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ONTOLOGY REPORT - ANNOTATIONS


Term:cardiac cell development
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Accession:GO:0055006 term browser browse the term
Definition:The process whose specific outcome is the progression of a cardiac cell over time, from its formation to the mature state. A cardiac cell is a cell that will form part of the cardiac organ of an individual.
Synonyms:exact_synonym: cardiocyte development
 related_synonym: heart cell development


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cardiac cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase ISO (MGI:MGI:5486070|PMID:23342106) RGD PMID:23342106 MGI:MGI:5486070 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
atrial cardiac muscle cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fhl2 four and a half LIM domains 2 ISO (PMID:15509787) RGD PMID:15509787 NCBI chr 9:49,920,611...49,994,906
Ensembl chr 9:49,920,854...49,950,093
JBrowse link
G Nkx2-6 NK2 homeobox 6 ISO (PMID:9621431) RGD PMID:9621431 NCBI chr15:51,034,620...51,038,715
Ensembl chr15:51,034,620...51,038,704
JBrowse link
atrioventricular node cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Maml1 mastermind-like transcriptional coactivator 1 ISO (MGI:MGI:5000164|PMID:21266778) RGD PMID:21266778 MGI:MGI:5000164 NCBI chr10:35,765,196...35,801,375
Ensembl chr10:35,765,719...35,800,120
JBrowse link
G Nkx2-5 NK2 homeobox 5 ISO
IEA
MGI:MGI:3042511 (MGI:MGI:4355491|PMID:19546853)
GO_REF:0000107
RGD
Ensembl
PMID:19546853 GO_REF:0000107, MGI:MGI:4355491 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
cardiac muscle cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn2 actinin alpha 2 ISO (MGI:MGI:4366185|PMID:19815520) RGD PMID:19815520 MGI:MGI:4366185 NCBI chr17:66,304,530...66,397,647
Ensembl chr17:66,304,501...66,397,653
JBrowse link
G Alpk2 alpha-kinase 2 ISS
ISO
GO_REF:0000024
(PMID:29888752)
UniProt
RGD
PMID:29888752 GO_REF:0000024 NCBI chr18:60,960,009...61,072,116
Ensembl chr18:60,960,662...61,057,365
JBrowse link
G Alpk3 alpha-kinase 3 ISO
IBA
MGI:MGI:4206048 (MGI:MGI:5644402|PMID:21441111)
PMID:21873635
RGD PMID:21441111, PMID:21873635 MGI:MGI:5644402, RGD:13792537 NCBI chr 1:142,882,997...142,931,940
Ensembl chr 1:142,883,040...142,931,940
JBrowse link
G Atg7 autophagy related 7 ISO (MGI:MGI:3711608|PMID:17450150) RGD PMID:17450150 MGI:MGI:3711608 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Cav3 caveolin 3 ISO MGI:MGI:2684578 (MGI:MGI:3849772|PMID:19535499) RGD PMID:19535499 MGI:MGI:3849772 NCBI chr 4:144,382,945...144,398,919
Ensembl chr 4:144,382,945...144,398,917
JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO MGI:MGI:3641051 (MGI:MGI:3774881|PMID:18256189) RGD PMID:18256189 MGI:MGI:3774881 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Hdac2 histone deacetylase 2 ISO MGI:MGI:3712002 (MGI:MGI:3711360|PMID:17322895) RGD PMID:17322895 MGI:MGI:3711360 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO MGI:MGI:2182095|MGI:MGI:5648110 (MGI:MGI:5648096|PMID:26039991) RGD PMID:26039991 MGI:MGI:5648096 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G LOC100911101 leucine-rich repeat-containing protein 10-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:60,099,105...60,100,385
Ensembl chr 7:60,099,120...60,100,517
JBrowse link
G Lrrc10 leucine-rich repeat-containing 10 ISO
IBA
