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ONTOLOGY REPORT - ANNOTATIONS


Term:roof of mouth development
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Accession:GO:0060021 term browser browse the term
Definition:The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.
Synonyms:exact_synonym: palatum development


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roof of mouth development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACVR2B activin A receptor type 2B JBrowse link 23 8,211,555 8,225,596 RGD:13508589
G ALX1 ALX homeobox 1 JBrowse link 15 26,838,615 26,858,786 RGD:13508589
G ALX4 ALX homeobox 4 JBrowse link 18 44,922,042 44,967,557 RGD:13508589
G ANP32B acidic nuclear phosphoprotein 32 family member B JBrowse link 11 55,230,017 55,272,744 RGD:9068941
G ARID5B AT-rich interaction domain 5B JBrowse link 4 13,926,759 14,105,069 RGD:13508589
G ASPH aspartate beta-hydroxylase JBrowse link 29 11,812,275 12,022,755 RGD:9068941
G BCOR BCL6 corepressor JBrowse link X 34,621,314 34,735,502 RGD:13508589
G BMPR1A bone morphogenetic protein receptor type 1A JBrowse link 4 34,499,898 34,582,481 RGD:13508589
G BNC2 basonuclin 2 JBrowse link 11 36,511,581 36,950,111 RGD:9068941
G CDK20 cyclin dependent kinase 20 JBrowse link 1 97,623,126 97,662,668 RGD:9068941
G CHD7 chromodomain helicase DNA binding protein 7 JBrowse link 29 11,115,865 11,284,713 RGD:9068941
G COL11A2 collagen type XI alpha 2 chain JBrowse link 12 2,626,829 2,656,680 RGD:9068941
G COL2A1 collagen type II alpha 1 chain JBrowse link 27 6,756,994 6,787,733 RGD:13508589
G CPLANE1 ciliogenesis and planar polarity effector 1 JBrowse link 4 71,435,994 71,567,567 RGD:13508589
G CSRNP1 cysteine and serine rich nuclear protein 1 JBrowse link 23 8,815,848 8,829,062 RGD:9068941
G DHRS3 dehydrogenase/reductase 3 JBrowse link 2 83,826,361 83,865,412 RGD:9068941
G DLX5 distal-less homeobox 5 JBrowse link 14 22,080,351 22,085,188 RGD:13508589
G DLX6 distal-less homeobox 6 JBrowse link 14 22,067,253 22,086,284 RGD:9068941
G EPHB2 EPH receptor B2 JBrowse link 2 76,427,112 76,551,494 RGD:9068941
G EPHB3 EPH receptor B3 JBrowse link 34 17,422,746 17,433,769 RGD:13508589
G FOXE1 forkhead box E1 JBrowse link 11 55,143,389 55,145,954 RGD:9068941
G FOXF2 forkhead box F2 JBrowse link 35 1,841,165 1,846,649 RGD:13508589
G FRAS1 Fraser extracellular matrix complex subunit 1 JBrowse link 32 2,558,442 2,993,199 RGD:13508589
G FUZ fuzzy planar cell polarity protein JBrowse link 1 106,742,381 106,752,543 RGD:9068941
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 JBrowse link 3 33,878,948 34,101,987 RGD:13508589
G GAS1 growth arrest specific 1 JBrowse link 1 72,927,346 72,930,119 RGD:9068941
G GDF11 growth differentiation factor 11 JBrowse link 10 142,039 152,537 RGD:13508589
G GLI3 GLI family zinc finger 3 JBrowse link 18 7,800,817 8,071,531 RGD:13508589
G HAND2 heart and neural crest derivatives expressed 2 JBrowse link 25 24,140,496 24,143,143 RGD:9068941
G IFT172 intraflagellar transport 172 JBrowse link 17 21,389,462 21,426,970 RGD:13508589
G INHBA inhibin subunit beta A JBrowse link 18 8,272,978 8,288,432 RGD:13508589
G INSIG1 insulin induced gene 1 JBrowse link 16 18,260,456 18,271,855 RGD:13508589
G INSIG2 insulin induced gene 2 JBrowse link 19 31,796,984 31,811,556 RGD:9068941
G INTU inturned planar cell polarity protein JBrowse link 19 13,193,252 13,276,593 RGD:13508589
