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ONTOLOGY REPORT - ANNOTATIONS


Term:roof of mouth development
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Accession:GO:0060021 term browser browse the term
Definition:The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.
Synonyms:exact_synonym: palatum development


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roof of mouth development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACVR2B activin A receptor type 2B JBrowse link 3 38,453,890 38,493,142 RGD:2290271
G ALX1 ALX homeobox 1 JBrowse link 12 85,280,220 85,301,784 RGD:2290271
G ALX4 ALX homeobox 4 JBrowse link 11 44,260,440 44,310,139 RGD:2290271
G ANP32B acidic nuclear phosphoprotein 32 family member B JBrowse link 9 97,983,341 98,015,943 RGD:2290271
G ARID5B AT-rich interaction domain 5B JBrowse link 10 61,901,254 62,096,944 RGD:2290271
G ASPH aspartate beta-hydroxylase JBrowse link 8 61,500,556 61,714,640 RGD:2290271
G BCOR BCL6 corepressor JBrowse link X 40,051,246 40,177,390 RGD:2290271
G BMPR1A bone morphogenetic protein receptor type 1A JBrowse link 10 86,755,786 86,927,969 RGD:2290271
G BNC2 basonuclin 2 JBrowse link 9 16,409,503 16,870,670 RGD:2290271
G CDK20 cyclin dependent kinase 20 JBrowse link 9 87,966,441 87,974,780 RGD:9068941
G CHD7 chromodomain helicase DNA binding protein 7 JBrowse link 8 60,678,740 60,868,028 RGD:9068941
G CLDN5 claudin 5 JBrowse link 22 19,523,024 19,525,337 RGD:2290271
G COL11A2 collagen type XI alpha 2 chain JBrowse link 6 33,162,692 33,193,009 RGD:2290271
G COL2A1 collagen type II alpha 1 chain JBrowse link 12 47,972,967 48,006,212 RGD:2290271
G CPLANE1 ciliogenesis and planar polarity effector 1 JBrowse link 5 37,063,928 37,249,499 RGD:2290271
G CSRNP1 cysteine and serine rich nuclear protein 1 JBrowse link 3 39,141,851 39,154,641 RGD:2290271
G DHRS3 dehydrogenase/reductase 3 JBrowse link 1 12,567,910 12,618,210 RGD:2290271
G DLX5 distal-less homeobox 5 JBrowse link 7 97,020,396 97,024,831 RGD:2290271
G DLX6 distal-less homeobox 6 JBrowse link 7 97,005,553 97,011,040 RGD:2290271
G EPHB2 EPH receptor B2 JBrowse link 1 22,710,770 22,921,500 RGD:2290271
G EPHB3 EPH receptor B3 JBrowse link 3 184,561,785 184,582,408 RGD:2290271
G FOXE1 forkhead box E1 JBrowse link 9 97,853,226 97,856,717 RGD:9068941
G FOXF2 forkhead box F2 JBrowse link 6 1,389,576 1,395,603 RGD:2290271
G FRAS1 Fraser extracellular matrix complex subunit 1 JBrowse link 4 78,057,323 78,544,269 RGD:2290271
G FUZ fuzzy planar cell polarity protein JBrowse link 19 49,806,866 49,817,376 RGD:9068941
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 JBrowse link 15 26,543,546 26,773,763 RGD:2290271
G GAS1 growth arrest specific 1 JBrowse link 9 86,944,362 86,947,506 RGD:9068941
G GDF11 growth differentiation factor 11 JBrowse link 12 55,743,122 55,757,264 RGD:2290271
G GLI3 GLI family zinc finger 3 JBrowse link 7 41,960,949 42,237,209 RGD:2290271
G HAND2 heart and neural crest derivatives expressed 2 JBrowse link 4 173,526,091 173,530,229 RGD:9068941
G IFT172 intraflagellar transport 172 JBrowse link 2 27,444,373 27,489,819 RGD:2290271
G INHBA inhibin subunit beta A JBrowse link 7 41,685,101 41,710,532 RGD:2290271
G INSIG1 insulin induced gene 1 JBrowse link 7 155,297,772 155,310,235 RGD:2290271
G INSIG2 insulin induced gene 2 JBrowse link 2 118,088,418 118,110,997 RGD:2290271
G INTU inturned planar cell polarity protein JBrowse link 4 127,623,271 127,726,737 RGD:2290271
G IRF6 interferon regulatory factor 6 JBrowse link 1 209,785,617 209,806,175 RGD:2290271
