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ONTOLOGY REPORT - ANNOTATIONS


Term:striated muscle cell development
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Accession:GO:0055002 term browser browse the term
Definition:The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle.


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striated muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sdc1 syndecan 1 ISO (PMID:9566955) RGD PMID:9566955 NCBI chr 6:33,885,576...33,908,038
Ensembl chr 6:33,885,495...33,908,016
JBrowse link
G Ttn titin ISO MGI:1856953 (MGI:3604932|PMID:16115818) RGD PMID:16115818 MGI:3604932 NCBI chr 3:63,565,160...63,837,815 JBrowse link
cardiac muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxadr CXADR, Ig-like cell adhesion molecule ISS
ISO
GO_REF:0000024
MGI:3587803 (MGI:3587448|PMID:16079292)
UniProt
RGD
PMID:16079292 GO_REF:0000024, MGI:3587448 NCBI chr11:16,826,269...16,873,564
Ensembl chr11:16,826,399...16,873,562
JBrowse link
G Myh11 myosin heavy chain 11 IEA
ISO
GO_REF:0000107
(PMID:16444274)
Ensembl
RGD
PMID:16444274 GO_REF:0000107 NCBI chr10:764,421...859,184
Ensembl chr10:764,421...859,184
JBrowse link
G Myh6 myosin heavy chain 6 IEA
ISO
GO_REF:0000107
MGI:2182704|MGI:3652543|MGI:3664197 (MGI:1327483|PMID:9884344), (MGI:1333559|PMID:10066683), (MGI:3526615|PMID:15001446), (MGI:83539|PMID:8878443)
Ensembl
RGD
PMID:8878443, PMID:9884344, PMID:10066683, PMID:15001446 GO_REF:0000107, MGI:1327483, MGI:1333559, MGI:3526615, MGI:83539 NCBI chr15:33,605,653...33,629,730
Ensembl chr15:33,605,654...33,629,699
JBrowse link
G Myo18b myosin XVIIIb ISO MGI:3829997 (MGI:3821523|PMID:18761673) RGD PMID:18761673 MGI:3821523 NCBI chr12:49,761,100...49,979,745
Ensembl chr12:49,761,120...49,979,758
JBrowse link
G Sgcd sarcoglycan, delta ISO MGI:2180193 (MGI:5790783|PMID:23695275) RGD PMID:23695275 MGI:5790783 NCBI chr10:32,062,946...32,471,454
Ensembl chr10:32,062,946...32,471,454
JBrowse link
G Tcap titin-cap ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Ttn titin ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:63,565,160...63,837,815 JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:1931047 (MGI:1339868|PMID:10229225) RGD PMID:10229225 MGI:1339868 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:2180033 (MGI:2178865|PMID:11923874) RGD PMID:11923874 MGI:2178865 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
cardiac muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neb nebulin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:37,658,081...37,855,843
Ensembl chr 3:37,658,563...37,854,561
JBrowse link
G Nebl nebulette ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:11822876), (PMID:18823973)
UniProt
RGD
PMID:11822876, PMID:18823973, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:84,141,014...84,247,038
Ensembl chr17:84,140,489...84,488,601
JBrowse link
G Nrap nebulin-related anchoring protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:277,104,519...277,181,397
Ensembl chr 1:277,104,514...277,181,414
JBrowse link
cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 ISO MGI:2180072 (MGI:87509|PMID:9114002) RGD PMID:9114002 MGI:87509 NCBI chr 3:105,507,403...105,512,939
Ensembl chr 3:105,507,403...105,512,939
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 IEA
ISO
GO_REF:0000107
(MGI:2447926|PMID:12507422)
Ensembl
RGD
PMID:12507422 GO_REF:0000107, MGI:2447926 NCBI chr 1:104,147,205...104,166,389
Ensembl chr 1:104,147,206...104,166,367
JBrowse link
G Fhod3 formin homology 2 domain containing 3 IBA
ISO
PMID:21873635
MGI:5440613 (MGI:5436289|PMID:23213483)
RGD PMID:23213483, PMID:21873635 MGI:5436289, RGD:13792537 NCBI chr18:16,650,786...17,332,209
Ensembl chr18:16,650,806...17,332,210
JBrowse link
G Myh10 myosin heavy chain 10 IEA
ISO
GO_REF:0000107
MGI:2386445 (MGI:1099556|PMID:9356462)
Ensembl
RGD
PMID:9356462 GO_REF:0000107, MGI:1099556 NCBI chr10:55,274,910...55,406,738
Ensembl chr10:55,275,411...55,406,732
JBrowse link
G Myl2 myosin light chain 2 IEA
ISO
GO_REF:0000107
MGI:2385922 (MGI:1194431|PMID:9422794)
Ensembl
RGD
PMID:9422794 GO_REF:0000107, MGI:1194431 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239
JBrowse link
G Mylk3 myosin light chain kinase 3 IMP
