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ONTOLOGY REPORT - ANNOTATIONS


Term:roof of mouth development
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Accession:GO:0060021 term browser browse the term
Definition:The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.
Synonyms:exact_synonym: palatum development


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roof of mouth development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACVR2B activin A receptor type 2B JBrowse link 3 38,350,838 38,389,839 RGD:9068941
G ALX1 ALX homeobox 1 JBrowse link 12 82,800,273 82,822,031 RGD:9068941
G ALX4 ALX homeobox 4 JBrowse link 11 44,219,865 44,269,597 RGD:9068941
G ANP32B acidic nuclear phosphoprotein 32 family member B JBrowse link 9 69,075,972 69,108,178 RGD:9068941
G ARID5B AT-rich interaction domain 5B JBrowse link 10 58,426,519 58,621,986 RGD:9068941
G ASPH aspartate beta-hydroxylase JBrowse link 8 57,921,580 58,134,778 RGD:9068941
G BCOR BCL6 corepressor JBrowse link X 32,497,931 32,624,307 RGD:9068941
G BMPR1A bone morphogenetic protein receptor type 1A JBrowse link 10 83,185,040 83,353,239 RGD:9068941
G BNC2 basonuclin 2 JBrowse link 9 16,230,704 16,684,863 RGD:9068941
G CDK20 cyclin dependent kinase 20 JBrowse link 9 59,114,640 59,146,438 RGD:9068941
G CHD7 chromodomain helicase DNA binding protein 7 JBrowse link 8 57,091,002 57,282,471 RGD:9068941
G COL11A2 collagen type XI alpha 2 chain JBrowse link 6 32,734,950 32,765,837 RGD:9068941
G COL2A1 collagen type II alpha 1 chain JBrowse link 12 40,726,137 40,757,690 RGD:9068941
G CPLANE1 ciliogenesis and planar polarity effector 1 JBrowse link 5 73,122,305 73,265,343 RGD:9068941
G CSRNP1 cysteine and serine rich nuclear protein 1 JBrowse link 3 39,038,039 39,050,754 RGD:9068941
G DHRS3 dehydrogenase/reductase 3 JBrowse link 1 11,319,109 11,370,463 RGD:9068941
G DLX5 distal-less homeobox 5 JBrowse link 7 88,972,066 88,977,588 RGD:9068941
G DLX6 distal-less homeobox 6 JBrowse link 7 88,957,570 88,962,703 RGD:9068941
G EPHB2 EPH receptor B2 JBrowse link 1 21,895,961 22,107,649 RGD:9068941
G EPHB3 EPH receptor B3 JBrowse link 3 181,604,188 181,624,744 RGD:9068941
G FOXE1 forkhead box E1 JBrowse link 9 68,943,747 68,947,226 RGD:9068941
G FOXF2 forkhead box F2 JBrowse link 6 1,209,899 1,215,970 RGD:9068941
G FRAS1 Fraser extracellular matrix complex subunit 1 JBrowse link 4 45,650,346 46,138,222 RGD:9068941
G FUZ fuzzy planar cell polarity protein JBrowse link 19 46,819,833 46,826,235 RGD:9068941
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 JBrowse link 15 3,129,481 3,357,495 RGD:9068941
G GAS1 growth arrest specific 1 JBrowse link 9 58,079,700 58,082,849 RGD:9068941
G GDF11 growth differentiation factor 11 JBrowse link 12 33,154,530 33,168,427 RGD:9068941
G GLI3 GLI family zinc finger 3 JBrowse link 7 42,004,965 42,280,772 RGD:9068941
G HAND2 heart and neural crest derivatives expressed 2 JBrowse link 4 165,755,000 165,758,735 RGD:9068941
G IFT172 intraflagellar transport 172 JBrowse link 2A 27,448,139 27,492,302 RGD:9068941
G INHBA inhibin subunit beta A JBrowse link 7 42,538,591 42,556,578 RGD:9068941
G INSIG1 insulin induced gene 1 JBrowse link 7 146,893,730 146,906,329 RGD:9068941
G INSIG2 insulin induced gene 2 JBrowse link 2B 5,046,971 5,068,757 RGD:9068941
G INTU inturned planar cell polarity protein JBrowse link 4 119,793,245 119,890,949 RGD:9068941
G LOXL3 lysyl oxidase like 3 JBrowse link 2A 74,598,870 74,622,502 RGD:9068941