MGI:MGI:3809940 (MGI:MGI:5484795|PMID:23236519)
PMID:21873635
RGD PMID:23236519, PMID:21873635 MGI:MGI:5484795, RGD:13792537 NCBI chr 7:60,087,361...60,088,758
Ensembl chr 7:60,087,429...60,088,250
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO MGI:MGI:3041135 (MGI:MGI:5529574|PMID:23994610) RGD PMID:23994610 MGI:MGI:5529574 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Mir208a microRNA 208a ISO MGI:MGI:3709980 (MGI:MGI:3708230|PMID:17379774) RGD PMID:17379774 MGI:MGI:3708230 NCBI chr15:33,613,451...33,613,533 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO MGI:MGI:3850506 (MGI:MGI:5632243|PMID:25139234) RGD PMID:25139234 MGI:MGI:5632243 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Sgcb sarcoglycan, beta ISO MGI:MGI:2153048 (MGI:MGI:1352919|PMID:10678176) RGD PMID:10678176 MGI:MGI:1352919 NCBI chr14:37,113,194...37,128,623
Ensembl chr14:37,113,210...37,128,737
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO MGI:MGI:4849923 (MGI:MGI:1927695|PMID:10967099), (MGI:MGI:4867054|PMID:21302256) RGD PMID:10967099, PMID:21302256 MGI:MGI:1927695, MGI:MGI:4867054 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
G Speg striated muscle enriched protein kinase ISO MGI:MGI:4830540 (MGI:MGI:4830240|PMID:19118250) RGD PMID:19118250 MGI:MGI:4830240 NCBI chr 9:82,571,333...82,628,684
Ensembl chr 9:82,571,269...82,628,709
JBrowse link
G Xirp1 xin actin-binding repeat containing 1 ISO MGI:MGI:3521795 (MGI:MGI:3775114|PMID:17766470) RGD PMID:17766470 MGI:MGI:3775114 NCBI chr 8:128,694,809...128,712,092
Ensembl chr 8:128,702,133...128,711,221
JBrowse link
cardiac muscle fiber development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxadr CXADR, Ig-like cell adhesion molecule ISO
ISS
MGI:MGI:3587803 (MGI:MGI:3587448|PMID:16079292)
GO_REF:0000024
RGD
UniProt
PMID:16079292 GO_REF:0000024, MGI:MGI:3587448 NCBI chr11:16,826,269...16,873,564
Ensembl chr11:16,826,399...16,873,562
JBrowse link
G Myh11 myosin heavy chain 11 IEA
ISO
GO_REF:0000107
(PMID:16444274)
Ensembl
RGD
PMID:16444274 GO_REF:0000107 NCBI chr10:764,421...859,184
Ensembl chr10:764,421...859,184
JBrowse link
G Myh6 myosin heavy chain 6 IEA
ISO
GO_REF:0000107
MGI:MGI:2182704|MGI:MGI:3652543|MGI:MGI:3664197 (MGI:MGI:1327483|PMID:9884344), (MGI:MGI:1333559|PMID:10066683), (MGI:MGI:3526615|PMID:15001446), (MGI:MGI:83539|PMID:8878443)
Ensembl
RGD
PMID:8878443, PMID:9884344, PMID:10066683, PMID:15001446 GO_REF:0000107, MGI:MGI:1327483, MGI:MGI:1333559, MGI:MGI:3526615, MGI:MGI:83539 NCBI chr15:33,605,653...33,629,730
Ensembl chr15:33,605,654...33,629,699
JBrowse link
G Myo18b myosin XVIIIb ISO MGI:MGI:3829997 (MGI:MGI:3821523|PMID:18761673) RGD PMID:18761673 MGI:MGI:3821523 NCBI chr12:49,761,100...49,979,745
Ensembl chr12:49,761,120...49,979,758
JBrowse link
G Sgcd sarcoglycan, delta ISO MGI:MGI:2180193 (MGI:MGI:5790783|PMID:23695275) RGD PMID:23695275 MGI:MGI:5790783 NCBI chr10:32,062,946...32,471,454
Ensembl chr10:32,062,946...32,471,454
JBrowse link
G Tcap titin-cap ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Ttn titin ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:63,565,160...63,837,815 JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:MGI:1931047 (MGI:MGI:1339868|PMID:10229225) RGD PMID:10229225 MGI:MGI:1339868 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:MGI:2180033 (MGI:MGI:2178865|PMID:11923874) RGD PMID:11923874 MGI:MGI:2178865 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
