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ONTOLOGY REPORT - ANNOTATIONS


Term:auditory receptor cell stereocilium organization
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Accession:GO:0060088 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells.
Synonyms:exact_synonym: auditory receptor cell stereocilium organisation
 related_synonym: auditory receptor cell stereocilium organization and biogenesis


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auditory receptor cell stereocilium organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:3709803|PMID:11875276) MGI PMID:11875276 MGI:3709803 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Cdh23 cadherin related 23 ISO (MGI:3526751|PMID:15537665)
(MGI:75953|PMID:7610888), (MGI:81497|PMID:8790740), (MGI:86134|PMID:9039475)
(MGI:1929001|PMID:11138008), (MGI:3686545|PMID:17050716), (MGI:5468200|PMID:23217710)
(MGI:3625226|PMID:12121736)
(MGI:1933915|PMID:11322776)
MGI PMID:7610888, PMID:8790740, PMID:9039475, PMID:11138008, PMID:11322776, PMID:12121736, PMID:15537665, PMID:17050716, PMID:23217710 MGI:1929001, MGI:1933915, MGI:3526751, MGI:3625226, MGI:3686545, MGI:5468200, MGI:75953, MGI:81497, MGI:86134 NCBI chrNW_004955437:19,683,792...20,044,718
Ensembl chrNW_004955437:19,684,473...20,003,819
JBrowse link
G Clic5 chloride intracellular channel 5 ISO (MGI:3663248|PMID:17021174) MGI PMID:17021174 MGI:3663248 NCBI chrNW_004955437:11,053,885...11,118,150
Ensembl chrNW_004955437:11,053,885...11,118,255
JBrowse link
G Clrn1 clarin 1 ISO (MGI:3849925|PMID:19414487), (MGI:4353469|PMID:19423712) MGI PMID:19414487, PMID:19423712 MGI:3849925, MGI:4353469 NCBI chrNW_004955448:2,062,647...2,106,548
Ensembl chrNW_004955448:2,062,647...2,106,548
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 ISO (MGI:6278501|PMID:30380417) MGI PMID:30380417 MGI:6278501 NCBI chrNW_004955415:8,203,968...8,220,148
Ensembl chrNW_004955415:8,203,968...8,220,148
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 ISO (MGI:3578102|PMID:15905332)
(MGI:3759710|PMID:17876667), (MGI:5468200|PMID:23217710)
MGI PMID:15905332, PMID:17876667, PMID:23217710 MGI:3578102, MGI:3759710, MGI:5468200 NCBI chrNW_004955437:3,644,448...3,650,688 JBrowse link
G Myo3a myosin IIIA ISO (MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:5766107 NCBI chrNW_004955429:3,172,457...3,358,688
Ensembl chrNW_004955429:3,172,996...3,358,688
JBrowse link
G Myo3b myosin IIIB ISO (MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:5766107 NCBI chrNW_004955449:4,128,816...4,546,651
Ensembl chrNW_004955449:4,129,823...4,546,296
JBrowse link
G Myo7a myosin VIIA ISO (MGI:3686545|PMID:17050716)
(MGI:2156358|PMID:11753415)
(MGI:3625226|PMID:12121736)
MGI PMID:11753415, PMID:12121736, PMID:17050716 MGI:2156358, MGI:3625226, MGI:3686545 NCBI chrNW_004955414:14,576,356...14,647,500
Ensembl chrNW_004955414:14,576,356...14,647,500
JBrowse link
G Pcdh15 protocadherin related 15 ISO (MGI:5468200|PMID:23217710)
(MGI:3526751|PMID:15537665)
(MGI:1928787|PMID:10978835)
(MGI:3619110|PMID:11124469)
(MGI:3654702|PMID:16887306)
MGI PMID:10978835, PMID:11124469, PMID:15537665, PMID:16887306, PMID:23217710 MGI:1928787, MGI:3526751, MGI:3619110, MGI:3654702, MGI:5468200 NCBI chrNW_004955425:8,443,523...9,203,177
Ensembl chrNW_004955425:8,428,680...8,899,028
JBrowse link
G Pdzd7 PDZ domain containing 7 ISO (MGI:5565635|PMID:24334608) MGI PMID:24334608 MGI:5565635 NCBI chrNW_004955485:9,166,721...9,183,129
Ensembl chrNW_004955485:9,166,745...9,182,427
JBrowse link
G Pls1 plastin 1 ISO (MGI:5608770|PMID:25124451) UniProt PMID:25124451 MGI:5608770 NCBI chrNW_004955508:3,215,304...3,324,240
Ensembl chrNW_004955508:3,213,646...3,260,554
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 ISO (MGI:5789047|PMID:27269051) UniProt PMID:27269051 MGI:5789047 NCBI chrNW_004955483:2,048,236...2,257,078
Ensembl chrNW_004955483:2,048,324...2,256,589
JBrowse link
G Scrib scribble planar cell polarity protein ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chrNW_004955454:2,461,526...2,482,734
Ensembl chrNW_004955454:2,461,760...2,482,098
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chrNW_004955496:666,728...732,829
Ensembl chrNW_004955496:666,404...717,862
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO (MGI:5578076|PMID:24920589) MGI PMID:24920589 MGI:5578076 NCBI chrNW_004955553:1,639,267...1,656,850
Ensembl chrNW_004955553:1,639,267...1,656,850
JBrowse link
G Sod1 superoxide dismutase 1 ISO (MGI:1344578|PMID:10466888), (MGI:3700629|PMID:10464373) MGI PMID:10464373, PMID:10466888 MGI:1344578, MGI:3700629 NCBI chrNW_004955407:31,261,451...31,267,657
Ensembl chrNW_004955407:31,263,863...31,267,727
JBrowse link
G Strc stereocilin ISO (MGI:3818235|PMID:18849963)
(MGI:5430850|PMID:21165971)
MGI
UniProt
PMID:18849963, PMID:21165971 MGI:3818235, MGI:5430850 NCBI chrNW_004955416:10,139,420...10,141,906 JBrowse link
G Tprn taperin ISO (MGI:6278501|PMID:30380417) MGI PMID:30380417 MGI:6278501 NCBI chrNW_004955513:5,196,871...5,205,945
Ensembl chrNW_004955513:5,197,280...5,203,445
JBrowse link
G Whrn whirlin ISO (MGI:5796227|PMID:27117407) MGI PMID:27117407 MGI:5796227 NCBI chrNW_004955419:13,116,001...13,207,266
Ensembl chrNW_004955419:13,116,001...13,207,266
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11892
    developmental process 5616
      anatomical structure morphogenesis 2502
        embryonic morphogenesis 626
          auditory receptor cell morphogenesis 23
            auditory receptor cell stereocilium organization 20
Path 2
Term Annotations click to browse term
  biological_process 11892
    developmental process 5616
      anatomical structure development 5254
        multicellular organism development 4812
          system development 4532
            nervous system development 2347
              neurogenesis 1687
                generation of neurons 1551
                  neuron differentiation 1403
                    mechanoreceptor differentiation 86
                      inner ear receptor cell differentiation 79
                        inner ear auditory receptor cell differentiation 49
                          auditory receptor cell development 27
                            auditory receptor cell morphogenesis 23
                              auditory receptor cell stereocilium organization 20
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.