IBA
PMID:17885681
PMID:21873635
BHF-UCL
GO_Central
PMID:17885681, PMID:21873635 RGD:8554371, RGD:13792537 NCBI chr19:27,388,163...27,442,451
Ensembl chr19:27,404,712...27,441,536
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IEA
ISO
ISS
GO_REF:0000107
UniProtKB:P05622 (MGI:1931346|PMID:11239463)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11239463 GO_REF:0000024, GO_REF:0000107, MGI:1931346 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISS
ISO
GO_REF:0000024
UniProtKB:P26618 (MGI:1931346|PMID:11239463)
UniProt
RGD
PMID:11239463 GO_REF:0000024, MGI:1931346 NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
JBrowse link
G Srf serum response factor ISO MGI:3522206|MGI:3522214 (MGI:3513738|PMID:15569937) RGD PMID:15569937 MGI:3513738 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tcap titin-cap ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Ttn titin ISO (PMID:11846417), (PMID:9817758)
MGI:3654306 (MGI:3653555|PMID:16702235)
RGD PMID:9817758, PMID:11846417, PMID:16702235 MGI:3653555 NCBI chr 3:63,565,160...63,837,815 JBrowse link
muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg3l2 AFG3 like matrix AAA peptidase subunit 2 ISO MGI:1856984 (MGI:3618456|PMID:2917690) RGD PMID:2917690 MGI:3618456 NCBI chr18:63,141,418...63,185,510
Ensembl chr18:63,141,418...63,185,510
JBrowse link
G Cacna2d2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 IEA
ISO
GO_REF:0000107
MGI:1856022 (MGI:3710069|PMID:17320843)
Ensembl
RGD
PMID:17320843 GO_REF:0000107, MGI:3710069 NCBI chr 8:116,154,661...116,285,643
Ensembl chr 8:116,154,736...116,284,985
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ISO MGI:1856936 (MGI:3710069|PMID:17320843) RGD PMID:17320843 MGI:3710069 NCBI chr 3:37,950,846...38,211,478
Ensembl chr 3:37,955,069...38,090,526
JBrowse link
G Capzb capping actin protein of muscle Z-line subunit beta ISO (MGI:1350695|PMID:10601341) RGD PMID:10601341 MGI:1350695 NCBI chr 5:157,642,742...157,742,487
Ensembl chr 5:157,642,751...157,742,478
JBrowse link
G Chrnb1 cholinergic receptor nicotinic beta 1 subunit ISO (PMID:8651643) RGD PMID:8651643 NCBI chr10:56,390,671...56,403,255
Ensembl chr10:56,390,671...56,403,188
JBrowse link
G Comp cartilage oligomeric matrix protein IEA
ISO
GO_REF:0000107
MGI:3758741|MGI:5550566 (MGI:4412116|PMID:19808781), (MGI:5568656|PMID:24312420)
Ensembl
RGD
PMID:19808781, PMID:24312420 GO_REF:0000107, MGI:4412116, MGI:5568656 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Dmd dystrophin ISO MGI:103149 (MGI:66476|PMID:8007658) RGD PMID:8007658 MGI:66476 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Dysf dysferlin ISO MGI:1919192|MGI:3055139|MGI:3055150 (MGI:5548046|PMID:24177035), (MGI:5572978|PMID:24685690) RGD PMID:24177035, PMID:24685690 MGI:5548046, MGI:5572978 NCBI chr 4:115,700,942...115,901,873
Ensembl chr 4:115,712,850...115,901,873
JBrowse link
G Flnc filamin C ISO (MGI:3655755|PMID:16914736) RGD PMID:16914736 MGI:3655755 NCBI chr 4:56,710,934...56,738,779
Ensembl chr 4:56,711,049...56,738,791
JBrowse link
G Lox lysyl oxidase ISO MGI:3610732 (MGI:5634219|PMID:25715398) RGD PMID:25715398 MGI:5634219 NCBI chr18:47,500,320...47,577,819
Ensembl chr18:47,500,330...47,577,819
JBrowse link
G Mir208a microRNA 208a ISO (MGI:4415649|PMID:19922871) RGD PMID:19922871 MGI:4415649 NCBI chr15:33,613,451...33,613,533 JBrowse link
G Mir208b microRNA 208b ISO (MGI:4415649|PMID:19922871) RGD PMID:19922871 MGI:4415649 NCBI chr15:33,639,510...33,639,621
Ensembl chr15:33,639,510...33,639,621
JBrowse link
G Mir499a microRNA 499a ISO (MGI:4415649|PMID:19922871) RGD PMID:19922871 MGI:4415649 NCBI chr 3:151,138,862...151,138,926
Ensembl chr 3:151,138,862...151,138,926
JBrowse link
G Myl2 myosin light chain 2 IEA
ISO
GO_REF:0000107
MGI:107956 (MGI:3604156|PMID:15308581)
Ensembl
RGD
PMID:15308581 GO_REF:0000107, MGI:3604156 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239
JBrowse link
G Myof myoferlin ISO MGI:1349385 (MGI:5548046|PMID:24177035) RGD PMID:24177035 MGI:5548046 NCBI chr 1:256,585,410...256,734,727
Ensembl chr 1:256,585,410...256,734,730
JBrowse link
G Neb nebulin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:37,658,081...37,855,843
Ensembl chr 3:37,658,563...37,854,561
JBrowse link
