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ONTOLOGY REPORT - ANNOTATIONS


Term:cardiac muscle cell differentiation
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Accession:GO:0055007 term browser browse the term
Definition:The process in which a cardiac muscle precursor cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.
Synonyms:exact_synonym: cardiomyocyte differentiation
 related_synonym: heart muscle cell differentiation


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cardiac muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link NW_004955423 17,173,648 17,199,189 RGD:9068941
G Akap13 A-kinase anchoring protein 13 JBrowse link NW_004955416 19,006,206 19,327,523 RGD:9068941
G Arid1a AT-rich interaction domain 1A JBrowse link NW_004955452 6,068,631 6,120,759 RGD:9068941
G Bmp2 bone morphogenetic protein 2 JBrowse link NW_004955415 17,048,374 17,058,172 RGD:9068941
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
G Cacybp calcyclin binding protein JBrowse link NW_004955406 14,823,509 14,840,127 RGD:9068941
G Calr calreticulin JBrowse link NW_004955415 31,985,147 31,989,372 RGD:9068941
G Cby1 chibby family member 1, beta catenin antagonist JBrowse link NW_004955413 24,781,102 24,794,537 RGD:9068941
G Ift20 intraflagellar transport 20 JBrowse link NW_004955481 4,799,548 4,807,751 RGD:9068941
G Itgb1 integrin subunit beta 1 JBrowse link NW_004955462 4,454,809 4,483,227 RGD:9068941
G Kdm6b lysine demethylase 6B JBrowse link NW_004955467 9,085,239 9,106,658 RGD:9068941
G Myocd myocardin JBrowse link NW_004955467 4,653,065 4,743,438 RGD:9068941
G Nkx2-5 NK2 homeobox 5 JBrowse link NW_004955408 25,833,649 25,836,673 RGD:9068941
G Nox4 NADPH oxidase 4 JBrowse link NW_004955414 4,062,337 4,220,032 RGD:9068941
G Nrg1 neuregulin 1 JBrowse link NW_004955463 8,009,436 9,037,116 RGD:9068941
G Sik1 salt inducible kinase 1 JBrowse link NW_004955407 38,739,062 38,749,293 RGD:9068941
G Slc9a1 solute carrier family 9 member A1 JBrowse link NW_004955452 6,409,833 6,467,841 RGD:9068941
G Sox6 SRY-box transcription factor 6 JBrowse link NW_004955414 30,965,626 31,532,473 RGD:9068941
G Tbx5 T-box transcription factor 5 JBrowse link NW_004955455 16,133,130 16,217,894 RGD:9068941
G Tsc1 TSC complex subunit 1 JBrowse link NW_004955513 2,197,037 2,244,992 RGD:9068941
atrial cardiac muscle cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fhl2 four and a half LIM domains 2 JBrowse link NW_004955470 10,240,117 10,286,117 RGD:9068941
G Nkx2-5 NK2 homeobox 5 JBrowse link NW_004955408 25,833,649 25,836,673 RGD:9068941
G Nkx2-6 NK2 homeobox 6 JBrowse link NW_004955403 46,831,758 46,836,358 RGD:9068941
atrioventricular bundle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tbx3 T-box transcription factor 3 JBrowse link NW_004955455 15,988,153 16,000,156 RGD:9068941
atrioventricular node cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Maml1 mastermind like transcriptional coactivator 1 JBrowse link NW_004955408 802,277 850,218 RGD:9068941
G Nkx2-5 NK2 homeobox 5 JBrowse link NW_004955408 25,833,649 25,836,673 RGD:9068941
atrioventricular node cell fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx2-5 NK2 homeobox 5 JBrowse link NW_004955408 25,833,649 25,836,673 RGD:9068941
canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt3a Wnt family member 3A JBrowse link NW_004955581 351,375 382,541 RGD:9068941
G Wnt8a Wnt family member 8A JBrowse link NW_004955418 2,332,636 2,338,099 RGD:9068941
cardiac muscle cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn2 actinin alpha 2 JBrowse link NW_004955492 3,483,704 3,554,831 RGD:9068941
G Alpk2 alpha kinase 2 JBrowse link NW_004955402 42,749,005 42,871,756 RGD:9068941
G Alpk3 alpha kinase 3 JBrowse link NW_004955416 14,279,831 14,322,836 RGD:9068941
G Cav3 caveolin 3 JBrowse link NW_004955561 326,008 335,911 RGD:9068941
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link NW_004955406 8,000,269 8,021,554 RGD:9068941
G Lrrc10 leucine rich repeat containing 10 JBrowse link NW_004955405 9,908,866 9,910,375 RGD:9068941
G Mtor mechanistic target of rapamycin kinase JBrowse link NW_004955486 2,487,642 2,599,694 RGD:9068941
