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ONTOLOGY REPORT - ANNOTATIONS


Term:recycling endosome
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Accession:GO:0055037 term browser browse the term
Definition:An organelle consisting of a network of tubules that functions in targeting molecules, such as receptors transporters and lipids, to the plasma membrane.
Synonyms:exact_synonym: endosomal recycling compartment
 related_synonym: ERC;   endosome recycling compartment


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recycling endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCG1 ATP binding cassette subfamily G member 1 JBrowse link 13 205,561,897 205,628,428 RGD:14298760
G APP amyloid beta precursor protein JBrowse link 13 189,434,854 189,716,120 RGD:14298760
G AQP2 aquaporin 2 JBrowse link 5 15,862,739 15,868,565 RGD:14298760
G ATP11A ATPase phospholipid transporting 11A JBrowse link 11 78,292,734 78,402,108 RGD:14298760
G ATP11B ATPase phospholipid transporting 11B (putative) JBrowse link 13 120,727,633 120,873,907 RGD:14298760
G ATP11C ATPase phospholipid transporting 11C JBrowse link X 114,394,436 114,575,658 RGD:14298760
G AVL9 AVL9 cell migration associated JBrowse link 18 40,663,728 40,739,115 RGD:14298760
G BACE1 beta-secretase 1 JBrowse link 9 44,640,389 44,665,863 RGD:14298760
G CD22 CD22 molecule JBrowse link 6 44,820,593 44,834,392 RGD:14298760
G CFTR CF transmembrane conductance regulator JBrowse link 18 28,627,717 28,818,209 RGD:14298760
G COMMD1 copper metabolism domain containing 1 JBrowse link 3 79,770,315 79,913,969 RGD:14298760
G DENND6A DENN domain containing 6A JBrowse link 13 39,456,957 39,524,110 RGD:14298760
G DENND6B DENN domain containing 6B JBrowse link 5 376,556 389,334 RGD:14298760
G DYNC1I1 dynein cytoplasmic 1 intermediate chain 1 JBrowse link 9 75,414,663 75,760,527 RGD:14298760
G ENTR1 endosome associated trafficking regulator 1 RGD:14298760
G FCHSD1 FCH and double SH3 domains 1 JBrowse link 2 143,289,854 143,301,921 RGD:14298760
G FCHSD2 FCH and double SH3 domains 2 JBrowse link 9 7,366,516 7,619,960 RGD:14298760
G GPER1 G protein-coupled estrogen receptor 1 JBrowse link 3 711,427 715,982 RGD:14298760
G GPR161 G protein-coupled receptor 161 JBrowse link 4 82,844,944 82,909,329 RGD:14298760
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 16 69,332,786 69,654,366 RGD:14298760
G HFE homeostatic iron regulator JBrowse link 7 20,758,604 20,767,004 RGD:14298760
G INPP5F inositol polyphosphate-5-phosphatase F JBrowse link 14 129,577,594 129,671,541 RGD:14298760
G ITGB1 integrin subunit beta 1 JBrowse link 10 56,078,393 56,130,608 RGD:14298760
G LDLRAP1 low density lipoprotein receptor adaptor protein 1 JBrowse link 6 83,030,629 83,054,387 RGD:14298760
G LMTK2 lemur tyrosine kinase 2 JBrowse link 3 5,322,238 5,409,223 RGD:14298760
G MCOLN2 mucolipin 2 JBrowse link 6 128,772,904 128,836,958 RGD:14298760
G MICALL2 MICAL like 2 JBrowse link 3 951,330 971,129 RGD:14298760
G MLC1 modulator of VRAC current 1 JBrowse link 5 571,921 593,531 RGD:14298760
G MYO5A myosin VA JBrowse link 1 119,165,751 119,398,591 RGD:14298760
G NCK2 NCK adaptor protein 2 JBrowse link 3 49,063,813 49,222,274 RGD:14298760
G PHETA1 PH domain containing endocytic trafficking adaptor 1 JBrowse link 14 32,585,108 32,600,708 RGD:14298760
G PHETA2 PH domain containing endocytic trafficking adaptor 2 JBrowse link 5 6,571,628 6,576,993 RGD:14298760
G PLEKHJ1 pleckstrin homology domain containing J1 JBrowse link 2 76,402,453 76,405,170 RGD:14298760
G RAB10 RAB10, member RAS oncogene family JBrowse link 3 112,842,190 112,924,188 RGD:14298760
G RAB11A RAB11A, member RAS oncogene family JBrowse link 1 163,858,254 163,887,741 RGD:14298760