G Nebl nebulette IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:84,141,014...84,247,038
Ensembl chr17:84,140,489...84,488,601
JBrowse link
G Nrap nebulin-related anchoring protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:277,104,519...277,181,397
Ensembl chr 1:277,104,514...277,181,414
JBrowse link
G Pmp22 peripheral myelin protein 22 ISO (MGI:6142352|PMID:28108290) RGD PMID:28108290 MGI:6142352 NCBI chr10:49,538,588...49,568,583
Ensembl chr10:49,538,588...49,568,583
JBrowse link
G Ptcd2 pentatricopeptide repeat domain 2 ISO MGI:3830811 (MGI:3829520|PMID:18729827) RGD PMID:18729827 MGI:3829520 NCBI chr 2:29,570,581...29,598,328
Ensembl chr 2:29,570,538...29,598,277
JBrowse link
G Sgcb sarcoglycan, beta ISO MGI:2153048 (MGI:1352919|PMID:10678176) RGD PMID:10678176 MGI:1352919 NCBI chr14:37,113,194...37,128,623
Ensembl chr14:37,113,210...37,128,737
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO MGI:97272 (MGI:3604156|PMID:15308581) RGD PMID:15308581 MGI:3604156 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 ISO MGI:4124060 (MGI:5300435|PMID:21956870) RGD PMID:21956870 MGI:5300435 NCBI chr 7:40,171,957...40,217,056
Ensembl chr 7:40,171,963...40,217,056
JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 ISO MGI:94909 (MGI:66476|PMID:8007658) RGD PMID:8007658 MGI:66476 NCBI chr14:43,133,224...43,143,942
Ensembl chr14:43,133,218...43,143,973
JBrowse link
G Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 ISO MGI:5546193 (MGI:5511086|PMID:24019467) RGD PMID:24019467 MGI:5511086 NCBI chr10:15,243,429...15,245,757
Ensembl chr10:15,243,429...15,245,757
JBrowse link
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 ISO MGI:5546173 (MGI:5511086|PMID:24019467) RGD PMID:24019467 MGI:5511086 NCBI chr10:81,936,156...81,943,142
Ensembl chr10:81,936,444...81,942,188
JBrowse link
myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn3 calpain 3 ISS
ISO
GO_REF:0000024
MGI:3046866 (MGI:3046122|PMID:15138196)
UniProt
RGD
PMID:15138196 GO_REF:0000024, MGI:3046122 NCBI chr 3:112,227,486...112,278,408
Ensembl chr 3:112,228,720...112,278,408
JBrowse link
G Flii FLII, actin remodeling protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,955,460...46,969,468
Ensembl chr10:46,955,487...46,969,406
JBrowse link
G Klhl41 kelch-like family member 41 ISS
ISO
GO_REF:0000024
(MGI:5486546|PMID:18178185)
UniProt
RGD
PMID:18178185 GO_REF:0000024, MGI:5486546 NCBI chr 3:55,910,177...55,923,303
Ensembl chr 3:55,910,177...55,923,303
JBrowse link
G Lmod1 leiomodin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:52,147,099...52,189,835
Ensembl chr13:52,147,555...52,190,228
JBrowse link
G Lmod2 leiomodin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:51,553,439...51,561,135
Ensembl chr 4:51,553,454...51,561,174
JBrowse link
G Lmod3 leiomodin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:129,604,378...129,619,136
Ensembl chr 4:129,604,267...129,619,142
JBrowse link
G LOC100909784 leiomodin-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:51,661,538...51,669,306
Ensembl chr 4:51,661,654...51,671,203
JBrowse link
G Myh10 myosin heavy chain 10 ISO MGI:2386439|MGI:2386445 (MGI:1354135|PMID:10712438) RGD PMID:10712438 MGI:1354135 NCBI chr10:55,274,910...55,406,738
Ensembl chr10:55,275,411...55,406,732
JBrowse link
G Myh6 myosin heavy chain 6 ISO MGI:2182704|MGI:3652543 (MGI:1327483|PMID:9884344), (MGI:1333559|PMID:10066683), (MGI:83539|PMID:8878443) RGD PMID:8878443, PMID:9884344, PMID:10066683 MGI:1327483, MGI:1333559, MGI:83539 NCBI chr15:33,605,653...33,629,730
Ensembl chr15:33,605,654...33,629,699
JBrowse link
G Neurl2 neuralized E3 ubiquitin protein ligase 2 ISO MGI:3043523 (MGI:3042352|PMID:14960280) RGD PMID:14960280 MGI:3042352 NCBI chr 3:161,296,303...161,299,024
Ensembl chr 3:161,296,304...161,299,024
JBrowse link
G Pgm5 phosphoglucomutase 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:242,582,591...242,765,837
Ensembl chr 1:242,582,642...242,765,807
JBrowse link
G Tmod1 tropomodulin 1 IEA
ISO
IBA
GO_REF:0000107
MGI:2687078 (MGI:2683807|PMID:14657235)
PMID:21873635
Ensembl
RGD
PMID:14657235, PMID:21873635 GO_REF:0000107, MGI:2683807, RGD:13792537 NCBI chr 5:61,635,244...61,712,052
Ensembl chr 5:61,657,507...61,712,051