cardiac muscle thin filament assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neb nebulin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:37,658,081...37,855,843
Ensembl chr 3:37,658,563...37,854,561
JBrowse link
G Nebl nebulette ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:11822876), (PMID:18823973)
UniProt
RGD
PMID:11822876, PMID:18823973, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:84,141,014...84,247,038
Ensembl chr17:84,140,489...84,488,601
JBrowse link
G Nrap nebulin-related anchoring protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:277,104,519...277,181,397
Ensembl chr 1:277,104,514...277,181,414
JBrowse link
cardiac myofibril assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 ISO MGI:MGI:2180072 (MGI:MGI:87509|PMID:9114002) RGD PMID:9114002 MGI:MGI:87509 NCBI chr 3:105,507,403...105,512,939
Ensembl chr 3:105,507,403...105,512,939
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 ISO
IEA
(MGI:MGI:2447926|PMID:12507422)
GO_REF:0000107
RGD
Ensembl
PMID:12507422 GO_REF:0000107, MGI:MGI:2447926 NCBI chr 1:104,147,205...104,166,389
Ensembl chr 1:104,147,206...104,166,367
JBrowse link
G Fhod3 formin homology 2 domain containing 3 ISO
IBA
MGI:MGI:5440613 (MGI:MGI:5436289|PMID:23213483)
PMID:21873635
RGD PMID:23213483, PMID:21873635 MGI:MGI:5436289, RGD:13792537 NCBI chr18:16,650,786...17,332,209
Ensembl chr18:16,650,806...17,332,210
JBrowse link
G Myh10 myosin heavy chain 10 ISO
IEA
MGI:MGI:2386445 (MGI:MGI:1099556|PMID:9356462)
GO_REF:0000107
RGD
Ensembl
PMID:9356462 GO_REF:0000107, MGI:MGI:1099556 NCBI chr10:55,274,910...55,406,738
Ensembl chr10:55,275,411...55,406,732
JBrowse link
G Myl2 myosin light chain 2 ISO
IEA
MGI:MGI:2385922 (MGI:MGI:1194431|PMID:9422794)
GO_REF:0000107
RGD
Ensembl
PMID:9422794 GO_REF:0000107, MGI:MGI:1194431 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239
JBrowse link
G Mylk3 myosin light chain kinase 3 IMP
IBA
PMID:17885681
PMID:21873635
BHF-UCL
GO_Central
PMID:17885681, PMID:21873635 RGD:8554371, RGD:13792537 NCBI chr19:27,388,163...27,442,451
Ensembl chr19:27,404,712...27,441,536
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
UniProtKB:P05622 (MGI:MGI:1931346|PMID:11239463)
Ensembl
UniProt
RGD
PMID:11239463 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1931346 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO
ISS
UniProtKB:P26618 (MGI:MGI:1931346|PMID:11239463)
GO_REF:0000024
RGD
UniProt
PMID:11239463 GO_REF:0000024, MGI:MGI:1931346 NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
JBrowse link
G Srf serum response factor ISO MGI:MGI:3522206|MGI:MGI:3522214 (MGI:MGI:3513738|PMID:15569937) RGD PMID:15569937 MGI:MGI:3513738 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tcap titin-cap ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758, PMID:21873635 RGD:13792537 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
G Ttn titin ISO MGI:MGI:3654306 (MGI:MGI:3653555|PMID:16702235)
(PMID:11846417), (PMID:9817758)
RGD PMID:9817758, PMID:11846417, PMID:16702235 MGI:MGI:3653555 NCBI chr 3:63,565,160...63,837,815 JBrowse link