G RAB11B RAB11B, member RAS oncogene family JBrowse link 2 70,884,457 70,896,169 RGD:14298760
G RAB14 RAB14, member RAS oncogene family JBrowse link 1 261,228,112 261,256,913 RGD:14298760
G RAB25 RAB25, member RAS oncogene family JBrowse link 4 93,961,136 93,970,742 RGD:14298760
G RAB29 RAB29, member RAS oncogene family JBrowse link 9 66,448,854 66,458,766 RGD:14298760
G RASSF9 Ras association domain family member 9 JBrowse link 5 96,296,580 96,341,751 RGD:14298760
G RELCH RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing JBrowse link 1 159,207,951 159,317,675 RGD:14298760
G SLC11A2 solute carrier family 11 member 2 RGD:14298760
G SLC31A1 solute carrier family 31 member 1 JBrowse link 1 253,868,389 253,893,135 RGD:14298760
G SLC31A2 solute carrier family 31 member 2 JBrowse link 1 253,795,005 253,805,287 RGD:14298760
G SLC9A6 solute carrier family 9 member A6 JBrowse link X 111,176,461 111,233,108 RGD:14298760
G SLC9A7 solute carrier family 9 member A7 JBrowse link X 41,233,308 41,399,032 RGD:14298760
G SLC9A9 solute carrier family 9 member A9 JBrowse link 13 83,962,613 84,636,878 RGD:14298760
G SNF8 SNF8 subunit of ESCRT-II JBrowse link 12 25,142,748 25,152,847 RGD:14298760
G SORL1 sortilin related receptor 1 JBrowse link 9 48,435,350 48,653,670 RGD:14298760
G ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 JBrowse link 7 86,450,302 86,514,232 RGD:14298760
G STX8 syntaxin 8 JBrowse link 12 54,296,988 54,544,668 RGD:14298760
G SYT11 synaptotagmin 11 JBrowse link 4 94,139,345 94,163,091 RGD:14298760
G TBC1D12 TBC1 domain family member 12 JBrowse link 14 105,806,384 105,919,986 RGD:14298760
G TBC1D14 TBC1 domain family member 14 JBrowse link 8 3,833,314 3,918,783 RGD:14298760
G TFRC transferrin receptor JBrowse link 13 133,976,765 133,997,554 RGD:14298760
G TNF tumor necrosis factor JBrowse link 7 23,699,635 23,702,393 RGD:14298760
G TPP1 tripeptidyl peptidase 1 JBrowse link 9 3,135,580 3,143,408 RGD:14298760
G TUBG1 tubulin gamma 1 RGD:14298760
G VAMP8 vesicle associated membrane protein 8 JBrowse link 3 59,187,900 59,193,165 RGD:14298760
G VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog JBrowse link 7 100,482,953 100,510,164 RGD:14298760
G VPS16 VPS16 core subunit of CORVET and HOPS complexes JBrowse link 17 32,803,596 32,825,974 RGD:14298760
G WASHC1 WASH complex subunit 1 JBrowse link 5 67,395,737 67,412,408 RGD:14298760
EARP complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G VPS50 VPS50 subunit of EARP/GARPII complex JBrowse link 9 73,074,878 73,215,833 RGD:14298760
G VPS51 VPS51 subunit of GARP complex JBrowse link 2 7,081,607 7,094,898 RGD:14298760
G VPS52 VPS52 subunit of GARP complex JBrowse link 7 29,624,224 29,639,168 RGD:14298760
postsynaptic recycling endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GRIPAP1 GRIP1 associated protein 1 JBrowse link X 43,043,613 43,070,363 RGD:14298760
G RAB11A RAB11A, member RAS oncogene family JBrowse link 1 163,858,254 163,887,741 RGD:14298760
G RAB4A RAB4A, member RAS oncogene family JBrowse link 14 60,481,484 60,528,549 RGD:14298760
G STX12 syntaxin 12 JBrowse link 6 84,918,827 84,960,235 RGD:14298760
recycling endosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABHD17B abhydrolase domain containing 17B, depalmitoylase JBrowse link 1 225,149,922 225,193,329 RGD:14298760
G ARF6 ADP ribosylation factor 6 JBrowse link 1 179,697,582 179,717,299 RGD:14298760
G BOK BCL2 family apoptosis regulator BOK JBrowse link 15 140,171,134 140,184,126 RGD:14298760
G CFTR CF transmembrane conductance regulator JBrowse link 18 28,627,717 28,818,209 RGD:14298760
G CLIP3 CAP-Gly domain containing linker protein 3 JBrowse link 6 45,390,656 45,418,866 RGD:14298760
G EHD2 EH domain containing 2 JBrowse link 6 53,423,489 53,442,007 RGD:14298760