JBrowse link
G Tmod2 tropomodulin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:82,505,947...82,547,450
Ensembl chr 8:82,506,934...82,533,689
JBrowse link
G Tmod3 tropomodulin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:82,432,165...82,492,243
Ensembl chr 8:82,432,169...82,492,243
JBrowse link
G Tmod4 tropomodulin 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:196,294,990...196,299,896
Ensembl chr 2:196,295,069...196,299,896
JBrowse link
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad4 SMAD family member 4 IEA
ISO
GO_REF:0000107
(MGI:3689643|PMID:16151019)
Ensembl
RGD
PMID:16151019 GO_REF:0000107, MGI:3689643 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
negative regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 ISO (PMID:12847114) RGD PMID:12847114 NCBI chr 4:144,382,945...144,398,919
Ensembl chr 4:144,382,945...144,398,917
JBrowse link
G Mfn2 mitofusin 2 IMP RGD PMID:24777478 RGD:13204833 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pmp22 peripheral myelin protein 22 ISO MGI:1856217 (MGI:5605930|PMID:25014022) RGD PMID:25014022 MGI:5605930 NCBI chr10:49,538,588...49,568,583
Ensembl chr10:49,538,588...49,568,583
JBrowse link
positive regulation of cardiac muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
ISS
IEA
(PMID:20702560)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:20702560 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
positive regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp10 bone morphogenetic protein 10 ISO
IEA
(PMID:17921333)
GO_REF:0000107
RGD
Ensembl
PMID:17921333 GO_REF:0000107 NCBI chr 4:119,224,906...119,230,534
Ensembl chr 4:119,225,040...119,230,728
JBrowse link
G Edn1 endothelin 1 ISO (PMID:12847114) RGD PMID:12847114 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Ep300 E1A binding protein p300 IMP RGD PMID:12724418 RGD:2312280 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Mylk3 myosin light chain kinase 3 IDA PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chr19:27,388,163...27,442,451
Ensembl chr19:27,404,712...27,441,536
JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:3778600|PMID:18178581) RGD PMID:18178581 MGI:3778600 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:1857134 (MGI:1928555|PMID:11146504)
Ensembl
RGD
PMID:11146504 GO_REF:0000107, MGI:1928555 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Lmod3 leiomodin 3 ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,604,378...129,619,136
Ensembl chr 4:129,604,267...129,619,142
JBrowse link
G Myf5 myogenic factor 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Myf6 myogenic factor 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:49,739,643...49,741,490
Ensembl chr 7:49,739,646...49,741,540
JBrowse link
G Myod1 myogenic differentiation 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin ISS
ISO
IBA
GO_REF:0000024
(MGI:62381|PMID:8393145)
PMID:21873635
UniProt
RGD
PMID:8393145, PMID:21873635 GO_REF:0000024, MGI:62381, RGD:13792537 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Shox2 short stature homeobox 2 ISO (MGI:4946446|PMID:21156168) RGD PMID:21156168 MGI:4946446 NCBI chr 2:164,118,175...164,126,783
Ensembl chr 2:164,118,191...164,126,783
JBrowse link
regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap13 A-kinase anchoring protein 13 ISS
ISO
GO_REF:0000024
(MGI:5308772|PMID:20139090)
UniProt
RGD
PMID:20139090 GO_REF:0000024, MGI:5308772 NCBI chr 1:137,089,558...137,315,272
Ensembl chr 1:137,014,272...137,315,272
JBrowse link
G Ankrd23 ankyrin repeat domain 23 ISO MGI:1097717|MGI:1861447 (MGI:3760007|PMID:17392382) RGD PMID:17392382 MGI:3760007 NCBI chr 9:43,110,980...43,117,585
Ensembl chr 9:43,112,141...43,116,521
JBrowse link
G Hdac2 histone deacetylase 2 ISO MGI:3712002 (MGI:3711360|PMID:17322895) RGD PMID:17322895 MGI:3711360 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Mef2c myocyte enhancer factor 2C IEA
ISO
GO_REF:0000107
(MGI:3768576|PMID:17875930)
Ensembl
RGD
PMID:17875930 GO_REF:0000107, MGI:3768576 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo22 F-box protein 22 IBA
ISO
PMID:21873635
(MGI:3840749|PMID:19319192)
RGD PMID:19319192, PMID:21873635 MGI:3840749, RGD:13792537 NCBI chr 8:59,770,032...59,786,061