cardiac vascular smooth muscle cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO MGI:MGI:2447620 (MGI:MGI:4838384|PMID:20619341) RGD PMID:20619341 MGI:MGI:4838384 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:5298073|PMID:21311046) RGD PMID:21311046 MGI:MGI:5298073 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:MGI:4461879|PMID:18093989) RGD PMID:18093989 MGI:MGI:4461879 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A ISO MGI:MGI:104774 (MGI:MGI:2664013|PMID:12782680) RGD PMID:12782680 MGI:MGI:2664013 NCBI chr15:43,296,997...43,398,314
Ensembl chr15:43,298,794...43,392,451
JBrowse link
G Adra1b adrenoceptor alpha 1B ISO MGI:MGI:104773 (MGI:MGI:2664013|PMID:12782680) RGD PMID:12782680 MGI:MGI:2664013 NCBI chr10:29,392,762...29,450,644
Ensembl chr10:29,392,762...29,450,644
JBrowse link
G Agt angiotensinogen IDA RGD PMID:21376054 RGD:5129173 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:21173078 RGD:6903878 NCBI chr  X:119,389,480...119,393,845
Ensembl chr  X:119,390,013...119,393,842
JBrowse link
G Akap13 A-kinase anchoring protein 13 IMP RGD PMID:18951085 RGD:2312638 NCBI chr 1:137,089,558...137,315,272
Ensembl chr 1:137,014,272...137,315,272
JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 ISO (MGI:MGI:5920524|PMID:29065170) RGD PMID:29065170 MGI:MGI:5920524 NCBI chr15:28,103,688...28,121,494
Ensembl chr15:28,103,703...28,104,206
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta IMP RGD PMID:21554860 RGD:6907064 NCBI chr 2:230,900,907...231,132,207
Ensembl chr 2:230,901,126...231,132,039
JBrowse link
G Gata4 GATA binding protein 4 IDA RGD PMID:20971938 RGD:5131529 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IDA RGD PMID:27854077 RGD:13792737 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Map2k4 mitogen activated protein kinase kinase 4 IMP RGD PMID:9769323 RGD:7495831 NCBI chr10:52,196,121...52,301,887
Ensembl chr10:52,196,124...52,290,657
JBrowse link
G Myl2 myosin light chain 2 IEP RGD PMID:7657802 RGD:1580138 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239
JBrowse link
G Myocd myocardin IMP RGD PMID:18772130 RGD:5132877 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Nppa natriuretic peptide A IEP RGD PMID:7657802 RGD:1580138 NCBI chr 5:164,808,407...164,809,716
Ensembl chr 5:164,808,323...164,809,705
JBrowse link
G Nppb natriuretic peptide B IEP RGD PMID:7657802 RGD:1580138 NCBI chr 5:164,796,176...164,797,538
Ensembl chr 5:164,796,185...164,797,531
JBrowse link
G Pdlim5 PDZ and LIM domain 5 IGI PMID:24743145 BHF-UCL PMID:24743145 RGD:10054083 NCBI chr 2:247,815,214...247,989,198
Ensembl chr 2:247,818,243...247,988,462
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:19542178 RGD:7775063 NCBI chr 1:248,982,039...250,300,952 JBrowse link
G Sorbs2 sorbin and SH3 domain containing 2 IGI PMID:24743145 BHF-UCL PMID:24743145 RGD:10054083 NCBI chr16:49,626,205...49,820,223
Ensembl chr16:49,626,205...49,820,235
JBrowse link
endocardial cushion cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag1 jagged canonical Notch ligand 1 ISO
IEA
(MGI:MGI:4359139|PMID:19509466)
GO_REF:0000107
RGD
Ensembl
PMID:19509466 GO_REF:0000107, MGI:MGI:4359139 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
epicardium-derived cardiac fibroblast cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfbr3 transforming growth factor beta receptor 3 ISO (MGI:MGI:3818140|PMID:17704211) RGD PMID:17704211 MGI:MGI:3818140 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
epithelial to mesenchymal transition involved in cardiac fibroblast development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdcd4 programmed cell death 4 IGI PMID:23441172 BHF-UCL PMID:23441172 RGD:10400865 NCBI chr 1:274,616,625...274,648,204
