061,108
Ensembl chr13:88,054,817...88,061,108
JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 IMP RGD PMID:25022898 RGD:13464131 NCBI chr11:45,477,053...45,511,409
Ensembl chr11:45,480,250...45,510,961
JBrowse link
G Yy1 YY1 transcription factor IMP RGD PMID:18632988 RGD:9588273 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
G Zfp418 zinc finger protein 418 ISO (MGI:5920524|PMID:29065170) RGD PMID:29065170 MGI:5920524 NCBI chr 1:69,615,413...69,629,997
Ensembl chr 1:69,615,434...69,629,913
JBrowse link
negative regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 ISO (PMID:12847114) RGD PMID:12847114 NCBI chr 4:144,382,945...144,398,919
Ensembl chr 4:144,382,945...144,398,917
JBrowse link
G Mfn2 mitofusin 2 IMP RGD PMID:24777478 RGD:13204833 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pmp22 peripheral myelin protein 22 ISO MGI:1856217 (MGI:5605930|PMID:25014022) RGD PMID:25014022 MGI:5605930 NCBI chr10:49,538,588...49,568,583
Ensembl chr10:49,538,588...49,568,583
JBrowse link
positive regulation of cardiac muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
ISS
IEA
(PMID:20702560)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:20702560 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
positive regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 IMP RGD PMID:18194989 RGD:5129139 NCBI chr 1:277,537,585...277,538,985
Ensembl chr 1:277,537,585...277,538,985
JBrowse link
G Akap6 A-kinase anchoring protein 6 IMP
IDA
RGD PMID:21550986, PMID:16306226 RGD:6902940, RGD:2312613 NCBI chr 6:73,553,111...73,991,992
Ensembl chr 6:73,553,210...73,990,534
JBrowse link
G Ccn4 cellular communication network factor 4 IMP RGD PMID:21376054 RGD:5129173 NCBI chr 7:107,695,227...107,723,759
Ensembl chr 7:107,695,215...107,723,772
JBrowse link
G Ddx39b DExD-box helicase 39B IMP RGD PMID:20116367 RGD:10401141 NCBI chr20:4,806,103...4,818,600
Ensembl chr20:4,806,108...4,818,568
JBrowse link
G Edn1 endothelin 1 ISO RNAcentral:URS000006FDD4_9606|RNAcentral:URS000013D17D_9606 (PMID:24117217) RGD PMID:24117217 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Ep300 E1A binding protein p300 IMP RGD PMID:12724418 RGD:2312280 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Fdps farnesyl diphosphate synthase IMP RGD PMID:19716825 RGD:2316294 NCBI chr 2:188,403,595...188,413,219
Ensembl chr 2:188,392,858...188,413,219
JBrowse link
G Hamp hepcidin antimicrobial peptide IMP RGD PMID:24424338 RGD:11041632 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Igf1 insulin-like growth factor 1 ISO
IEA
RNAcentral:URS000006FDD4_9606|RNAcentral:URS000013D17D_9606 (PMID:24117217)
GO_REF:0000107
RGD
Ensembl
PMID:24117217 GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21318349, PMID:21933187 RGD:10040977, RGD:10040978 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IMP RGD PMID:22989630 RGD:7174736 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 IMP RGD PMID:23261455 RGD:13514044 NCBI chr15:27,739,416...27,749,650
Ensembl chr15:27,739,251...27,749,648
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 IMP RGD PMID:23487407 RGD:8693424 NCBI chr 8:21,669,236...21,680,615
Ensembl chr 8:21,669,236...21,680,615
JBrowse link
G Sirt1 sirtuin 1 IMP RGD PMID:25281201 RGD:13514043 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Slc25a4 solute carrier family 25 member 4 IDA RGD PMID:21325829 RGD:9681466 NCBI chr16:49,266,903...49,270,698
Ensembl chr16:49,266,903...49,270,698
JBrowse link
G Trip10 thyroid hormone receptor interactor 10 IMP RGD PMID:23915320 RGD:11535145 NCBI chr 9:9,689,214...9,702,353
Ensembl chr 9:9,689,475...9,702,306
JBrowse link
positive regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp10 bone morphogenetic protein 10 ISO