G LOXL3 lysyl oxidase like 3 JBrowse link 2 74,532,258 74,555,719 RGD:2290271
G LRP6 LDL receptor related protein 6 JBrowse link 12 12,116,025 12,267,044 RGD:2290271
G MEF2C myocyte enhancer factor 2C JBrowse link 5 88,717,117 88,904,105 RGD:2290271
G MEN1 menin 1 JBrowse link 11 64,803,514 64,811,294 RGD:9068941
G MEOX2 mesenchyme homeobox 2 JBrowse link 7 15,611,212 15,686,683 RGD:2290271
G MSC musculin JBrowse link 8 71,841,542 71,844,496 RGD:2290271
G MSX1 msh homeobox 1 JBrowse link 4 4,859,665 4,863,936 RGD:2290271
G NPRL3 NPR3 like, GATOR1 complex subunit JBrowse link 16 85,386 138,698 RGD:2290271
G OSR1 odd-skipped related transcription factor 1 JBrowse link 2 19,351,485 19,358,623 RGD:2290271
G OSR2 odd-skipped related transciption factor 2 JBrowse link 8 98,944,403 98,952,104 RGD:2290271
G PAK1IP1 PAK1 interacting protein 1 JBrowse link 6 10,690,865 10,709,782 RGD:2290271
G PDGFRA platelet derived growth factor receptor alpha JBrowse link 4 54,229,127 54,298,247 RGD:2290271
G PKDCC protein kinase domain containing, cytoplasmic JBrowse link 2 42,048,021 42,058,517 RGD:2290271
G PLEKHA1 pleckstrin homology domain containing A1 JBrowse link 10 122,374,675 122,442,600 RGD:2290271
G PRDM16 PR/SET domain 16 JBrowse link 1 3,069,203 3,438,621 RGD:2290271
G PRRX1 paired related homeobox 1 JBrowse link 1 170,662,728 170,739,421 RGD:2290271
G PYGO2 pygopus family PHD finger 2 JBrowse link 1 154,957,026 154,961,782 RGD:2290271
G SATB2 SATB homeobox 2 JBrowse link 2 199,269,500 199,471,266 RGD:2290271
G SCHIP1 schwannomin interacting protein 1 JBrowse link 3 159,273,247 159,897,366 RGD:9068941
G SGPL1 sphingosine-1-phosphate lyase 1 JBrowse link 10 70,815,920 70,881,184 RGD:2290271
G SHH sonic hedgehog signaling molecule JBrowse link 7 155,799,980 155,812,463 RGD:2290271
G SKI SKI proto-oncogene JBrowse link 1 2,228,319 2,310,213 RGD:2290271
G SNAI1 snail family transcriptional repressor 1 JBrowse link 20 49,982,980 49,988,886 RGD:2290271
G SNAI2 snail family transcriptional repressor 2 JBrowse link 8 48,917,598 48,921,429 RGD:2290271
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 JBrowse link 2 38,981,549 39,124,868 RGD:2290271
G SUMO1 small ubiquitin like modifier 1 JBrowse link 2 202,206,171 202,238,597 RGD:2290271
G TBC1D32 TBC1 domain family member 32 JBrowse link 6 121,079,494 121,335,384 RGD:9068941
G TBX2 T-box transcription factor 2 JBrowse link 17 61,399,843 61,409,466 RGD:2290271
G TBX3 T-box transcription factor 3 JBrowse link 12 114,670,255 114,684,175 RGD:2290271
G TCF21 transcription factor 21 JBrowse link 6 133,889,113 133,895,537 RGD:2290271
G TFAP2A transcription factor AP-2 alpha JBrowse link 6 10,396,677 10,420,060 RGD:2290271
G TGFB3 transforming growth factor beta 3 JBrowse link 14 75,958,061 75,983,011 RGD:9068941
G TGFBR1 transforming growth factor beta receptor 1 JBrowse link 9 99,104,038 99,154,192 RGD:2290271
G TGFBR3 transforming growth factor beta receptor 3 JBrowse link 1 91,680,343 91,906,002 RGD:9068941
G TIPARP TCDD inducible poly(ADP-ribose) polymerase JBrowse link 3 156,674,590 156,706,770 RGD:2290271
G TWIST1 twist family bHLH transcription factor 1 JBrowse link 7 19,113,047 19,117,636 RGD:2290271
G VAX1 ventral anterior homeobox 1 JBrowse link 10 117,128,520 117,138,270 RGD:2290271
G WDPCP WD repeat containing planar cell polarity effector JBrowse link 2 63,119,559 63,588,733 RGD:2290271
G WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 JBrowse link 16 630,985 634,117 RGD:2290271
