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ONTOLOGY REPORT - ANNOTATIONS


Term:roof of mouth development
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Accession:GO:0060021 term browser browse the term
Definition:The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.
Synonyms:exact_synonym: palatum development


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roof of mouth development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvr2b activin A receptor type 2B JBrowse link NW_004936473 27,816,366 27,822,555 RGD:9068941
G Alx1 ALX homeobox 1 JBrowse link NW_004936507 2,775,752 2,797,065 RGD:9068941
G Alx4 ALX homeobox 4 JBrowse link NW_004936562 4,316,550 4,326,022 RGD:9068941
G Anp32b acidic nuclear phosphoprotein 32 family member B JBrowse link NW_004936524 6,735,047 6,757,874 RGD:9068941
G Arid5b AT-rich interaction domain 5B JBrowse link NW_004936614 1,072,263 1,252,573 RGD:9068941
G Asph aspartate beta-hydroxylase JBrowse link NW_004936496 11,604,992 11,815,680 RGD:9068941
G Bcor BCL6 corepressor JBrowse link NW_004936502 6,764,043 6,812,194 RGD:9068941
G Bmpr1a bone morphogenetic protein receptor type 1A JBrowse link NW_004936804 52,435 115,289 RGD:9068941
G Bnc2 basonuclin 2 JBrowse link NW_004936771 747,487 1,036,546 RGD:9068941
G Chd7 chromodomain helicase DNA binding protein 7 JBrowse link NW_004936496 12,381,225 12,505,121 RGD:9068941
G Col11a2 collagen type XI alpha 2 chain JBrowse link NW_004936476 25,663,563 25,692,315 RGD:9068941
G Col2a1 collagen type II alpha 1 chain JBrowse link NW_004936512 5,861,933 5,894,898 RGD:9068941
G Cplane1 ciliogenesis and planar polarity effector 1 JBrowse link NW_004936518 4,706,496 4,847,283 RGD:9068941
G Csrnp1 cysteine and serine rich nuclear protein 1 JBrowse link NW_004936473 28,398,528 28,409,962 RGD:9068941
G Dhrs3 dehydrogenase/reductase 3 JBrowse link NW_004936474 1,237,177 1,270,299 RGD:9068941
G Dlx5 distal-less homeobox 5 JBrowse link NW_004936585 3,462,063 3,466,641 RGD:9068941
G Dlx6 distal-less homeobox 6 JBrowse link NW_004936585 3,477,081 3,481,087 RGD:9068941
G Ephb2 EPH receptor B2 JBrowse link NW_004936474 8,109,800 8,203,106 RGD:9068941
G Ephb3 EPH receptor B3 JBrowse link NW_004936578 5,286,580 5,297,369 RGD:9068941
G Foxe1 forkhead box E1 JBrowse link NW_004936524 6,619,128 6,620,278 RGD:9068941
G Foxf2 forkhead box F2 JBrowse link NW_004936633 2,538,209 2,543,649 RGD:9068941
G Fras1 Fraser extracellular matrix complex subunit 1 JBrowse link NW_004936676 1,870,856 2,138,832 RGD:9068941
G Fuz fuzzy planar cell polarity protein JBrowse link NW_004936664 3,596,764 3,601,676 RGD:9068941
G Gabrb3 gamma-aminobutyric acid type A receptor beta3 subunit JBrowse link NW_004936471 39,791,633 40,193,049 RGD:9068941
G Gdf11 growth differentiation factor 11 JBrowse link NW_004936646 215,101 227,296 RGD:9068941
G Gli3 GLI family zinc finger 3 JBrowse link NW_004936478 17,129,922 17,403,630 RGD:9068941
G Hand2 heart and neural crest derivatives expressed 2 JBrowse link NW_004936516 4,692,926 4,695,625 RGD:9068941
G Ift172 intraflagellar transport 172 JBrowse link NW_004936493 5,108,437 5,145,160 RGD:9068941
G Inhba inhibin subunit beta A JBrowse link NW_004936478 16,878,725 16,884,065 RGD:9068941
G Insig1 insulin induced gene 1 JBrowse link NW_004936527 9,684,304 9,696,951 RGD:9068941
G Insig2 insulin induced gene 2 JBrowse link NW_004936469 52,120,063 52,140,646 RGD:9068941
G Intu inturned planar cell polarity protein JBrowse link NW_004936642 2,950,197 3,025,079 RGD:9068941
G Loxl3 lysyl oxidase like 3 JBrowse link NW_004936556 745,798 765,926 RGD:9068941