IEA
(PMID:17921333)
GO_REF:0000107
RGD
Ensembl
PMID:17921333 GO_REF:0000107 NCBI chr 4:119,224,906...119,230,534
Ensembl chr 4:119,225,040...119,230,728
JBrowse link
G Edn1 endothelin 1 ISO (PMID:12847114) RGD PMID:12847114 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Ep300 E1A binding protein p300 IMP RGD PMID:12724418 RGD:2312280 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Mylk3 myosin light chain kinase 3 IDA PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chr19:27,388,163...27,442,451
Ensembl chr19:27,404,712...27,441,536
JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:3778600|PMID:18178581) RGD PMID:18178581 MGI:3778600 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:1857134 (MGI:1928555|PMID:11146504)
Ensembl
RGD
PMID:11146504 GO_REF:0000107, MGI:1928555 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Lmod3 leiomodin 3 ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,604,378...129,619,136
Ensembl chr 4:129,604,267...129,619,142
JBrowse link
G Myf5 myogenic factor 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Myf6 myogenic factor 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:49,739,643...49,741,490
Ensembl chr 7:49,739,646...49,741,540
JBrowse link
G Myod1 myogenic differentiation 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin ISS
ISO
IBA
GO_REF:0000024
(MGI:62381|PMID:8393145)
PMID:21873635
UniProt
RGD
PMID:8393145, PMID:21873635 GO_REF:0000024, MGI:62381, RGD:13792537 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Shox2 short stature homeobox 2 ISO (MGI:4946446|PMID:21156168) RGD PMID:21156168 MGI:4946446 NCBI chr 2:164,118,175...164,126,783
Ensembl chr 2:164,118,191...164,126,783
JBrowse link
regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col14a1 collagen type XIV alpha 1 chain ISO MGI:3846440 (MGI:5444801|PMID:22906538) RGD PMID:22906538 MGI:5444801 NCBI chr 7:95,054,877...95,274,073
Ensembl chr 7:95,074,236...95,273,298
JBrowse link
regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap13 A-kinase anchoring protein 13 ISS
ISO
GO_REF:0000024
(MGI:5308772|PMID:20139090)
UniProt
RGD
PMID:20139090 GO_REF:0000024, MGI:5308772 NCBI chr 1:137,089,558...137,315,272
Ensembl chr 1:137,014,272...137,315,272
JBrowse link
G Ankrd23 ankyrin repeat domain 23 ISO MGI:1097717|MGI:1861447 (MGI:3760007|PMID:17392382) RGD PMID:17392382 MGI:3760007 NCBI chr 9:43,110,980...43,117,585
Ensembl chr 9:43,112,141...43,116,521
JBrowse link
G Hdac2 histone deacetylase 2 ISO MGI:3712002 (MGI:3711360|PMID:17322895) RGD PMID:17322895 MGI:3711360 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Mef2c myocyte enhancer factor 2C IEA
ISO
GO_REF:0000107
(MGI:3768576|PMID:17875930)
Ensembl
RGD
PMID:17875930 GO_REF:0000107, MGI:3768576 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo22 F-box protein 22 IBA
ISO
PMID:21873635
(MGI:3840749|PMID:19319192)
RGD PMID:19319192, PMID:21873635 MGI:3840749, RGD:13792537 NCBI chr 8:59,770,032...59,786,061
Ensembl chr 8:59,769,994...59,786,065
JBrowse link
G Hdac4 histone deacetylase 4 ISO MGI:1333784|MGI:1931221 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Hdac5 histone deacetylase 5 ISO MGI:1931221|MGI:3036234 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hdac9 histone deacetylase 9 ISO MGI:1333784|MGI:3036284 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 6:53,487,367...54,358,694
Ensembl chr 6:53,488,883...54,059,119
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:2,458,283...2,470,674
Ensembl chr 7:2,458,264...2,470,674
JBrowse link
sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 ISO (MGI:3053481|PMID:15194427) RGD PMID:15194427 MGI:3053481 NCBI chr10:109,518,429...109,521,288