G Sgcb sarcoglycan beta JBrowse link NW_004955447 18,459,562 18,472,367 RGD:9068941
G Slc8a1 solute carrier family 8 member A1 JBrowse link NW_004955441 7,653,107 8,037,784 RGD:9068941
cardiac muscle cell fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvr1 activin A receptor type 1 JBrowse link NW_004955449 15,587,958 15,706,432 RGD:9068941
G Tbx3 T-box transcription factor 3 JBrowse link NW_004955455 15,988,153 16,000,156 RGD:9068941
G Wt1 WT1 transcription factor JBrowse link NW_004955476 10,464,688 10,504,473 RGD:9068941
cardiac muscle fiber development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cxadr CXADR Ig-like cell adhesion molecule JBrowse link NW_004955407 18,894,853 18,927,129 RGD:9068941
G Myh11 myosin heavy chain 11 JBrowse link NW_004955442 528,317 644,252 RGD:9068941
G Myo18b myosin XVIIIB JBrowse link NW_004955455 437,308 696,161 RGD:9068941
G Myom1 myomesin 1 JBrowse link NW_004955402 7,293,415 7,418,226 RGD:9068941
G Myom2 myomesin 2 JBrowse link NW_004955403 57,718,120 57,783,338 RGD:9068941
G Myom3 myomesin 3 JBrowse link NW_004955452 3,925,373 3,968,721 RGD:9068941
G Sgcd sarcoglycan delta JBrowse link NW_004955408 10,273,344 10,820,108 RGD:9068941
G Tcap titin-cap JBrowse link NW_004955451 14,413,657 14,414,735 RGD:9068941
G Ttn titin JBrowse link NW_004955403 18,057,344 18,328,389 RGD:9068941
G Vegfa vascular endothelial growth factor A JBrowse link NW_004955437 9,527,445 9,541,908 RGD:9068941
G Zmpste24 zinc metallopeptidase STE24 JBrowse link NW_004955537 82,724 134,609 RGD:9068941
cardiac muscle thin filament assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Neb nebulin JBrowse link NW_004955440 17,060,303 17,259,558 RGD:9068941
G Nebl nebulette JBrowse link NW_004955429 7,559,994 7,730,683 RGD:9068941
G Nrap nebulin related anchoring protein JBrowse link NW_004955431 18,604,508 18,669,853 RGD:9068941
cardiac myofibril assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actc1 actin alpha cardiac muscle 1 JBrowse link NW_004955416 2,139,541 2,144,678 RGD:9068941
G Csrp3 cysteine and glycine rich protein 3 JBrowse link NW_004955476 155,913 176,122 RGD:9068941
G Fhod3 formin homology 2 domain containing 3 JBrowse link NW_004955402 22,822,060 23,277,993 RGD:9068941
G Myh10 myosin heavy chain 10 JBrowse link NW_004955467 8,298,514 8,427,459 RGD:9068941
G Myl2 myosin light chain 2 JBrowse link NW_004955482 7,708,436 7,713,877 RGD:9068941
G Mylk3 myosin light chain kinase 3 JBrowse link NW_004955448 254,280 287,451 RGD:9068941
G Myom1 myomesin 1 JBrowse link NW_004955402 7,293,415 7,418,226 RGD:9068941
G Myom2 myomesin 2 JBrowse link NW_004955403 57,718,120 57,783,338 RGD:9068941
G Myom3 myomesin 3 JBrowse link NW_004955452 3,925,373 3,968,721 RGD:9068941
G Obsl1 obscurin like cytoskeletal adaptor 1 JBrowse link NW_004955453 13,905,992 13,932,652 RGD:9068941
G Pdgfra platelet derived growth factor receptor alpha JBrowse link NW_004955447 16,570,652 16,613,410 RGD:9068941
G Pdgfrb platelet derived growth factor receptor beta JBrowse link NW_004955415 4,365,848 4,403,317 RGD:9068941
G Srf serum response factor JBrowse link NW_004955437 9,100,546 9,109,305 RGD:9068941
G Tcap titin-cap JBrowse link NW_004955451 14,413,657 14,414,735 RGD:9068941
G Ttn titin JBrowse link NW_004955403 18,057,344 18,328,389 RGD:9068941
cell growth involved in cardiac muscle cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adra1a adrenoceptor alpha 1A JBrowse link NW_004955403 49,394,173 49,485,881 RGD:9068941
G Agt angiotensinogen JBrowse link NW_004955492 7,863,662 7,874,863 RGD:9068941
G Agtr2 angiotensin II receptor type 2 JBrowse link NW_004955534 3,653,112 3,654,248 RGD:9068941
G Akap13 A-kinase anchoring protein 13 JBrowse link NW_004955416 19,006,206 19,327,523 RGD:9068941
G Gata4 GATA binding protein 4 JBrowse link NW_004955403 52,958,318 53,029,267 RGD:9068941
G Map2k4 mitogen-activated protein kinase kinase 4 JBrowse link NW_004955467 5,188,036 5,295,570 RGD:9068941
G Nppa natriuretic peptide A JBrowse link NW_004955486 2,061,196 2,062,805 RGD:9068941