Ensembl chr 8:59,769,994...59,786,065
JBrowse link
G Hdac4 histone deacetylase 4 ISO MGI:1333784|MGI:1931221 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Hdac5 histone deacetylase 5 ISO MGI:1931221|MGI:3036234 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hdac9 histone deacetylase 9 ISO MGI:1333784|MGI:3036284 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 6:53,487,367...54,358,694
Ensembl chr 6:53,488,883...54,059,119
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:2,458,283...2,470,674
Ensembl chr 7:2,458,264...2,470,674
JBrowse link
sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 ISO (MGI:3053481|PMID:15194427) RGD PMID:15194427 MGI:3053481 NCBI chr10:109,518,429...109,521,288
Ensembl chr 3:75,643,054...75,644,954
Ensembl chr10:75,643,054...75,644,954
JBrowse link
G Actn1 actinin, alpha 1 ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 6:103,376,557...103,470,497
Ensembl chr 6:103,375,799...103,470,555
JBrowse link
G Actn2 actinin alpha 2 ISO (PMID:25433700) RGD PMID:25433700 NCBI chr17:66,304,530...66,397,647
Ensembl chr17:66,304,501...66,397,653
JBrowse link
G Bmp10 bone morphogenetic protein 10 IMP PMID:17921333 BHF-UCL PMID:17921333 RGD:2302083 NCBI chr 4:119,224,906...119,230,534
Ensembl chr 4:119,225,040...119,230,728
JBrowse link
G Capn3 calpain 3 IEA
ISO
ISS
GO_REF:0000107
MGI:3046866 (MGI:3046122|PMID:15138196)
GO_REF:0000024
GO_REF:0000002
Ensembl
RGD
UniProt
InterPro
PMID:15138196 GO_REF:0000002, GO_REF:0000024, GO_REF:0000107, MGI:3046122 NCBI chr 3:112,227,486...112,278,408
Ensembl chr 3:112,228,720...112,278,408
JBrowse link
G Capn9 calpain 9 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:57,341,938...57,378,901
Ensembl chr19:57,341,938...57,378,901
JBrowse link
G Casq1 calsequestrin 1 ISS
ISO
GO_REF:0000024
(MGI:5306707|PMID:22049211)
UniProt
RGD
PMID:22049211 GO_REF:0000024, MGI:5306707 NCBI chr13:90,592,676...90,602,365
Ensembl chr13:90,592,681...90,602,365
JBrowse link
G Casq2 calsequestrin 2 IEA
ISO
GO_REF:0000107
(MGI:4453101|PMID:19920148)
Ensembl
RGD
PMID:19920148 GO_REF:0000107, MGI:4453101 NCBI chr 2:204,512,361...204,568,643
Ensembl chr 2:204,512,302...204,568,656
JBrowse link
G Cfl2 cofilin 2 ISO MGI:2182095|MGI:5316051|MGI:5316057 (MGI:5316079|PMID:22343409) RGD PMID:22343409 MGI:5316079 NCBI chr 6:75,759,140...75,763,185
Ensembl chr 6:75,759,140...75,763,185
JBrowse link
G Csrp1 cysteine and glycine-rich protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:52,553,843...52,575,054
Ensembl chr13:52,553,775...52,575,051
JBrowse link
G Csrp2 cysteine and glycine-rich protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:53,630,675...53,649,309
Ensembl chr 7:53,630,621...53,649,310
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:104,147,205...104,166,389
Ensembl chr 1:104,147,206...104,166,367
JBrowse link
G Fhod3 formin homology 2 domain containing 3 IMP
ISO
IBA
PMID:19706596
UniProtKB:F1LQJ2 (MGI:4422153|PMID:19706596)
PMID:21873635
RGD PMID:19706596, PMID:19706596, PMID:21873635 MGI:4422153, RGD:8554207, RGD:13792537 NCBI chr18:16,650,786...17,332,209
Ensembl chr18:16,650,806...17,332,210
JBrowse link
G Foxp1 forkhead box P1 ISO MGI:97350 (MGI:4829405|PMID:20713518) RGD PMID:20713518 MGI:4829405 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G Itgb1 integrin subunit beta 1 IEA
ISO
GO_REF:0000107
MGI:2154539 (MGI:84974|PMID:9004034)
Ensembl
RGD
PMID:9004034 GO_REF:0000107, MGI:84974 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Klhl41 kelch-like family member 41 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:55,910,177...55,923,303
Ensembl chr 3:55,910,177...55,923,303
JBrowse link
G Krt19 keratin 19 ISO (PMID:16000376) RGD PMID:16000376 NCBI chr10:88,055,843...88,060,560
Ensembl chr10:88,055,841...88,060,561
JBrowse link
G Krt8 keratin 8 IDA PMID:15247274 UniProt PMID:15247274 RGD:1600063 NCBI chr 7:143,596,511...143,603,745
Ensembl chr 7:143,596,511...143,603,803
JBrowse link
G Ldb3 LIM domain binding 3 ISO MGI:2652058 (MGI:2153618|PMID:11696561) RGD PMID:11696561 MGI:2153618 NCBI chr16:10,878,348...10,943,016
Ensembl chr16:10,878,334...10,941,501
JBrowse link
G Lmod2 leiomodin 2 IMP
ISO
PMID:18403713
(MGI:5787841|PMID:27274810)
(PMID:18403713)