Ensembl chr 3:75,643,054...75,644,954
Ensembl chr10:75,643,054...75,644,954
JBrowse link
G Actn1 actinin, alpha 1 ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 6:103,376,557...103,470,497
Ensembl chr 6:103,375,799...103,470,555
JBrowse link
G Actn2 actinin alpha 2 ISO (PMID:25433700) RGD PMID:25433700 NCBI chr17:66,304,530...66,397,647
Ensembl chr17:66,304,501...66,397,653
JBrowse link
G Bmp10 bone morphogenetic protein 10 IMP PMID:17921333 BHF-UCL PMID:17921333 RGD:2302083 NCBI chr 4:119,224,906...119,230,534
Ensembl chr 4:119,225,040...119,230,728
JBrowse link
G Capn3 calpain 3 IEA
ISO
ISS
GO_REF:0000107
MGI:3046866 (MGI:3046122|PMID:15138196)
GO_REF:0000024
GO_REF:0000002
Ensembl
RGD
UniProt
InterPro
PMID:15138196 GO_REF:0000002, GO_REF:0000024, GO_REF:0000107, MGI:3046122 NCBI chr 3:112,227,486...112,278,408
Ensembl chr 3:112,228,720...112,278,408
JBrowse link
G Capn9 calpain 9 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:57,341,938...57,378,901
Ensembl chr19:57,341,938...57,378,901
JBrowse link
G Casq1 calsequestrin 1 ISS
ISO
GO_REF:0000024
(MGI:5306707|PMID:22049211)
UniProt
RGD
PMID:22049211 GO_REF:0000024, MGI:5306707 NCBI chr13:90,592,676...90,602,365
Ensembl chr13:90,592,681...90,602,365
JBrowse link
G Casq2 calsequestrin 2 IEA
ISO
GO_REF:0000107
(MGI:4453101|PMID:19920148)
Ensembl
RGD
PMID:19920148 GO_REF:0000107, MGI:4453101 NCBI chr 2:204,512,361...204,568,643
Ensembl chr 2:204,512,302...204,568,656
JBrowse link
G Cfl2 cofilin 2 ISO MGI:2182095|MGI:5316051|MGI:5316057 (MGI:5316079|PMID:22343409) RGD PMID:22343409 MGI:5316079 NCBI chr 6:75,759,140...75,763,185
Ensembl chr 6:75,759,140...75,763,185
JBrowse link
G Csrp1 cysteine and glycine-rich protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:52,553,843...52,575,054
Ensembl chr13:52,553,775...52,575,051
JBrowse link
G Csrp2 cysteine and glycine-rich protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:53,630,675...53,649,309
Ensembl chr 7:53,630,621...53,649,310
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:104,147,205...104,166,389
Ensembl chr 1:104,147,206...104,166,367
JBrowse link
G Fhod3 formin homology 2 domain containing 3 IMP
ISO
IBA
PMID:19706596
UniProtKB:F1LQJ2 (MGI:4422153|PMID:19706596)
PMID:21873635
RGD PMID:19706596, PMID:19706596, PMID:21873635 MGI:4422153, RGD:8554207, RGD:13792537 NCBI chr18:16,650,786...17,332,209
Ensembl chr18:16,650,806...17,332,210
JBrowse link
G Foxp1 forkhead box P1 ISO MGI:97350 (MGI:4829405|PMID:20713518) RGD PMID:20713518 MGI:4829405 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G Itgb1 integrin subunit beta 1 IEA
ISO
GO_REF:0000107
MGI:2154539 (MGI:84974|PMID:9004034)
Ensembl
RGD
PMID:9004034 GO_REF:0000107, MGI:84974 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Klhl41 kelch-like family member 41 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:55,910,177...55,923,303
Ensembl chr 3:55,910,177...55,923,303
JBrowse link
G Krt19 keratin 19 ISO (PMID:16000376) RGD PMID:16000376 NCBI chr10:88,055,843...88,060,560
Ensembl chr10:88,055,841...88,060,561
JBrowse link
G Krt8 keratin 8 IDA PMID:15247274 UniProt PMID:15247274 RGD:1600063 NCBI chr 7:143,596,511...143,603,745
Ensembl chr 7:143,596,511...143,603,803
JBrowse link
G Ldb3 LIM domain binding 3 ISO MGI:2652058 (MGI:2153618|PMID:11696561) RGD PMID:11696561 MGI:2153618 NCBI chr16:10,878,348...10,943,016
Ensembl chr16:10,878,334...10,941,501
JBrowse link
G Lmod2 leiomodin 2 IMP
ISO
PMID:18403713
(MGI:5787841|PMID:27274810)
(PMID:18403713)
RGD PMID:18403713, PMID:27274810, PMID:18403713 MGI:5787841, RGD:11344939 NCBI chr 4:51,553,439...51,561,135
Ensembl chr 4:51,553,454...51,561,174
JBrowse link