Ensembl chr 1:274,625,224...274,648,204
JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 IGI PMID:23441172 BHF-UCL PMID:23441172 RGD:10400865 NCBI chr 2:124,400,689...124,405,331
Ensembl chr 2:124,400,679...124,405,331
JBrowse link
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad4 SMAD family member 4 ISO
IEA
(MGI:MGI:3689643|PMID:16151019)
GO_REF:0000107
RGD
Ensembl
PMID:16151019 GO_REF:0000107, MGI:MGI:3689643 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
negative regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 IMP RGD PMID:21170593 RGD:6784534 NCBI chr 4:144,382,945...144,398,919
Ensembl chr 4:144,382,945...144,398,917
JBrowse link
G Ctdp1 CTD phosphatase subunit 1 IMP RGD PMID:22569295 RGD:9686371 NCBI chr18:76,922,913...76,985,095
Ensembl chr18:76,922,934...76,984,203
JBrowse link
G Foxp1 forkhead box P1 IMP RGD PMID:26333362 RGD:11561912 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G G6pd glucose-6-phosphate dehydrogenase IMP RGD PMID:24190878 RGD:10449133 NCBI chr  X:156,274,800...156,293,935
Ensembl chr  X:156,274,800...156,293,926
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha ISO (MGI:MGI:4829580|PMID:20516643) RGD PMID:20516643 MGI:MGI:4829580 NCBI chr 1:82,097,244...82,108,238
Ensembl chr 1:82,097,247...82,108,203
JBrowse link
G Mir451a microRNA 451a IMP RGD PMID:25209900 RGD:11558015 NCBI chr10:65,291,204...65,291,275
Ensembl chr10:65,291,204...65,291,275
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 IMP RGD PMID:22082674 RGD:11533929 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Pi16 peptidase inhibitor 16 ISO (MGI:MGI:3810223|PMID:17909105) RGD PMID:17909105 MGI:MGI:3810223 NCBI chr20:6,923,176...6,932,786
Ensembl chr20:6,923,489...6,932,786
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha IMP RGD PMID:22198280 RGD:5687133 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G Rgs2 regulator of G-protein signaling 2 IMP RGD PMID:16380388 RGD:13524577 NCBI chr13:60,846,458...60,849,061
Ensembl chr13:60,846,308...60,849,094
JBrowse link
G Rgs4 regulator of G-protein signaling 4 IDA RGD PMID:9918533 RGD:7207376 NCBI chr13:88,054,817...88,061,108
Ensembl chr13:88,054,817...88,061,108
JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 IMP RGD PMID:25022898 RGD:13464131 NCBI chr11:45,477,053...45,511,409
Ensembl chr11:45,480,250...45,510,961
JBrowse link
G Yy1 YY1 transcription factor IMP RGD PMID:18632988 RGD:9588273 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
G Zfp418 zinc finger protein 418 ISO (MGI:MGI:5920524|PMID:29065170) RGD PMID:29065170 MGI:MGI:5920524 NCBI chr 1:69,615,413...69,629,997
Ensembl chr 1:69,615,434...69,629,913
JBrowse link
positive regulation of cardiac muscle fiber development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
ISS
IEA
(PMID:20702560)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:20702560 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
positive regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 IMP RGD PMID:18194989 RGD:5129139 NCBI chr 1:277,537,585...277,538,985
Ensembl chr 1:277,537,585...277,538,985
JBrowse link
G Akap6 A-kinase anchoring protein 6 IMP
IDA
RGD PMID:21550986, PMID:16306226 RGD:6902940, RGD:2312613 NCBI chr 6:73,553,111...73,991,992
Ensembl chr 6:73,553,210...73,990,534
JBrowse link
