ONTOLOGY REPORT - ANNOTATIONS


Term:response to lipoprotein particle
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Accession:GO:0055094 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoprotein particle stimulus.
Synonyms:exact_synonym: response to lipoprotein particle stimulus


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cellular response to low-density lipoprotein particle stimulus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca1 ATP binding cassette subfamily A member 1 JBrowse link 5 69,857,717 69,983,042 RGD:1624291
RGD:1600115
G Casr calcium-sensing receptor JBrowse link 11 67,188,204 67,262,261 RGD:7205681
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:1624291
RGD:1600115
G Cd81 Cd81 molecule JBrowse link 1 216,237,663 216,253,460 RGD:1600115
RGD:1624291
G Cd9 CD9 molecule JBrowse link 4 157,977,163 158,010,091 RGD:1624291
RGD:1600115
G F3 coagulation factor III, tissue factor JBrowse link 2 225,310,686 225,322,281 RGD:2313771
G Fcer1g Fc fragment of IgE receptor Ig JBrowse link 13 89,601,894 89,606,326 RGD:1624291
RGD:1600115
G Fgf21 fibroblast growth factor 21 JBrowse link 1 101,595,579 101,596,822 RGD:10401877
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 JBrowse link 2 52,427,351 52,445,082 RGD:2302235
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:1600115
RGD:1624291
G Itgb2 integrin subunit beta 2 JBrowse link 20 11,777,773 11,815,647 RGD:1624291
G Ldlr low density lipoprotein receptor JBrowse link 8 22,750,425 22,773,305 RGD:1600115
RGD:1624291
G Mfn2 mitofusin 2 JBrowse link 5 164,684,244 164,715,414 RGD:13204747
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:2325827
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:13504739
G Npc1 NPC intracellular cholesterol transporter 1 JBrowse link 18 3,616,878 3,662,656 RGD:1624291
RGD:1600115
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:1624291
RGD:1600115
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:8547812
G Socs5 suppressor of cytokine signaling 5 JBrowse link 6 10,671,311 10,705,610 RGD:1624291
RGD:1600115
G Srebf2 sterol regulatory element binding transcription factor 2 JBrowse link 7 123,381,082 123,438,605 RGD:1600115
RGD:1624291
G Syk spleen associated tyrosine kinase JBrowse link 17 12,614,311 12,669,568 RGD:1600115
RGD:1624291
cellular response to oxidised low-density lipoprotein particle stimulus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adtrp androgen-dependent TFPI-regulating protein JBrowse link 17 22,619,913 22,688,296 RGD:1600115
RGD:1624291
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:1600115
RGD:1624291
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:1624291
G Cd68 Cd68 molecule JBrowse link 10 56,268,726 56,270,605 RGD:1624291
G Mia3 MIA SH3 domain ER export factor 3 JBrowse link 13 101,727,434 101,770,127 RGD:1624291
G Myd88 MYD88, innate immune signal transduction adaptor JBrowse link 8 128,022,512 128,027,462 RGD:1624291
RGD:1600115
G Smpd3 sphingomyelin phosphodiesterase 3 JBrowse link 19 38,237,963 38,321,572 RGD:1624291
RGD:1600115
G Ticam1 toll-like receptor adaptor molecule 1 JBrowse link 9 10,780,185 10,790,280 RGD:1624291
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:1600115
RGD:1624291
G Tlr6 toll-like receptor 6 JBrowse link 14 45,024,351 45,041,188 RGD:1624291
low-density lipoprotein particle mediated signaling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:1624291
G Cdh13 cadherin 13 JBrowse link 19 50,848,793 51,971,618 RGD:1624291
RGD:1600115
G Lpl lipoprotein lipase JBrowse link 16 22,537,687 22,561,487 RGD:1624291
RGD:1600115
regulation of cellular response to very-low-density lipoprotein particle stimulus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17895
    response to stimulus 9792
      response to endogenous stimulus 1995
        response to lipoprotein particle 33
          cellular response to low-density lipoprotein particle stimulus + 23
          cellular response to oxidised low-density lipoprotein particle stimulus 10
          cellular response to very-low-density lipoprotein particle stimulus + 1
Path 2
Term Annotations click to browse term
  biological_process 17895
    response to stimulus 9792
      response to chemical 6095
        response to organic substance 3645
          response to organonitrogen compound 1341
            response to lipoprotein particle 33
              cellular response to low-density lipoprotein particle stimulus + 23
              cellular response to oxidised low-density lipoprotein particle stimulus 10
              cellular response to very-low-density lipoprotein particle stimulus + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.