G Mybpc3 myosin binding protein C3 ISO MGI:2654420|MGI:3606208 (MGI:3616388|PMID:16380103), (MGI:3695637|PMID:17075052), (MGI:3696622|PMID:16224063) RGD PMID:16224063, PMID:16380103, PMID:17075052 MGI:3616388, MGI:3695637, MGI:3696622 NCBI chr 3:79,940,509...79,958,731
Ensembl chr 3:79,940,561...79,958,730
JBrowse link
G Myh6 myosin heavy chain 6 IEA
ISO
GO_REF:0000107
MGI:3652543 (MGI:83539|PMID:8878443)
Ensembl
RGD
PMID:8878443 GO_REF:0000107, MGI:83539 NCBI chr15:33,605,653...33,629,730
Ensembl chr15:33,605,654...33,629,699
JBrowse link
G Mylk3 myosin light chain kinase 3 IMP
ISO
IBA
PMID:18202317
(MGI:3841874|PMID:18202317)
PMID:21873635
RGD PMID:18202317, PMID:18202317, PMID:21873635 MGI:3841874, RGD:8554765, RGD:13792537 NCBI chr19:27,388,163...27,442,451
Ensembl chr19:27,404,712...27,441,536
JBrowse link
G Myoz1 myozenin 1 ISO (MGI:3831256|PMID:18846255) RGD PMID:18846255 MGI:3831256 NCBI chr15:4,077,066...4,084,306
Ensembl chr15:4,077,091...4,084,314
JBrowse link
G Myoz2 myozenin 2 ISO (MGI:3513659|PMID:15543153) RGD PMID:15543153 MGI:3513659 NCBI chr 2:227,180,887...227,207,629
Ensembl chr 2:227,180,886...227,207,635
JBrowse link
G Mypn myopalladin ISO (PMID:11309420) RGD PMID:11309420 NCBI chr20:26,988,820...27,074,106
Ensembl chr20:26,988,774...27,074,138
JBrowse link
G Neurl2 neuralized E3 ubiquitin protein ligase 2 ISO MGI:3043523 (MGI:3042352|PMID:14960280) RGD PMID:14960280 MGI:3042352 NCBI chr 3:161,296,303...161,299,024
Ensembl chr 3:161,296,304...161,299,024
JBrowse link
G Nkx2-5 NK2 homeobox 5 IEA
ISO
GO_REF:0000107
MGI:1914004 (MGI:4829405|PMID:20713518)
Ensembl
RGD
PMID:20713518 GO_REF:0000107, MGI:4829405 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha ISO MGI:2182091|MGI:3512112 (MGI:3821563|PMID:18316483) RGD PMID:18316483 MGI:3821563 NCBI chr10:97,940,705...97,959,199
Ensembl chr10:97,940,705...97,957,336
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Srf serum response factor ISO MGI:3522206|MGI:3522214 (MGI:3513738|PMID:15569937) RGD PMID:15569937 MGI:3513738 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Synpo2l synaptopodin 2-like ISO (MGI:6102963|PMID:29206857) RGD PMID:29206857 MGI:6102963 NCBI chr15:4,064,706...4,074,151
Ensembl chr15:4,064,706...4,072,635
JBrowse link
G Tcap titin-cap ISO
IEA
(PMID:9817758)
GO_REF:0000107
RGD
Ensembl
PMID:9817758 GO_REF:0000107 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Tnnt1 troponin T1, slow skeletal type IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:72,889,270...72,899,629
Ensembl chr 1:72,889,270...72,899,659
JBrowse link
G Tnnt2 troponin T2, cardiac type IBA
ISO
PMID:21873635
MGI:3692448|MGI:3692450|MGI:3692451 (MGI:1342889|PMID:10449439)
RGD PMID:10449439, PMID:21873635 MGI:1342889, RGD:13792537 NCBI chr13:52,662,974...52,680,992
Ensembl chr13:52,662,996...52,680,990
JBrowse link
G Tnnt3 troponin T3, fast skeletal type IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:215,666,628...215,683,628
Ensembl chr 1:215,666,628...215,683,628
JBrowse link
G Tpm1 tropomyosin 1 ISO
IEA
(PMID:11273725)
GO_REF:0000107
RGD
Ensembl
PMID:11273725 GO_REF:0000107 NCBI chr 8:72,814,737...72,841,496
Ensembl chr 8:72,814,740...72,842,228
JBrowse link
G Ttn titin IDA
ISO
MGI:3654306 (MGI:3653555|PMID:16702235), (MGI:3760201|PMID:17360664)
(PMID:11846417), (PMID:9817758)
RGD PMID:9817758, PMID:11846417, PMID:16702235, PMID:17360664, PMID:11034912 MGI:3653555, MGI:3760201, RGD:634444 NCBI chr 3:63,565,160...63,837,815 JBrowse link
G Wdr1 WD repeat domain 1 IBA
ISO
PMID:21873635
(MGI:5574550|PMID:24840128)
RGD PMID:24840128, PMID:21873635 MGI:5574550, RGD:13792537 NCBI chr14:76,990,014...77,023,739
Ensembl chr14:76,989,919...77,023,726
JBrowse link