G IRF6 interferon regulatory factor 6 JBrowse link 7 8,447,826 8,467,265 RGD:13508589
G LOXL3 lysyl oxidase like 3 JBrowse link 17 48,590,996 48,610,264 RGD:9068941
G LRP6 LDL receptor related protein 6 JBrowse link 27 34,003,334 34,166,334 RGD:13508589
G MEF2C myocyte enhancer factor 2C JBrowse link 3 19,778,997 19,948,203 RGD:9068941
G MEN1 menin 1 JBrowse link 18 52,346,747 52,352,884 RGD:9068941
G MEOX2 mesenchyme homeobox 2 JBrowse link 14 30,258,737 30,324,438 RGD:9068941
G MSC musculin JBrowse link 29 20,800,047 20,802,718 RGD:13508589
G MSX1 msh homeobox 1 JBrowse link 3 70,232,790 70,236,295 RGD:13508589
G NPRL3 NPR3 like, GATOR1 complex subunit JBrowse link 6 40,351,757 40,394,599 RGD:9068941
G OSR1 odd-skipped related transcription factor 1 JBrowse link 17 14,508,543 14,515,657 RGD:13508589
G OSR2 odd-skipped related transciption factor 2 JBrowse link 13 1,019,167 1,031,622 RGD:13508589
G PAK1IP1 PAK1 interacting protein 1 JBrowse link 35 10,436,179 10,446,078 RGD:13508589
G PDGFRA platelet derived growth factor receptor alpha JBrowse link 13 46,729,722 46,775,828 RGD:13508589
G PKDCC protein kinase domain containing, cytoplasmic JBrowse link 17 33,659,352 33,669,237 RGD:13508589
G PLEKHA1 pleckstrin homology domain containing A1 JBrowse link 28 32,025,791 32,081,824 RGD:13508589
G PRDM16 PR/SET domain 16 JBrowse link 5 57,805,951 58,018,817 RGD:13508589
G PRRX1 paired related homeobox 1 JBrowse link 7 28,065,570 28,138,734 RGD:13508589
G PYGO2 pygopus family PHD finger 2 JBrowse link 7 42,509,760 42,513,744 RGD:13508589
G SATB2 SATB homeobox 2 JBrowse link 37 8,548,295 8,837,416 RGD:13508589
G SGPL1 sphingosine-1-phosphate lyase 1 JBrowse link 4 21,666,264 21,717,476 RGD:13508589
G SHH sonic hedgehog signaling molecule JBrowse link 16 18,650,553 18,663,571 RGD:13508589
G SKI SKI proto-oncogene JBrowse link 5 57,144,178 57,216,385 RGD:9068941
G SNAI1 snail family transcriptional repressor 1 JBrowse link 24 36,498,343 36,503,623 RGD:13508589
G SNAI2 snail family transcriptional repressor 2 JBrowse link 29 1,154,132 1,156,653 RGD:13508589
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 JBrowse link 17 31,007,940 31,181,569 RGD:13508589
G SUMO1 small ubiquitin like modifier 1 JBrowse link 37 11,199,937 11,229,743 RGD:13508589
G TBC1D32 TBC1 domain family member 32 JBrowse link 1 60,662,704 60,873,881 RGD:9068941
G TBX2 T-box transcription factor 2 JBrowse link 9 35,237,323 35,245,066 RGD:13508589
G TBX3 T-box transcription factor 3 JBrowse link 26 11,694,885 11,709,594 RGD:13508589
G TCF21 transcription factor 21 JBrowse link 1 26,856,281 26,859,654 RGD:13508589
G TFAP2A transcription factor AP-2 alpha JBrowse link 35 10,157,043 10,180,484 RGD:9068941
G TGFB3 transforming growth factor beta 3 JBrowse link 8 48,920,874 48,946,037 RGD:9068941
G TGFBR1 transforming growth factor beta receptor 1 JBrowse link 11 56,191,383 56,223,042 RGD:13508589
G TGFBR3 transforming growth factor beta receptor 3 JBrowse link 6 57,025,096 57,220,240 RGD:9068941
G TIPARP TCDD inducible poly(ADP-ribose) polymerase JBrowse link 23 50,253,645 50,279,615 RGD:13508589
G VAX1 ventral anterior homeobox 1 JBrowse link 28 27,624,699 27,628,736 RGD:13508589
G WDPCP WD repeat containing planar cell polarity effector JBrowse link 10 62,894,818 63,316,555 RGD:13508589
G WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 JBrowse link 6 39,934,105 39,937,666 RGD:13508589