G Pdlim5 PDZ and LIM domain 5 JBrowse link NW_004955405 5,109,778 5,312,192 RGD:9068941
G Sorbs2 sorbin and SH3 domain containing 2 JBrowse link NW_004955403 23,295,887 23,503,654 RGD:9068941
negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 JBrowse link NW_004955425 7,353,964 7,357,599 RGD:9068941
negative regulation of cardiac muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp2 bone morphogenetic protein 2 JBrowse link NW_004955415 17,048,374 17,058,172 RGD:9068941
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 JBrowse link NW_004955425 7,353,964 7,357,599 RGD:9068941
G Dll1 delta like canonical Notch ligand 1 JBrowse link NW_004955411 3,478,943 3,486,541 RGD:9068941
G Frs2 fibroblast growth factor receptor substrate 2 JBrowse link NW_004955405 9,785,857 9,884,220 RGD:9068941
G Fzd7 frizzled class receptor 7 JBrowse link NW_004955457 12,729,277 12,733,057 RGD:9068941
G Sox6 SRY-box transcription factor 6 JBrowse link NW_004955414 30,965,626 31,532,473 RGD:9068941
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smad4 SMAD family member 4 JBrowse link NW_004955402 35,956,080 36,001,746 RGD:9068941
negative regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cav3 caveolin 3 JBrowse link NW_004955561 326,008 335,911 RGD:9068941
G Ctdp1 CTD phosphatase subunit 1 JBrowse link NW_004955402 62,817,822 62,914,250 RGD:9068941
G G6pd glucose-6-phosphate dehydrogenase JBrowse link NW_004955580 1,045,294 1,058,129 RGD:9068941
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link NW_004955555 668,641 676,351 RGD:9068941
G Pak1 p21 (RAC1) activated kinase 1 JBrowse link NW_004955414 14,365,325 14,447,470 RGD:9068941
G Pi16 peptidase inhibitor 16 JBrowse link NW_004955437 6,066,685 6,075,077 RGD:9068941
G Ppara peroxisome proliferator activated receptor alpha JBrowse link NW_004955413 30,306,563 30,366,245 RGD:9068941
G Rgs2 regulator of G protein signaling 2 JBrowse link NW_004955406 30,261,757 30,265,389 RGD:9068941
G Rgs4 regulator of G protein signaling 4 JBrowse link NW_004955462 13,340,812 13,347,598 RGD:9068941
G Yy1 YY1 transcription factor JBrowse link NW_004955438 21,341,374 21,377,674 RGD:9068941
positive regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link NW_004955443 18,783,061 19,029,441 RGD:9068941
positive regulation of cardiac muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arrb2 arrestin beta 2 JBrowse link NW_004955467 10,109,985 10,118,687 RGD:9068941
G Efnb2 ephrin B2 JBrowse link NW_004955404 5,000,906 5,030,068 RGD:9068941
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link NW_004955416 1,812,725 1,825,528 RGD:9068941
G Kat2a lysine acetyltransferase 2A JBrowse link NW_004955451 16,192,228 16,197,103 RGD:9068941
G Mef2c myocyte enhancer factor 2C JBrowse link NW_004955418 22,537,388 22,701,434 RGD:9068941
G Myocd myocardin JBrowse link NW_004955467 4,653,065 4,743,438 RGD:9068941
G Nrg1 neuregulin 1 JBrowse link NW_004955463 8,009,436 9,037,116 RGD:9068941
G Tgfb1 transforming growth factor beta 1 JBrowse link NW_004955555 274,405 288,441 RGD:9068941
G Wnt3a Wnt family member 3A JBrowse link NW_004955581 351,375 382,541 RGD:9068941
positive regulation of cardiac muscle fiber development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
positive regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap6 A-kinase anchoring protein 6 JBrowse link NW_004955409 28,067,814 28,516,881 RGD:9068941
G Ddx39b DExD-box helicase 39B JBrowse link NW_004955437 72,835 84,045 RGD:9068941
G Edn1 endothelin 1 JBrowse link NW_004955465 2,287,906 2,314,945 RGD:9068941
G Hamp hepcidin antimicrobial peptide JBrowse link NW_004955468 4,576,080 4,577,591 RGD:9068941
G Igf1 insulin like growth factor 1 JBrowse link NW_004955405 37,505,830 37,582,152 RGD:9068941
G Mtor mechanistic target of rapamycin kinase JBrowse link NW_004955486 2,487,642 2,599,694 RGD:9068941
G Parp2 poly(ADP-ribose) polymerase 2 JBrowse link NW_004955550 1,138,976 1,152,293 RGD:9068941
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 JBrowse link NW_004955495 1,250,557 1,261,617 RGD:9068941
Purkinje myocyte differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx2-5 NK2 homeobox 5 JBrowse link NW_004955408 25,833,649 25,836,673 RGD:9068941