G LRP6 LDL receptor related protein 6 JBrowse link 12 12,121,411 12,288,590 RGD:9068941
G MEF2C myocyte enhancer factor 2C JBrowse link 5 26,480,489 26,650,813 RGD:9068941
G MEN1 menin 1 JBrowse link 11 60,159,009 60,166,222 RGD:9068941
G MEOX2 mesenchyme homeobox 2 JBrowse link 7 16,268,225 16,343,914 RGD:9068941
G MSC musculin JBrowse link 8 68,365,708 68,368,628 RGD:9068941
G MSX1 msh homeobox 1 RGD:9068941
G NPRL3 NPR3 like, GATOR1 complex subunit RGD:9068941
G OSR1 odd-skipped related transcription factor 1 JBrowse link 2A 19,333,101 19,340,267 RGD:9068941
G OSR2 odd-skipped related transciption factor 2 JBrowse link 8 95,590,753 95,598,491 RGD:9068941
G PAK1IP1 PAK1 interacting protein 1 JBrowse link 6 10,535,863 10,550,978 RGD:9068941
G PDGFRA platelet derived growth factor receptor alpha JBrowse link 4 69,639,081 69,709,870 RGD:9068941
G PKDCC protein kinase domain containing, cytoplasmic JBrowse link 2A 42,146,153 42,156,652 RGD:9068941
G PLEKHA1 pleckstrin homology domain containing A1 JBrowse link 10 118,942,896 119,001,185 RGD:9068941
G PRDM16 PR/SET domain 16 JBrowse link 1 1,730,122 2,100,636 RGD:9068941
G PRRX1 paired related homeobox 1 JBrowse link 1 146,151,633 146,227,926 RGD:9068941
G PYGO2 pygopus family PHD finger 2 JBrowse link 1 130,305,547 130,310,270 RGD:9068941
G SATB2 SATB homeobox 2 JBrowse link 2B 86,518,043 86,720,212 RGD:9068941
G SCHIP1 schwannomin interacting protein 1 JBrowse link 3 156,307,829 156,919,728 RGD:9068941
G SGPL1 sphingosine-1-phosphate lyase 1 JBrowse link 10 67,286,349 67,351,574 RGD:9068941
G SHH sonic hedgehog signaling molecule JBrowse link 7 147,400,112 147,414,036 RGD:9068941
G SKI SKI proto-oncogene JBrowse link 1 944,428 1,029,695 RGD:9068941
G SNAI1 snail family transcriptional repressor 1 JBrowse link 20 46,321,075 46,328,865 RGD:9068941
G SNAI2 snail family transcriptional repressor 2 JBrowse link 8 45,341,857 45,345,544 RGD:9068941
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 JBrowse link 2A 39,019,046 39,162,248 RGD:9068941
G SUMO1 small ubiquitin like modifier 1 JBrowse link 2B 89,461,773 89,493,879 RGD:9068941
G TBC1D32 TBC1 domain family member 32 JBrowse link 6 118,884,928 119,139,138 RGD:9068941
G TBX2 T-box transcription factor 2 JBrowse link 17 55,501,932 55,511,537 RGD:9068941
G TBX3 T-box transcription factor 3 JBrowse link 12 112,240,050 112,254,299 RGD:9068941
G TCF21 transcription factor 21 JBrowse link 6 131,656,582 131,662,983 RGD:9068941
G TFAP2A transcription factor AP-2 alpha JBrowse link 6 10,237,834 10,260,843 RGD:9068941
G TGFB3 transforming growth factor beta 3 JBrowse link 14 56,516,697 56,542,097 RGD:9068941
G TGFBR1 transforming growth factor beta receptor 1 JBrowse link 9 70,195,007 70,243,514 RGD:9068941
G TGFBR3 transforming growth factor beta receptor 3 JBrowse link 1 94,337,275 94,539,229 RGD:9068941
G TIPARP TCDD inducible poly(ADP-ribose) polymerase JBrowse link 3 153,730,307 153,762,442 RGD:9068941
G TWIST1 twist family bHLH transcription factor 1 JBrowse link 7 19,761,041 19,765,665 RGD:9068941
G VAX1 ventral anterior homeobox 1 JBrowse link 10 113,710,934 113,720,671 RGD:9068941
G WDPCP WD repeat containing planar cell polarity effector JBrowse link 2A 63,180,279 63,658,804 RGD:9068941
G WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 RGD:9068941
G WFIKKN2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 JBrowse link 17 44,924,892 44,932,578 RGD:9068941