G Xirp1 xin actin-binding repeat containing 1 ISO MGI:3521795 (MGI:3775114|PMID:17766470) RGD PMID:17766470 MGI:3775114 NCBI chr 8:128,694,809...128,712,092
Ensembl chr 8:128,702,133...128,711,221
JBrowse link
sarcomerogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk3 myosin light chain kinase 3 IMP PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chr19:27,388,163...27,442,451
Ensembl chr19:27,404,712...27,441,536
JBrowse link
G Tcap titin-cap ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Ttn titin ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:63,565,160...63,837,815 JBrowse link
sinoatrial node cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bves blood vessel epicardial substance ISO MGI:2385915 (MGI:5424322|PMID:22354168) RGD PMID:22354168 MGI:5424322 NCBI chr20:50,439,885...50,474,678
Ensembl chr20:50,439,883...50,474,678
JBrowse link
G Popdc2 popeye domain containing 2 ISO MGI:3773727 (MGI:5424322|PMID:22354168) RGD PMID:22354168 MGI:5424322 NCBI chr11:64,915,041...64,954,704
Ensembl chr11:64,936,692...64,952,687
JBrowse link
G Tbx3 T-box transcription factor 3 ISO MGI:3710254 (MGI:4366226|PMID:19096026) RGD PMID:19096026 MGI:4366226 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle ISS
ISO
GO_REF:0000024
(MGI:78319|PMID:2731651)
UniProt
RGD
PMID:2731651 GO_REF:0000024, MGI:78319 NCBI chr19:56,674,072...56,677,084
Ensembl chr19:56,674,074...56,677,084
JBrowse link
G Actn1 actinin, alpha 1 ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 6:103,376,557...103,470,497
Ensembl chr 6:103,375,799...103,470,555
JBrowse link
G Bin3 bridging integrator 3 ISO MGI:3512131 (MGI:5517720|PMID:23872330) RGD PMID:23872330 MGI:5517720 NCBI chr15:51,799,339...51,818,697
Ensembl chr15:51,779,839...51,818,699
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S ISO MGI:1856326 (MGI:3630139|PMID:289331), (MGI:53207|PMID:8462749), (MGI:66718|PMID:8143864) RGD PMID:289331, PMID:8143864, PMID:8462749 MGI:3630139, MGI:53207, MGI:66718 NCBI chr13:52,889,570...52,964,558
Ensembl chr13:52,889,737...52,964,155
JBrowse link
G Cav2 caveolin 2 IEA
ISO
ISS
GO_REF:0000107
MGI:2180372 (MGI:3695802|PMID:17200204)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17200204 GO_REF:0000024, GO_REF:0000107, MGI:3695802 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G Dner delta/notch-like EGF repeat containing ISO (MGI:3583881|PMID:15965470) RGD PMID:15965470 MGI:3583881 NCBI chr 9:91,965,866...92,291,172
Ensembl chr 9:91,965,866...92,291,220
JBrowse link
G Gpx1 glutathione peroxidase 1 IEA
ISO
GO_REF:0000107
MGI:2158814 (MGI:3662804|PMID:16962942)
Ensembl
RGD
PMID:16962942 GO_REF:0000107, MGI:3662804 NCBI chr 8:117,117,430...117,118,528
Ensembl chr 8:117,117,430...117,118,522
JBrowse link
G Homer1 homer scaffold protein 1 ISO MGI:3526529 (MGI:3784629|PMID:18268005) RGD PMID:18268005 MGI:3784629 NCBI chr 2:22,909,550...23,012,303
Ensembl chr 2:22,909,569...23,009,678
JBrowse link
G Kel Kell metallo-endopeptidase (Kell blood group) ISO MGI:103569 (MGI:5550316|PMID:24405768) RGD PMID:24405768 MGI:5550316 NCBI chr 4:70,979,504...70,996,920
Ensembl chr 4:70,979,504...70,996,395
JBrowse link
G Klhl40 kelch-like family member 40 IBA
ISO
PMID:21873635
MGI:4843038 (MGI:5586592|PMID:24960163), (MGI:5700633|PMID:25940086)
RGD PMID:24960163, PMID:25940086, PMID:21873635 MGI:5586592, MGI:5700633, RGD:13792537 NCBI chr 8:130,416,265...130,421,871
Ensembl chr 8:130,416,355...130,421,871
JBrowse link
G Klhl41 kelch-like family member 41 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:55,910,177...55,923,303
Ensembl chr 3:55,910,177...55,923,303
JBrowse link
G Lmod3 leiomodin 3 ISO (MGI:5644091|PMID:25774500), (MGI:5648755|PMID:26035871) RGD PMID:25774500, PMID:26035871 MGI:5644091, MGI:5648755 NCBI chr 4:129,604,378...129,619,136