RGD PMID:18403713, PMID:27274810, PMID:18403713 MGI:5787841, RGD:11344939 NCBI chr 4:51,553,439...51,561,135
Ensembl chr 4:51,553,454...51,561,174
JBrowse link
G Mybpc3 myosin binding protein C3 ISO MGI:2654420|MGI:3606208 (MGI:3616388|PMID:16380103), (MGI:3695637|PMID:17075052), (MGI:3696622|PMID:16224063) RGD PMID:16224063, PMID:16380103, PMID:17075052 MGI:3616388, MGI:3695637, MGI:3696622 NCBI chr 3:79,940,509...79,958,731
Ensembl chr 3:79,940,561...79,958,730
JBrowse link
G Myh6 myosin heavy chain 6 IEA
ISO
GO_REF:0000107
MGI:3652543 (MGI:83539|PMID:8878443)
Ensembl
RGD
PMID:8878443 GO_REF:0000107, MGI:83539 NCBI chr15:33,605,653...33,629,730
Ensembl chr15:33,605,654...33,629,699
JBrowse link
G Mylk3 myosin light chain kinase 3 IMP
ISO
IBA
PMID:18202317
(MGI:3841874|PMID:18202317)
PMID:21873635
RGD PMID:18202317, PMID:18202317, PMID:21873635 MGI:3841874, RGD:8554765, RGD:13792537 NCBI chr19:27,388,163...27,442,451
Ensembl chr19:27,404,712...27,441,536
JBrowse link
G Myoz1 myozenin 1 ISO (MGI:3831256|PMID:18846255) RGD PMID:18846255 MGI:3831256 NCBI chr15:4,077,066...4,084,306
Ensembl chr15:4,077,091...4,084,314
JBrowse link
G Myoz2 myozenin 2 ISO (MGI:3513659|PMID:15543153) RGD PMID:15543153 MGI:3513659 NCBI chr 2:227,180,887...227,207,629
Ensembl chr 2:227,180,886...227,207,635
JBrowse link
G Mypn myopalladin ISO (PMID:11309420) RGD PMID:11309420 NCBI chr20:26,988,820...27,074,106
Ensembl chr20:26,988,774...27,074,138
JBrowse link
G Neurl2 neuralized E3 ubiquitin protein ligase 2 ISO MGI:3043523 (MGI:3042352|PMID:14960280) RGD PMID:14960280 MGI:3042352 NCBI chr 3:161,296,303...161,299,024
Ensembl chr 3:161,296,304...161,299,024
JBrowse link
G Nkx2-5 NK2 homeobox 5 IEA
ISO
GO_REF:0000107
MGI:1914004 (MGI:4829405|PMID:20713518)
Ensembl
RGD
PMID:20713518 GO_REF:0000107, MGI:4829405 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha ISO MGI:2182091|MGI:3512112 (MGI:3821563|PMID:18316483) RGD PMID:18316483 MGI:3821563 NCBI chr10:97,940,705...97,959,199
Ensembl chr10:97,940,705...97,957,336
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Srf serum response factor ISO MGI:3522206|MGI:3522214 (MGI:3513738|PMID:15569937) RGD PMID:15569937 MGI:3513738 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Synpo2l synaptopodin 2-like ISO (MGI:6102963|PMID:29206857) RGD PMID:29206857 MGI:6102963 NCBI chr15:4,064,706...4,074,151
Ensembl chr15:4,064,706...4,072,635
JBrowse link
G Tcap titin-cap ISO
IEA
(PMID:9817758)
GO_REF:0000107
RGD
Ensembl
PMID:9817758 GO_REF:0000107 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Tnnt1 troponin T1, slow skeletal type IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:72,889,270...72,899,629
Ensembl chr 1:72,889,270...72,899,659
JBrowse link
G Tnnt2 troponin T2, cardiac type IBA
ISO
PMID:21873635
MGI:3692448|MGI:3692450|MGI:3692451 (MGI:1342889|PMID:10449439)
RGD PMID:10449439, PMID:21873635 MGI:1342889, RGD:13792537 NCBI chr13:52,662,974...52,680,992
Ensembl chr13:52,662,996...52,680,990
JBrowse link
G Tnnt3 troponin T3, fast skeletal type IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:215,666,628...215,683,628
Ensembl chr 1:215,666,628...215,683,628
JBrowse link
G Tpm1 tropomyosin 1 ISO
IEA
(PMID:11273725)
GO_REF:0000107
RGD
Ensembl
PMID:11273725 GO_REF:0000107 NCBI chr 8:72,814,737...72,841,496
Ensembl chr 8:72,814,740...72,842,228
JBrowse link
G Ttn titin IDA
ISO
MGI:3654306 (MGI:3653555|PMID:16702235), (MGI:3760201|PMID:17360664)
(PMID:11846417), (PMID:9817758)
RGD PMID:9817758, PMID:11846417, PMID:16702235, PMID:17360664, PMID:11034912 MGI:3653555, MGI:3760201, RGD:634444 NCBI chr 3:63,565,160...63,837,815 JBrowse link
G Wdr1 WD repeat domain 1 IBA
ISO
PMID:21873635
(MGI:5574550|PMID:24840128)
RGD PMID:24840128, PMID:21873635 MGI:5574550, RGD:13792537 NCBI chr14:76,990,014...77,023,739
Ensembl chr14:76,989,919...77,023,726
JBrowse link
G Xirp1 xin actin-binding repeat containing 1 ISO MGI:3521795 (MGI:3775114|PMID:17766470) RGD PMID:17766470 MGI:3775114 NCBI chr 8:128,694,809...128,712,092
Ensembl chr 8:128,702,133...128,711,221
JBrowse link
sarcomerogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk3 myosin light chain kinase 3 IMP PMID:17885681 BHF-UCL PMID:17885681 RGD:8554371 NCBI chr19:27,388,163...27,442,451