G WFIKKN2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 JBrowse link 17 50,834,584 50,842,353 RGD:2290271
G WNT11 Wnt family member 11 JBrowse link 11 76,186,325 76,210,842 RGD:9068941
G WNT9B Wnt family member 9B JBrowse link 17 46,833,201 46,886,738 RGD:2290271
epithelial cell apoptotic process involved in palatal shelf morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G JAG2 jagged canonical Notch ligand 2 JBrowse link 14 105,140,981 105,168,776 RGD:2290271
hard palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DLG1 discs large MAGUK scaffold protein 1 JBrowse link 3 197,042,560 197,299,321 RGD:2290271
G FOXE1 forkhead box E1 JBrowse link 9 97,853,226 97,856,717 RGD:2290271
G FZD1 frizzled class receptor 1 JBrowse link 7 91,264,433 91,271,326 RGD:2290271
G FZD2 frizzled class receptor 2 JBrowse link 17 44,557,484 44,561,262 RGD:2290271
G MMP25 matrix metallopeptidase 25 JBrowse link 16 3,045,963 3,060,729 RGD:2290271
G SOX11 SRY-box transcription factor 11 JBrowse link 2 5,692,384 5,701,385 RGD:2290271
primary palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BBS7 Bardet-Biedl syndrome 7 JBrowse link 4 121,824,329 121,870,497 RGD:2290271
G HAND2 heart and neural crest derivatives expressed 2 JBrowse link 4 173,526,091 173,530,229 RGD:2290271
G IFT88 intraflagellar transport 88 JBrowse link 13 20,566,446 20,691,444 RGD:9068941
secondary palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CHD7 chromodomain helicase DNA binding protein 7 JBrowse link 8 60,678,740 60,868,028 RGD:2290271
G LEF1 lymphoid enhancer binding factor 1 JBrowse link 4 108,047,545 108,168,956 RGD:2290271
G LRRC32 leucine rich repeat containing 32 JBrowse link 11 76,657,524 76,670,747 RGD:2290271
G SMAD2 SMAD family member 2 JBrowse link 18 47,808,957 47,931,188 RGD:2290271
G SMAD4 SMAD family member 4 JBrowse link 18 51,030,213 51,085,042 RGD:2290271
G TGFB2 transforming growth factor beta 2 JBrowse link 1 218,345,284 218,444,619 RGD:2290271
G TGFB3 transforming growth factor beta 3 JBrowse link 14 75,958,061 75,983,011 RGD:2290271
G TGFBR2 transforming growth factor beta receptor 2 JBrowse link 3 30,606,472 30,694,142 RGD:2290271
G TGFBR3 transforming growth factor beta receptor 3 JBrowse link 1 91,680,343 91,906,002 RGD:2290271
G WNT11 Wnt family member 11 JBrowse link 11 76,186,325 76,210,842 RGD:2290271
G WNT3A Wnt family member 3A JBrowse link 1 228,006,998 228,067,113 RGD:2290271
G WNT5A Wnt family member 5A JBrowse link 3 55,465,715 55,505,261 RGD:2290271
G WNT7A Wnt family member 7A JBrowse link 3 13,816,258 13,880,071 RGD:2290271
G WNT8A Wnt family member 8A JBrowse link 5 138,077,367 138,092,900 RGD:2290271
soft palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G COL11A2 collagen type XI alpha 2 chain JBrowse link 6 33,162,692 33,193,009 RGD:2290271
G FOXE1 forkhead box E1 JBrowse link 9 97,853,226 97,856,717 RGD:2290271
G SOX11 SRY-box transcription factor 11 JBrowse link 2 5,692,384 5,701,385 RGD:2290271
G TBX1 T-box transcription factor 1 JBrowse link 22 19,756,703 19,783,593 RGD:2290271
G TSHZ1 teashirt zinc finger homeobox 1 JBrowse link 18 75,210,797 75,289,946 RGD:2290271

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Term Annotations click to browse term
  biological_process 18542
    developmental process 7417
      anatomical structure development 6821
        roof of mouth development 98
          primary palate development 3
          primitive palate development 0
          secondary palate development + 24
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.