Ensembl chr 4:129,604,267...129,619,142
JBrowse link
G Myod1 myogenic differentiation 1 IEA
ISO
GO_REF:0000107
(MGI:3840749|PMID:19319192)
Ensembl
RGD
PMID:19319192 GO_REF:0000107, MGI:3840749 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin ISO MGI:1857667 (MGI:62381|PMID:8393145) RGD PMID:8393145 MGI:62381 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Myorg myogenesis regulating glycosidase ISO
IBA
(PMID:19706595)
(MGI:4422154|PMID:19706595)
PMID:21873635
RGD PMID:19706595, PMID:21873635 MGI:4422154, RGD:13792537 NCBI chr 5:57,873,404...57,882,008
Ensembl chr 5:57,876,498...57,881,944
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 ISO MGI:2182778 (MGI:1933051|PMID:11254352) RGD PMID:11254352 MGI:1933051 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G P2rx2 purinergic receptor P2X 2 IEA
ISO
GO_REF:0000107
MGI:2687349 (MGI:3766888|PMID:17706883)
Ensembl
RGD
PMID:17706883 GO_REF:0000107, MGI:3766888 NCBI chr12:52,397,666...52,401,005
Ensembl chr12:52,397,792...52,401,015
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha ISO (MGI:3586394|PMID:16024798) RGD PMID:16024798 MGI:3586394 NCBI chr 2:241,909,332...242,186,861
Ensembl chr 2:241,909,832...242,184,854
JBrowse link
G Rcan1 regulator of calcineurin 1 ISO (MGI:3586394|PMID:16024798) RGD PMID:16024798 MGI:3586394 NCBI chr11:32,539,689...32,620,274
Ensembl chr11:32,539,683...32,550,539
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:42,324,594...42,549,907
Ensembl chr17:42,324,594...42,422,053
JBrowse link
G Ryr1 ryanodine receptor 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:3764002|PMID:18003898)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18003898 GO_REF:0000024, GO_REF:0000107, MGI:3764002 NCBI chr 1:87,959,596...88,066,252
Ensembl chr 1:87,959,712...88,066,101
JBrowse link
G Selenon selenoprotein N IBA
ISO
PMID:21873635
(MGI:5494499|PMID:23325319)
RGD PMID:23325319, PMID:21873635 MGI:5494499, RGD:13792537 NCBI chr 5:152,748,497...152,765,489
Ensembl chr 5:152,750,284...152,762,165
JBrowse link
G Six1 SIX homeobox 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Ski SKI proto-oncogene ISO MGI:2177555 (MGI:1095997|PMID:9284043) RGD PMID:9284043 MGI:1095997 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Smo smoothened, frizzled class receptor IEA
ISO
GO_REF:0000107
MGI:2176256|MGI:3573783 (MGI:5438143|PMID:22987639)
Ensembl
RGD
PMID:22987639 GO_REF:0000107, MGI:5438143 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Stac3 SH3 and cysteine rich domain 3 ISO (MGI:5508972|PMID:23626854) RGD PMID:23626854 MGI:5508972 NCBI chr 7:70,807,427...70,815,271
Ensembl chr 7:70,807,867...70,815,270
JBrowse link
G Wnt10b Wnt family member 10B ISO MGI:3582610 (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
G Xk X-linked Kx blood group IEA
ISO
GO_REF:0000107
MGI:1346053 (MGI:5550316|PMID:24405768)
Ensembl
RGD
PMID:24405768 GO_REF:0000107, MGI:5550316 NCBI chr  X:14,497,376...14,534,479
Ensembl chr  X:14,498,119...14,534,473
JBrowse link
skeletal muscle myosin thick filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcap titin-cap ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Tmod1 tropomodulin 1 NOT ISO MGI:2687078 (MGI:2683807|PMID:14657235) RGD PMID:14657235 MGI:2683807 NCBI chr 5:61,635,244...61,712,052
Ensembl chr 5:61,657,507...61,712,051
JBrowse link
G Ttn titin ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:63,565,160...63,837,815 JBrowse link
skeletal muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle ISO
IBA
ISS
(PMID:11333380)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:11333380, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:56,674,072...56,677,084