Ensembl chr19:27,404,712...27,441,536
JBrowse link
G Tcap titin-cap ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Ttn titin ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:63,565,160...63,837,815 JBrowse link
skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle ISS
ISO
GO_REF:0000024
(MGI:78319|PMID:2731651)
UniProt
RGD
PMID:2731651 GO_REF:0000024, MGI:78319 NCBI chr19:56,674,072...56,677,084
Ensembl chr19:56,674,074...56,677,084
JBrowse link
G Actn1 actinin, alpha 1 ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 6:103,376,557...103,470,497
Ensembl chr 6:103,375,799...103,470,555
JBrowse link
G Bin3 bridging integrator 3 ISO MGI:3512131 (MGI:5517720|PMID:23872330) RGD PMID:23872330 MGI:5517720 NCBI chr15:51,799,339...51,818,697
Ensembl chr15:51,779,839...51,818,699
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S ISO MGI:1856326 (MGI:3630139|PMID:289331), (MGI:53207|PMID:8462749), (MGI:66718|PMID:8143864) RGD PMID:289331, PMID:8143864, PMID:8462749 MGI:3630139, MGI:53207, MGI:66718 NCBI chr13:52,889,570...52,964,558
Ensembl chr13:52,889,737...52,964,155
JBrowse link
G Cav2 caveolin 2 IEA
ISO
ISS
GO_REF:0000107
MGI:2180372 (MGI:3695802|PMID:17200204)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17200204 GO_REF:0000024, GO_REF:0000107, MGI:3695802 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G Dner delta/notch-like EGF repeat containing ISO (MGI:3583881|PMID:15965470) RGD PMID:15965470 MGI:3583881 NCBI chr 9:91,965,866...92,291,172
Ensembl chr 9:91,965,866...92,291,220
JBrowse link
G Gpx1 glutathione peroxidase 1 IEA
ISO
GO_REF:0000107
MGI:2158814 (MGI:3662804|PMID:16962942)
Ensembl
RGD
PMID:16962942 GO_REF:0000107, MGI:3662804 NCBI chr 8:117,117,430...117,118,528
Ensembl chr 8:117,117,430...117,118,522
JBrowse link
G Homer1 homer scaffold protein 1 ISO MGI:3526529 (MGI:3784629|PMID:18268005) RGD PMID:18268005 MGI:3784629 NCBI chr 2:22,909,550...23,012,303
Ensembl chr 2:22,909,569...23,009,678
JBrowse link
G Kel Kell metallo-endopeptidase (Kell blood group) ISO MGI:103569 (MGI:5550316|PMID:24405768) RGD PMID:24405768 MGI:5550316 NCBI chr 4:70,979,504...70,996,920
Ensembl chr 4:70,979,504...70,996,395
JBrowse link
G Klhl40 kelch-like family member 40 IBA
ISO
PMID:21873635
MGI:4843038 (MGI:5586592|PMID:24960163), (MGI:5700633|PMID:25940086)
RGD PMID:24960163, PMID:25940086, PMID:21873635 MGI:5586592, MGI:5700633, RGD:13792537 NCBI chr 8:130,416,265...130,421,871
Ensembl chr 8:130,416,355...130,421,871
JBrowse link
G Klhl41 kelch-like family member 41 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:55,910,177...55,923,303
Ensembl chr 3:55,910,177...55,923,303
JBrowse link
G Lmod3 leiomodin 3 ISO (MGI:5644091|PMID:25774500), (MGI:5648755|PMID:26035871) RGD PMID:25774500, PMID:26035871 MGI:5644091, MGI:5648755 NCBI chr 4:129,604,378...129,619,136
Ensembl chr 4:129,604,267...129,619,142
JBrowse link
G Myod1 myogenic differentiation 1 IEA
ISO
GO_REF:0000107
(MGI:3840749|PMID:19319192)
Ensembl
RGD
PMID:19319192 GO_REF:0000107, MGI:3840749 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin ISO MGI:1857667 (MGI:62381|PMID:8393145) RGD PMID:8393145 MGI:62381 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Myorg myogenesis regulating glycosidase ISO
IBA
(PMID:19706595)
(MGI:4422154|PMID:19706595)
PMID:21873635
RGD PMID:19706595, PMID:21873635 MGI:4422154, RGD:13792537 NCBI chr 5:57,873,404...57,882,008
Ensembl chr 5:57,876,498...57,881,944
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 ISO MGI:2182778 (MGI:1933051|PMID:11254352) RGD PMID:11254352 MGI:1933051 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G P2rx2 purinergic receptor P2X 2 IEA
ISO
GO_REF:0000107
MGI:2687349 (MGI:3766888|PMID:17706883)
Ensembl
RGD
PMID:17706883 GO_REF:0000107, MGI:3766888 NCBI chr12:52,397,666...52,401,005
Ensembl chr12:52,397,792...52,401,015
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha ISO (MGI:3586394|PMID:16024798) RGD PMID:16024798 MGI:3586394 NCBI chr 2:241,909,332...242,186,861
Ensembl chr 2:241,909,832...242,184,854
JBrowse link
G Rcan1 regulator of calcineurin 1 ISO (MGI:3586394|PMID:16024798) RGD PMID:16024798 MGI:3586394 NCBI chr11:32,539,689...32,620,274
Ensembl chr11:32,539,683...32,550,539