sinoatrial node cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bves blood vessel epicardial substance JBrowse link NW_004955411 30,517,917 30,548,424 RGD:9068941
G Tbx3 T-box transcription factor 3 JBrowse link NW_004955455 15,988,153 16,000,156 RGD:9068941
ventricular cardiac muscle cell development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Bmp10 bone morphogenetic protein 10 JBrowse link NW_004955424 16,124,526 16,130,723 RGD:9068941
G Ccnb1 cyclin B1 JBrowse link NW_004955446 140,661 149,500 RGD:9068941
G Cdk1 cyclin dependent kinase 1 JBrowse link NW_004955425 14,210,681 14,226,474 RGD:9068941
G Fhl2 four and a half LIM domains 2 JBrowse link NW_004955470 10,240,117 10,286,117 RGD:9068941
G Hey2 hes related family bHLH transcription factor with YRPW motif 2 JBrowse link NW_004955436 7,060,930 7,070,610 RGD:9068941
G Lmna lamin A/C JBrowse link NW_004955545 2,290,076 2,310,982 RGD:9068941
G Myh10 myosin heavy chain 10 JBrowse link NW_004955467 8,298,514 8,427,459 RGD:9068941
G Nkx2-5 NK2 homeobox 5 JBrowse link NW_004955408 25,833,649 25,836,673 RGD:9068941
G Nkx2-6 NK2 homeobox 6 JBrowse link NW_004955403 46,831,758 46,836,358 RGD:9068941
ventricular cardiac muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mef2c myocyte enhancer factor 2C JBrowse link NW_004955418 22,537,388 22,701,434 RGD:9068941
G Myocd myocardin JBrowse link NW_004955467 4,653,065 4,743,438 RGD:9068941
G Nrg1 neuregulin 1 JBrowse link NW_004955463 8,009,436 9,037,116 RGD:9068941
G Rara retinoic acid receptor alpha JBrowse link NW_004955451 14,876,663 14,917,134 RGD:9068941
G Rarb retinoic acid receptor beta JBrowse link NW_004955430 17,067,536 17,457,558 RGD:9068941
G Rxra retinoid X receptor alpha JBrowse link NW_004955513 3,313,544 3,386,544 RGD:9068941
ventricular cardiac myofibril assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mef2a myocyte enhancer factor 2A JBrowse link NW_004955416 26,926,753 27,051,171 RGD:9068941
G Nkx2-5 NK2 homeobox 5 JBrowse link NW_004955408 25,833,649 25,836,673 RGD:9068941
G Prox1 prospero homeobox 1 JBrowse link NW_004955406 3,715,140 3,770,019 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14546
    developmental process 5877
      cellular developmental process 4025
        cell differentiation 3848
          cardiocyte differentiation 141
            cardiac muscle cell differentiation 109
              His-Purkinje system cell differentiation + 2
              atrial cardiac muscle cell differentiation + 3
              cardiac muscle cell development + 74
              cardiac muscle cell fate commitment + 8
              cardiac pacemaker cell differentiation + 4
              negative regulation of cardiac muscle cell differentiation + 17
              positive regulation of cardiac muscle cell differentiation + 19
              regulation of cardiac muscle cell differentiation + 36
              ventricular cardiac muscle cell differentiation + 18
Path 2
Term Annotations click to browse term
  biological_process 14546
    developmental process 5877
      anatomical structure development 5446
        multicellular organism development 4996
          system development 4466
            animal organ development 3279
              heart development 552
                cardiac muscle tissue development 205
                  cardiac muscle cell differentiation 109
                    His-Purkinje system cell differentiation + 2
                    atrial cardiac muscle cell differentiation + 3
                    cardiac muscle cell development + 74
                    cardiac muscle cell fate commitment + 8
                    cardiac pacemaker cell differentiation + 4
                    negative regulation of cardiac muscle cell differentiation + 17
                    positive regulation of cardiac muscle cell differentiation + 19
                    regulation of cardiac muscle cell differentiation + 36
                    ventricular cardiac muscle cell differentiation + 18
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.