Ensembl chr19:56,674,074...56,677,084
JBrowse link
G Actc1 actin, alpha, cardiac muscle 1 ISO MGI:2180072 (MGI:87509|PMID:9114002) RGD PMID:9114002 MGI:87509 NCBI chr 3:105,507,403...105,512,939
Ensembl chr 3:105,507,403...105,512,939
JBrowse link
G Lmod3 leiomodin 3 ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,604,378...129,619,136
Ensembl chr 4:129,604,267...129,619,142
JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Tcap titin-cap ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Ttn titin ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:63,565,160...63,837,815 JBrowse link
skeletal myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD-like apoptosis regulator ISO (MGI:5707584|PMID:21364645) RGD PMID:21364645 MGI:5707584 NCBI chr 9:65,534,608...65,586,395
Ensembl chr 9:65,534,704...65,587,251
JBrowse link
striated muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sdc1 syndecan 1 ISO (PMID:9566955) RGD PMID:9566955 NCBI chr 6:33,885,576...33,908,038
Ensembl chr 6:33,885,495...33,908,016
JBrowse link
G Ttn titin ISO MGI:1856953 (MGI:3604932|PMID:16115818) RGD PMID:16115818 MGI:3604932 NCBI chr 3:63,565,160...63,837,815 JBrowse link
T-tubule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 ISO MGI:2179754 (MGI:3610760|PMID:16292983), (MGI:4844023|PMID:20610380) RGD PMID:16292983, PMID:20610380 MGI:3610760, MGI:4844023 NCBI chr 2:231,224,643...231,522,655
Ensembl chr 2:231,226,949...231,648,122
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ISO MGI:4415164 (MGI:5314827|PMID:22355118) RGD PMID:22355118 MGI:5314827 NCBI chr12:39,553,903...39,603,326
Ensembl chr12:39,553,903...39,603,326
JBrowse link
G Bin1 bridging integrator 1 IEA
ISO
GO_REF:0000107
(MGI:5583915|PMID:24836577)
(PMID:24755653)
Ensembl
RGD
PMID:24755653, PMID:24836577 GO_REF:0000107, MGI:5583915 NCBI chr18:25,163,575...25,222,139
Ensembl chr18:25,163,561...25,222,135
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 IEA
ISO
GO_REF:0000107
MGI:1328311 (MGI:5927126|PMID:28706255)
Ensembl
RGD
PMID:28706255 GO_REF:0000107, MGI:5927126 NCBI chr 1:104,147,205...104,166,389
Ensembl chr 1:104,147,206...104,166,367
JBrowse link
G Dysf dysferlin IBA
ISO
PMID:21873635
MGI:1919192|MGI:3055150 (MGI:5545678|PMID:24302765), (MGI:5548046|PMID:24177035)
RGD PMID:24177035, PMID:24302765, PMID:21873635 MGI:5545678, MGI:5548046, RGD:13792537 NCBI chr 4:115,700,942...115,901,873
Ensembl chr 4:115,712,850...115,901,873
JBrowse link
G Fer1l5 fer-1-like family member 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:42,943,362...42,998,126
Ensembl chr 9:42,945,358...42,998,109
JBrowse link
G Myof myoferlin IBA
ISO
PMID:21873635
MGI:1349385 (MGI:5548046|PMID:24177035)
RGD PMID:24177035, PMID:21873635 MGI:5548046, RGD:13792537 NCBI chr 1:256,585,410...256,734,727
Ensembl chr 1:256,585,410...256,734,730
JBrowse link
G Sypl2 synaptophysin-like 2 ISO MGI:1330824 (MGI:5927126|PMID:28706255) RGD PMID:28706255 MGI:5927126 NCBI chr 2:211,003,046...211,017,778
Ensembl chr 2:211,003,046...211,017,778
JBrowse link
vascular associated smooth muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin ISO (MGI:3772552|PMID:18097473) RGD PMID:18097473 MGI:3772552 NCBI chr 1:175,443,189...175,447,260
Ensembl chr 1:175,445,088...175,447,259
JBrowse link
G Comp cartilage oligomeric matrix protein IEA
ISO
GO_REF:0000107
(MGI:5318950|PMID:21350216)
Ensembl
RGD
PMID:21350216 GO_REF:0000107, MGI:5318950 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Eng endoglin ISO (MGI:3721185|PMID:17628518) RGD PMID:17628518 MGI:3721185 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEA
ISO
GO_REF:0000107
(MGI:4453944|PMID:20122914)
Ensembl
RGD