G EHD3 EH domain containing 3 JBrowse link 3 108,103,631 108,135,161 RGD:14298760
G EHD4 EH domain containing 4 JBrowse link 1 129,374,515 129,460,206 RGD:14298760
G FZD7 frizzled class receptor 7 JBrowse link 15 105,644,164 105,648,860 RGD:14298760
G LAMP5 lysosomal associated membrane protein family member 5 JBrowse link 17 18,434,106 18,452,689 RGD:14298760
G LZTR1 leucine zipper like transcription regulator 1 JBrowse link 14 50,576,413 50,590,397 RGD:14298760
G MICALL1 MICAL like 1 JBrowse link 5 9,924,648 9,956,998 RGD:14298760
G NDRG1 N-myc downstream regulated 1 JBrowse link 4 8,014,445 8,069,335 RGD:14298760
G PACSIN2 protein kinase C and casein kinase substrate in neurons 2 JBrowse link 5 5,853,377 5,985,174 RGD:14298760
G RAB11A RAB11A, member RAS oncogene family JBrowse link 1 163,858,254 163,887,741 RGD:14298760
G RAB11B RAB11B, member RAS oncogene family JBrowse link 2 70,884,457 70,896,169 RGD:14298760
G RAB11FIP3 RAB11 family interacting protein 3 JBrowse link 3 41,211,683 41,284,998 RGD:14298760
G RAB11FIP4 RAB11 family interacting protein 4 JBrowse link 12 43,360,758 43,474,235 RGD:14298760
G RAB12 RAB12, member RAS oncogene family JBrowse link 6 99,216,225 99,244,627 RGD:14298760
G RAB17 RAB17, member RAS oncogene family JBrowse link 15 137,232,781 137,255,884 RGD:14298760
G RAB8A RAB8A, member RAS oncogene family JBrowse link 2 61,430,680 61,450,351 RGD:14298760
G RAP2A RAP2A, member of RAS oncogene family JBrowse link 11 66,679,162 66,718,565 RGD:14298760
G RAP2B RAP2B, member of RAS oncogene family JBrowse link 13 93,308,112 93,308,663 RGD:14298760
G RAP2C RAP2C, member of RAS oncogene family JBrowse link X 108,332,623 108,348,432 RGD:14298760
G SCAMP2 secretory carrier membrane protein 2 JBrowse link 7 58,672,638 58,699,145 RGD:14298760
G SCAMP3 secretory carrier membrane protein 3 JBrowse link 4 94,570,563 94,575,265 RGD:14298760
G SCAMP4 secretory carrier membrane protein 4 JBrowse link 2 76,614,984 76,634,314 RGD:14298760
G SCAMP5 secretory carrier membrane protein 5 JBrowse link 7 58,550,190 58,577,894 RGD:14298760
G SLC1A1 solute carrier family 1 member 1 JBrowse link 1 217,366,493 217,441,643 RGD:14298760
G SLC9A6 solute carrier family 9 member A6 JBrowse link X 111,176,461 111,233,108 RGD:14298760
G SORCS2 sortilin related VPS10 domain containing receptor 2 JBrowse link 8 3,207,087 3,715,002 RGD:14298760
G VTI1B vesicle transport through interaction with t-SNAREs 1B JBrowse link 7 91,386,020 91,413,480 RGD:14298760
G ZDHHC2 zinc finger DHHC-type palmitoyltransferase 2 JBrowse link 17 4,855,129 4,928,109 RGD:14298760

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 14676
    cellular anatomical entity 14529
      endomembrane system 2566
        endosome 514
          recycling endosome 97
            EARP complex 3
            apical recycling endosome 0
            basolateral recycling endosome 0
            peri-centrosomal recycling endosome 0
            postsynaptic recycling endosome + 4
            recycling endosome lumen 0
            recycling endosome membrane 33
Path 2
Term Annotations click to browse term
  cellular_component 14676
    cellular anatomical entity 14529
      organelle 9206
        membrane-bounded organelle 8091
          vesicle 1189
            intracellular vesicle 1110
              cytoplasmic vesicle 1107
                endosome 514
                  recycling endosome 97
                    EARP complex 3
                    apical recycling endosome 0
                    basolateral recycling endosome 0
                    peri-centrosomal recycling endosome 0
                    postsynaptic recycling endosome + 4
                    recycling endosome lumen 0
                    recycling endosome membrane 33
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.