G WFIKKN2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 JBrowse link 9 26,711,470 26,717,625 RGD:13508589
G WNT11 Wnt family member 11 JBrowse link 21 22,442,496 22,463,040 RGD:9068941
G WNT9B Wnt family member 9B JBrowse link 9 10,157,607 10,172,664 RGD:13508589
epithelial cell apoptotic process involved in palatal shelf morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G JAG2 jagged canonical Notch ligand 2 JBrowse link 8 72,535,539 72,553,531 RGD:13508589
hard palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DLG1 discs large MAGUK scaffold protein 1 JBrowse link 33 30,016,323 30,253,180 RGD:9068941
G FOXE1 forkhead box E1 JBrowse link 11 55,143,389 55,145,954 RGD:9068941
G FZD1 frizzled class receptor 1 JBrowse link 14 17,046,911 17,050,515 RGD:13508589
G FZD2 frizzled class receptor 2 JBrowse link 9 18,888,711 18,890,549 RGD:13508589
G MMP25 matrix metallopeptidase 25 JBrowse link 6 38,128,585 38,139,882 RGD:13508589
primary palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BBS7 Bardet-Biedl syndrome 7 JBrowse link 19 18,280,487 18,319,128 RGD:13508589
G HAND2 heart and neural crest derivatives expressed 2 JBrowse link 25 24,140,496 24,143,143 RGD:13508589
G IFT88 intraflagellar transport 88 JBrowse link 25 17,414,965 17,551,405 RGD:9068941
secondary palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHD7 chromodomain helicase DNA binding protein 7 JBrowse link 29 11,115,865 11,284,713 RGD:13508589
G LEF1 lymphoid enhancer binding factor 1 JBrowse link 32 28,516,002 28,633,759 RGD:9068941
G LRRC32 leucine rich repeat containing 32 JBrowse link 21 22,051,140 22,059,714 RGD:13508589
G SMAD2 SMAD family member 2 JBrowse link 7 43,696,883 43,778,063 RGD:9068941
G SMAD4 SMAD family member 4 JBrowse link 1 23,875,989 23,930,027 RGD:13508589
G TGFB2 transforming growth factor beta 2 JBrowse link 38 13,430,832 13,511,655 RGD:9068941
G TGFB3 transforming growth factor beta 3 JBrowse link 8 48,920,874 48,946,037 RGD:9068941
G TGFBR2 transforming growth factor beta receptor 2 JBrowse link 23 13,886,869 13,946,480 RGD:9068941
G TGFBR3 transforming growth factor beta receptor 3 JBrowse link 6 57,025,096 57,220,240 RGD:9068941
G WNT11 Wnt family member 11 JBrowse link 21 22,442,496 22,463,040 RGD:13508589
G WNT3A Wnt family member 3A JBrowse link 14 864,393 899,698 RGD:13508589
G WNT5A Wnt family member 5A JBrowse link 20 34,756,430 34,790,937 RGD:13508589
G WNT7A Wnt family member 7A JBrowse link 20 4,072,010 4,139,521 RGD:13508589
G WNT8A Wnt family member 8A JBrowse link 11 25,707,058 25,752,724 RGD:9068941
soft palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G COL11A2 collagen type XI alpha 2 chain JBrowse link 12 2,626,829 2,656,680 RGD:9068941
G FOXE1 forkhead box E1 JBrowse link 11 55,143,389 55,145,954 RGD:9068941
G TBX1 T-box transcription factor 1 JBrowse link 26 29,529,071 29,533,240 RGD:9068941
G TSHZ1 teashirt zinc finger homeobox 1 JBrowse link 1 4,224,875 4,229,755 RGD:13508589

Term paths to the root
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Term Annotations click to browse term
  biological_process 16042
    developmental process 6212
      anatomical structure development 5762
        roof of mouth development 94
          primary palate development 3
          primitive palate development 0
          secondary palate development + 23
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.