G WNT11 Wnt family member 11 JBrowse link 11 71,239,781 71,263,915 RGD:9068941
G WNT9B Wnt family member 9B JBrowse link 17 10,616,957 10,651,954 RGD:9068941
epithelial cell apoptotic process involved in palatal shelf morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G JAG2 jagged canonical Notch ligand 2 JBrowse link 14 85,785,586 85,812,056 RGD:9068941
hard palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DLG1 discs large MAGUK scaffold protein 1 JBrowse link 3 194,386,263 194,648,015 RGD:9068941
G FOXE1 forkhead box E1 JBrowse link 9 68,943,747 68,947,226 RGD:9068941
G FZD1 frizzled class receptor 1 JBrowse link 7 83,269,906 83,277,608 RGD:9068941
G FZD2 frizzled class receptor 2 JBrowse link 17 12,839,362 12,843,803 RGD:9068941
G MMP25 matrix metallopeptidase 25 JBrowse link 16 1,988,340 2,002,417 RGD:9068941
G SOX11 SRY-box transcription factor 11 JBrowse link 2A 5,699,738 5,711,210 RGD:9068941
primary palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BBS7 Bardet-Biedl syndrome 7 JBrowse link 4 114,024,949 114,072,000 RGD:9068941
G HAND2 heart and neural crest derivatives expressed 2 JBrowse link 4 165,755,000 165,758,735 RGD:9068941
G IFT88 intraflagellar transport 88 JBrowse link 13 1,893,102 2,017,771 RGD:9068941
secondary palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHD7 chromodomain helicase DNA binding protein 7 JBrowse link 8 57,091,002 57,282,471 RGD:9068941
G LEF1 lymphoid enhancer binding factor 1 JBrowse link 4 100,552,959 100,674,156 RGD:9068941
G LRRC32 leucine rich repeat containing 32 JBrowse link 11 71,708,222 71,721,426 RGD:9068941
G SMAD2 SMAD family member 2 JBrowse link 18 41,213,001 41,309,902 RGD:9068941
G SMAD4 SMAD family member 4 JBrowse link 18 44,402,112 44,456,779 RGD:9068941
G TGFB2 transforming growth factor beta 2 JBrowse link 1 193,907,398 194,005,800 RGD:9068941
G TGFB3 transforming growth factor beta 3 JBrowse link 14 56,516,697 56,542,097 RGD:9068941
G TGFBR2 transforming growth factor beta receptor 2 JBrowse link 3 30,536,187 30,623,653 RGD:9068941
G TGFBR3 transforming growth factor beta receptor 3 JBrowse link 1 94,337,275 94,539,229 RGD:9068941
G WNT11 Wnt family member 11 JBrowse link 11 71,239,781 71,263,915 RGD:9068941
G WNT3A Wnt family member 3A JBrowse link 1 203,409,294 203,463,214 RGD:9068941
G WNT5A Wnt family member 5A JBrowse link 3 55,396,279 55,418,579 RGD:9068941
G WNT7A Wnt family member 7A JBrowse link 3 13,733,487 13,797,189 RGD:9068941
G WNT8A Wnt family member 8A JBrowse link 5 133,419,324 133,471,094 RGD:9068941
soft palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G COL11A2 collagen type XI alpha 2 chain JBrowse link 6 32,734,950 32,765,837 RGD:9068941
G FOXE1 forkhead box E1 JBrowse link 9 68,943,747 68,947,226 RGD:9068941
G SOX11 SRY-box transcription factor 11 JBrowse link 2A 5,699,738 5,711,210 RGD:9068941
G TBX1 T-box transcription factor 1 JBrowse link 22 2,521,080 2,541,267 RGD:9068941
G TSHZ1 teashirt zinc finger homeobox 1 JBrowse link 18 68,597,354 68,676,462 RGD:9068941

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Term Annotations click to browse term
  biological_process 12490
    developmental process 5768
      anatomical structure development 5385
        roof of mouth development 96
          primary palate development 3
          primitive palate development 0
          secondary palate development + 24
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.