G Ccn4 cellular communication network factor 4 IMP RGD PMID:21376054 RGD:5129173 NCBI chr 7:107,695,227...107,723,759
Ensembl chr 7:107,695,215...107,723,772
JBrowse link
G Ddx39b DExD-box helicase 39B IMP RGD PMID:20116367 RGD:10401141 NCBI chr20:4,806,103...4,818,600
Ensembl chr20:4,806,108...4,818,568
JBrowse link
G Edn1 endothelin 1 ISO RNAcentral:URS000006FDD4_9606|RNAcentral:URS000013D17D_9606 (PMID:24117217) RGD PMID:24117217 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Ep300 E1A binding protein p300 IMP RGD PMID:12724418 RGD:2312280 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Fdps farnesyl diphosphate synthase IMP RGD PMID:19716825 RGD:2316294 NCBI chr 2:188,403,595...188,413,219
Ensembl chr 2:188,392,858...188,413,219
JBrowse link
G Hamp hepcidin antimicrobial peptide IMP RGD PMID:24424338 RGD:11041632 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Igf1 insulin-like growth factor 1 ISO
IEA
RNAcentral:URS000006FDD4_9606|RNAcentral:URS000013D17D_9606 (PMID:24117217)
GO_REF:0000107
RGD
Ensembl
PMID:24117217 GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21318349, PMID:21933187 RGD:10040977, RGD:10040978 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IMP RGD PMID:22989630 RGD:7174736 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 IMP RGD PMID:23261455 RGD:13514044 NCBI chr15:27,739,416...27,749,650
Ensembl chr15:27,739,251...27,749,648
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 IMP RGD PMID:23487407 RGD:8693424 NCBI chr 8:21,669,236...21,680,615
Ensembl chr 8:21,669,236...21,680,615
JBrowse link
G Sirt1 sirtuin 1 IMP RGD PMID:25281201 RGD:13514043 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Slc25a4 solute carrier family 25 member 4 IDA RGD PMID:21325829 RGD:9681466 NCBI chr16:49,266,903...49,270,698
Ensembl chr16:49,266,903...49,270,698
JBrowse link
G Trip10 thyroid hormone receptor interactor 10 IMP RGD PMID:23915320 RGD:11535145 NCBI chr 9:9,689,214...9,702,353
Ensembl chr 9:9,689,475...9,702,306
JBrowse link
regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col14a1 collagen type XIV alpha 1 chain ISO MGI:MGI:3846440 (MGI:MGI:5444801|PMID:22906538) RGD PMID:22906538 MGI:MGI:5444801 NCBI chr 7:95,054,877...95,274,073
Ensembl chr 7:95,074,236...95,273,298
JBrowse link
sinoatrial node cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bves blood vessel epicardial substance ISO MGI:MGI:2385915 (MGI:MGI:5424322|PMID:22354168) RGD PMID:22354168 MGI:MGI:5424322 NCBI chr20:50,439,885...50,474,678
Ensembl chr20:50,439,883...50,474,678
JBrowse link
G Popdc2 popeye domain containing 2 ISO MGI:MGI:3773727 (MGI:MGI:5424322|PMID:22354168) RGD PMID:22354168 MGI:MGI:5424322 NCBI chr11:64,915,041...64,954,704
Ensembl chr11:64,936,692...64,952,687
JBrowse link
G Tbx3 T-box transcription factor 3 ISO MGI:MGI:3710254 (MGI:MGI:4366226|PMID:19096026) RGD PMID:19096026 MGI:MGI:4366226 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
ventricular cardiac muscle cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 ISO
IEA
MGI:MGI:3050453|MGI:MGI:3663625 (MGI:MGI:3711608|PMID:17450150)
GO_REF:0000107
RGD
Ensembl
PMID:17450150 GO_REF:0000107, MGI:MGI:3711608 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Bmp10 bone morphogenetic protein 10 ISO
IEA
(MGI:MGI:3695247|PMID:16798733)
GO_REF:0000107
RGD
Ensembl
PMID:16798733 GO_REF:0000107, MGI:MGI:3695247 NCBI chr 4:119,224,906...119,230,534
Ensembl chr 4:119,225,040...119,230,728