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:42,324,594...42,549,907
Ensembl chr17:42,324,594...42,422,053
JBrowse link
G Ryr1 ryanodine receptor 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:3764002|PMID:18003898)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18003898 GO_REF:0000024, GO_REF:0000107, MGI:3764002 NCBI chr 1:87,959,596...88,066,252
Ensembl chr 1:87,959,712...88,066,101
JBrowse link
G Selenon selenoprotein N IBA
ISO
PMID:21873635
(MGI:5494499|PMID:23325319)
RGD PMID:23325319, PMID:21873635 MGI:5494499, RGD:13792537 NCBI chr 5:152,748,497...152,765,489
Ensembl chr 5:152,750,284...152,762,165
JBrowse link
G Six1 SIX homeobox 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Ski SKI proto-oncogene ISO MGI:2177555 (MGI:1095997|PMID:9284043) RGD PMID:9284043 MGI:1095997 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Smo smoothened, frizzled class receptor IEA
ISO
GO_REF:0000107
MGI:2176256|MGI:3573783 (MGI:5438143|PMID:22987639)
Ensembl
RGD
PMID:22987639 GO_REF:0000107, MGI:5438143 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Stac3 SH3 and cysteine rich domain 3 ISO (MGI:5508972|PMID:23626854) RGD PMID:23626854 MGI:5508972 NCBI chr 7:70,807,427...70,815,271
Ensembl chr 7:70,807,867...70,815,270
JBrowse link
G Wnt10b Wnt family member 10B ISO MGI:3582610 (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
G Xk X-linked Kx blood group IEA
ISO
GO_REF:0000107
MGI:1346053 (MGI:5550316|PMID:24405768)
Ensembl
RGD
PMID:24405768 GO_REF:0000107, MGI:5550316 NCBI chr  X:14,497,376...14,534,479
Ensembl chr  X:14,498,119...14,534,473
JBrowse link
skeletal muscle myosin thick filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcap titin-cap ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Tmod1 tropomodulin 1 NOT ISO MGI:2687078 (MGI:2683807|PMID:14657235) RGD PMID:14657235 MGI:2683807 NCBI chr 5:61,635,244...61,712,052
Ensembl chr 5:61,657,507...61,712,051
JBrowse link
G Ttn titin ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:63,565,160...63,837,815 JBrowse link
skeletal muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle ISO
IBA
ISS
(PMID:11333380)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:11333380, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:56,674,072...56,677,084
Ensembl chr19:56,674,074...56,677,084
JBrowse link
G Actc1 actin, alpha, cardiac muscle 1 ISO MGI:2180072 (MGI:87509|PMID:9114002) RGD PMID:9114002 MGI:87509 NCBI chr 3:105,507,403...105,512,939
Ensembl chr 3:105,507,403...105,512,939
JBrowse link
G Lmod3 leiomodin 3 ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,604,378...129,619,136
Ensembl chr 4:129,604,267...129,619,142
JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Tcap titin-cap ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Ttn titin ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:63,565,160...63,837,815 JBrowse link
skeletal myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD-like apoptosis regulator ISO (MGI:5707584|PMID:21364645) RGD PMID:21364645 MGI:5707584 NCBI chr 9:65,534,608...65,586,395
Ensembl chr 9:65,534,704...65,587,251
JBrowse link
ventricular cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2a myocyte enhancer factor 2a IEA
ISO
GO_REF:0000107
(MGI:2429350|PMID:12379849)
Ensembl
RGD
PMID:12379849 GO_REF:0000107, MGI:2429350 NCBI chr 1:128,207,715...128,341,681
Ensembl chr 1:128,209,971...128,341,263
JBrowse link
G Nkx2-5 NK2 homeobox 5 IEA
ISO
GO_REF:0000107
MGI:3042511 (MGI:4355491|PMID:19546853)
Ensembl
RGD
PMID:19546853 GO_REF:0000107, MGI:4355491 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular developmental process 4457
        cell development 2442
          muscle cell development 212
            striated muscle cell development 134
              muscle fiber development + 74
              myofibril assembly + 70
Path 2
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular developmental process 4457
        cell differentiation 4362
          muscle cell differentiation 419
            striated muscle cell differentiation 333
              striated muscle cell development 134
                muscle fiber development + 74
                myofibril assembly + 70
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.