G Lrp6 LDL receptor related protein 6 JBrowse link NW_004936587 5,065,200 5,143,029 RGD:9068941
G Mef2c myocyte enhancer factor 2C JBrowse link NW_004936469 7,060,480 7,225,497 RGD:9068941
G Men1 menin 1 JBrowse link NW_004936599 4,504,489 4,510,085 RGD:9068941
G Meox2 mesenchyme homeobox 2 JBrowse link NW_004936546 2,239,442 2,304,099 RGD:9068941
G Msc musculin JBrowse link NW_004936648 958,396 961,777 RGD:9068941
G Msx1 msh homeobox 1 JBrowse link NW_004936477 17,406,551 17,413,615 RGD:9068941
G Nprl3 NPR3 like, GATOR1 complex subunit JBrowse link NW_004936501 747,806 783,479 RGD:9068941
G Osr1 odd-skipped related transcription factor 1 JBrowse link NW_004936493 11,888,024 11,895,058 RGD:9068941
G Osr2 odd-skipped related transciption factor 2 JBrowse link NW_004936470 44,024,497 44,032,429 RGD:9068941
G Pak1ip1 PAK1 interacting protein 1 JBrowse link NW_004936534 2,251,512 2,260,260 RGD:9068941
G Pdgfra platelet derived growth factor receptor alpha JBrowse link NW_004936482 16,804,129 16,853,539 RGD:9068941
G Pkdcc protein kinase domain containing, cytoplasmic JBrowse link NW_004936508 9,550,201 9,559,493 RGD:9068941
G Plekha1 pleckstrin homology domain containing A1 JBrowse link NW_004936486 11,203,873 11,241,028 RGD:9068941
G Prdm16 PR/SET domain 16 JBrowse link NW_004936737 400,819 446,768 RGD:9068941
G Prrx1 paired related homeobox 1 JBrowse link NW_004936481 16,208,243 16,272,836 RGD:9068941
G Pygo2 pygopus family PHD finger 2 JBrowse link NW_004936580 4,506,982 4,511,044 RGD:9068941
G Satb2 SATB homeobox 2 JBrowse link NW_004936506 34,968 206,432 RGD:9068941
G Sgpl1 sphingosine-1-phosphate lyase 1 JBrowse link NW_004936521 7,850,370 7,899,998 RGD:9068941
G Shh sonic hedgehog signaling molecule JBrowse link NW_004936527 10,033,095 10,042,713 RGD:9068941
G Ski SKI proto-oncogene JBrowse link NW_004936737 1,223,653 1,274,664 RGD:9068941
G Snai1 snail family transcriptional repressor 1 JBrowse link NW_004936514 4,456,498 4,462,436 RGD:9068941
G Snai2 snail family transcriptional repressor 2 JBrowse link NW_004936590 3,813,916 3,817,642 RGD:9068941
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 JBrowse link NW_004936508 12,162,553 12,281,812 RGD:9068941
G Sumo1 small ubiquitin like modifier 1 JBrowse link NW_004936726 1,402,977 1,413,974 RGD:9068941
G Tbc1d32 TBC1 domain family member 32 JBrowse link NW_004936658 3,632,314 3,814,134 RGD:9068941
G Tbx2 T-box transcription factor 2 JBrowse link NW_004936490 2,769,264 2,778,342 RGD:9068941
G Tbx3 T-box transcription factor 3 JBrowse link NW_004936558 7,230,361 7,243,651 RGD:9068941
G Tcf21 transcription factor 21 JBrowse link NW_004936560 1,733,903 1,736,895 RGD:9068941
G Tfap2a transcription factor AP-2 alpha JBrowse link NW_004936534 2,481,804 2,518,573 RGD:9068941
G Tgfb3 transforming growth factor beta 3 JBrowse link NW_004936488 4,986,712 5,008,728 RGD:9068941
G Tgfbr1 transforming growth factor beta receptor 1 JBrowse link NW_004936524 7,656,523 7,680,043 RGD:9068941
G Tgfbr3 transforming growth factor beta receptor 3 JBrowse link NW_004936537 7,154,125 7,340,218 RGD:9068941
G Tiparp TCDD inducible poly(ADP-ribose) polymerase JBrowse link NW_004936519 3,683,972 3,712,081 RGD:9068941
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
G Vax1 ventral anterior homeobox 1 JBrowse link NW_004936486 6,972,972 6,978,544 RGD:9068941
G Wdpcp WD repeat containing planar cell polarity effector JBrowse link NW_004936491 8,238,644 8,749,172 RGD:9068941
G Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 JBrowse link NW_004936501 371,328 375,271 RGD:9068941
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 JBrowse link NW_004936490 10,897,390 10,903,605 RGD:9068941