JBrowse link
G Ccnb1 cyclin B1 IEP RGD PMID:15253691 RGD:2301353 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEP RGD PMID:15253691 RGD:2301353 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G Fhl2 four and a half LIM domains 2 ISO (PMID:15509787) RGD PMID:15509787 NCBI chr 9:49,920,611...49,994,906
Ensembl chr 9:49,920,854...49,950,093
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO (MGI:MGI:3784153|PMID:17332425) RGD PMID:17332425 MGI:MGI:3784153 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Lmna lamin A/C ISO
IEA
MGI:MGI:2177930 (MGI:MGI:3027329|PMID:14755333)
GO_REF:0000107
RGD
Ensembl
PMID:14755333 GO_REF:0000107, MGI:MGI:3027329 NCBI chr 2:187,842,884...187,863,552
Ensembl chr 2:187,842,885...187,863,516
JBrowse link
G Myh10 myosin heavy chain 10 ISO
IEA
MGI:MGI:2386445|MGI:MGI:3052104 (MGI:MGI:3052228|PMID:12893741)
GO_REF:0000107
RGD
Ensembl
PMID:12893741 GO_REF:0000107, MGI:MGI:3052228 NCBI chr10:55,274,910...55,406,738
Ensembl chr10:55,275,411...55,406,732
JBrowse link
G Nkx2-6 NK2 homeobox 6 ISO (PMID:9621431) RGD PMID:9621431 NCBI chr15:51,034,620...51,038,715
Ensembl chr15:51,034,620...51,038,704
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO MGI:MGI:1857844|MGI:MGI:2386742 (MGI:MGI:3841866|PMID:18292603) RGD PMID:18292603 MGI:MGI:3841866 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
ventricular cardiac myofibril assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2a myocyte enhancer factor 2a IEA
ISO
GO_REF:0000107
(MGI:MGI:2429350|PMID:12379849)
Ensembl
RGD
PMID:12379849 GO_REF:0000107, MGI:MGI:2429350 NCBI chr 1:128,207,715...128,341,681
Ensembl chr 1:128,209,971...128,341,263
JBrowse link
G Nkx2-5 NK2 homeobox 5 ISO
IEA
MGI:MGI:3042511 (MGI:MGI:4355491|PMID:19546853)
GO_REF:0000107
RGD
Ensembl
PMID:19546853 GO_REF:0000107, MGI:MGI:4355491 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:MGI:3830437 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    cellular process 18800
      cellular developmental process 4459
        cell development 2440
          cardiac cell development 106
            His-Purkinje system cell development 0
            cardiac fibroblast cell development + 3
            cardiac glial cell development + 0
            cardiac muscle cell development + 101
            cardiac neuron development 0
            cardiac vascular smooth muscle cell development + 3
            endocardial cell development 0
            endocardial cushion cell development 1
Path 2
Term Annotations click to browse term
  biological_process 20028
    developmental process 6827
      anatomical structure development 6269
        multicellular organism development 5744
          system development 5280
            animal organ development 4035
              heart development 687
                cardiocyte differentiation 180
                  cardiac cell development 106
                    His-Purkinje system cell development 0
                    cardiac fibroblast cell development + 3
                    cardiac glial cell development + 0
                    cardiac muscle cell development + 101
                    cardiac neuron development 0
                    cardiac vascular smooth muscle cell development + 3
                    endocardial cell development 0
                    endocardial cushion cell development 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.