PMID:20122914 GO_REF:0000107, MGI:4453944 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO (PMID:15821257) RGD PMID:15821257 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Ramp2 receptor activity modifying protein 2 ISS
ISO
GO_REF:0000024
(MGI:3772552|PMID:18097473)
UniProt
RGD
PMID:18097473 GO_REF:0000024, MGI:3772552 NCBI chr10:89,166,170...89,168,962
Ensembl chr10:89,166,890...89,168,965
JBrowse link
G Sgcb sarcoglycan, beta ISO MGI:2153048 (MGI:1352919|PMID:10678176) RGD PMID:10678176 MGI:1352919 NCBI chr14:37,113,194...37,128,623
Ensembl chr14:37,113,210...37,128,737
JBrowse link
ventricular cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 IEA
ISO
GO_REF:0000107
MGI:3050453|MGI:3663625 (MGI:3711608|PMID:17450150)
Ensembl
RGD
PMID:17450150 GO_REF:0000107, MGI:3711608 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Bmp10 bone morphogenetic protein 10 IEA
ISO
GO_REF:0000107
(MGI:3695247|PMID:16798733)
Ensembl
RGD
PMID:16798733 GO_REF:0000107, MGI:3695247 NCBI chr 4:119,224,906...119,230,534
Ensembl chr 4:119,225,040...119,230,728
JBrowse link
G Ccnb1 cyclin B1 IEP RGD PMID:15253691 RGD:2301353 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEP RGD PMID:15253691 RGD:2301353 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G Fhl2 four and a half LIM domains 2 ISO (PMID:15509787) RGD PMID:15509787 NCBI chr 9:49,920,611...49,994,906
Ensembl chr 9:49,920,854...49,950,093
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO (MGI:3784153|PMID:17332425) RGD PMID:17332425 MGI:3784153 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Lmna lamin A/C IEA
ISO
GO_REF:0000107
MGI:2177930 (MGI:3027329|PMID:14755333)
Ensembl
RGD
PMID:14755333 GO_REF:0000107, MGI:3027329 NCBI chr 2:187,842,884...187,863,552
Ensembl chr 2:187,842,885...187,863,516
JBrowse link
G Myh10 myosin heavy chain 10 IEA
ISO
GO_REF:0000107
MGI:2386445|MGI:3052104 (MGI:3052228|PMID:12893741)
Ensembl
RGD
PMID:12893741 GO_REF:0000107, MGI:3052228 NCBI chr10:55,274,910...55,406,738
Ensembl chr10:55,275,411...55,406,732
JBrowse link
G Nkx2-6 NK2 homeobox 6 ISO (PMID:9621431) RGD PMID:9621431 NCBI chr15:51,034,620...51,038,715
Ensembl chr15:51,034,620...51,038,704
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO MGI:1857844|MGI:2386742 (MGI:3841866|PMID:18292603) RGD PMID:18292603 MGI:3841866 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
ventricular cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2a myocyte enhancer factor 2a IEA
ISO
GO_REF:0000107
(MGI:2429350|PMID:12379849)
Ensembl
RGD
PMID:12379849 GO_REF:0000107, MGI:2429350 NCBI chr 1:128,207,715...128,341,681
Ensembl chr 1:128,209,971...128,341,263
JBrowse link
G Nkx2-5 NK2 homeobox 5 IEA
ISO
GO_REF:0000107
MGI:3042511 (MGI:4355491|PMID:19546853)
Ensembl
RGD
PMID:19546853 GO_REF:0000107, MGI:4355491 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular developmental process 4457
        cell development 2442
          muscle cell development 212
            T-tubule organization 8
            cardiac muscle cell development + 101
            myotube cell development + 43
            striated muscle cell development + 134
            vascular associated smooth muscle cell development + 9
Path 2
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular developmental process 4457
        cell differentiation 4362
          muscle cell differentiation 419
            muscle cell development 212
              T-tubule organization 8
              cardiac muscle cell development + 101
              myotube cell development + 43
              striated muscle cell development + 134
              vascular associated smooth muscle cell development + 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.