G Wnt11 Wnt family member 11 JBrowse link NW_004936498 4,909,041 4,927,482 RGD:9068941
G Wnt9b Wnt family member 9B JBrowse link NW_004936541 1,899,039 1,939,561 RGD:9068941
epithelial cell apoptotic process involved in palatal shelf morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Jag2 jagged canonical Notch ligand 2 JBrowse link NW_004936621 363,489 380,616 RGD:9068941
hard palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link NW_004936833 551,989 843,064 RGD:9068941
G Foxe1 forkhead box E1 JBrowse link NW_004936524 6,619,128 6,620,278 RGD:9068941
G Fzd1 frizzled class receptor 1 JBrowse link NW_004936621 2,899,183 2,903,427 RGD:9068941
G Fzd2 frizzled class receptor 2 JBrowse link NW_004936541 965,135 967,018 RGD:9068941
G Mmp25 matrix metallopeptidase 25 JBrowse link NW_004936694 1,118,432 1,128,315 RGD:9068941
G Sox11 SRY-box transcription factor 11 JBrowse link NW_004937107 203,120 207,185 RGD:9068941
primary palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bbs7 Bardet-Biedl syndrome 7 JBrowse link NW_004936662 1,081,237 1,116,719 RGD:9068941
G Hand2 heart and neural crest derivatives expressed 2 JBrowse link NW_004936516 4,692,926 4,695,625 RGD:9068941
G Ift88 intraflagellar transport 88 JBrowse link NW_004936720 1,041,216 1,168,725 RGD:9068941
secondary palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chd7 chromodomain helicase DNA binding protein 7 JBrowse link NW_004936496 12,381,225 12,505,121 RGD:9068941
G Lef1 lymphoid enhancer binding factor 1 JBrowse link NW_004936818 453,635 569,194 RGD:9068941
G Lrrc32 leucine rich repeat containing 32 JBrowse link NW_004936498 5,305,680 5,315,580 RGD:9068941
G Smad2 SMAD family member 2 JBrowse link NW_004936497 14,723,199 14,812,160 RGD:9068941
G Smad4 SMAD family member 4 JBrowse link NW_004936497 12,242,869 12,278,012 RGD:9068941
G Tgfb2 transforming growth factor beta 2 JBrowse link NW_004936628 310,720 394,002 RGD:9068941
G Tgfb3 transforming growth factor beta 3 JBrowse link NW_004936488 4,986,712 5,008,728 RGD:9068941
G Tgfbr2 transforming growth factor beta receptor 2 JBrowse link NW_004936473 21,324,669 21,409,430 RGD:9068941
G Tgfbr3 transforming growth factor beta receptor 3 JBrowse link NW_004936537 7,154,125 7,340,218 RGD:9068941
G Wnt11 Wnt family member 11 JBrowse link NW_004936498 4,909,041 4,927,482 RGD:9068941
G Wnt3a Wnt family member 3A JBrowse link NW_004936864 150,742 179,205 RGD:9068941
G Wnt5a Wnt family member 5A JBrowse link NW_004936473 6,031,627 6,052,211 RGD:9068941
G Wnt7a Wnt family member 7A JBrowse link NW_004936898 45,903 70,313 RGD:9068941
G Wnt8a Wnt family member 8A JBrowse link NW_004936531 7,273,681 7,279,394 RGD:9068941
soft palate development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Col11a2 collagen type XI alpha 2 chain JBrowse link NW_004936476 25,663,563 25,692,315 RGD:9068941
G Foxe1 forkhead box E1 JBrowse link NW_004936524 6,619,128 6,620,278 RGD:9068941
G Sox11 SRY-box transcription factor 11 JBrowse link NW_004937107 203,120 207,185 RGD:9068941
G Tbx1 T-box transcription factor 1 JBrowse link NW_004936619 3,662,567 3,670,470 RGD:9068941
G Tshz1 teashirt zinc finger homeobox 1 JBrowse link NW_004936616 3,353,334 3,378,819 RGD:9068941

Term paths to the root
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Term Annotations click to browse term
  biological_process 11930
    developmental process 5576
      anatomical structure development 5218
        roof of mouth development 93
          primary palate development 3
          primitive palate development 0
          secondary palate development + 24
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.