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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of phagocytosis, engulfment
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Accession:GO:0060099 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.


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negative regulation of phagocytosis, engulfment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a Cd300a molecule ISO (PMID:22302738) RGD PMID:22302738 NCBI chr10:103,437,978...103,451,170
Ensembl chr10:103,438,303...103,450,947
JBrowse link
G Siglec8 sialic acid binding Ig-like lectin 8 ISO (MGI:MGI:5529741|PMID:24227736) RGD PMID:24227736 MGI:MGI:5529741 NCBI chr 1:99,576,946...99,587,441
Ensembl chr 1:99,578,372...99,587,205
JBrowse link
positive regulation of engulfment of apoptotic cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 ISO
ISS
(MGI:MGI:3662940|PMID:16908670)
GO_REF:0000024
RGD
Alzheimers_University_of_Toronto
PMID:16908670 GO_REF:0000024, MGI:MGI:3662940 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (PMID:24990881) RGD PMID:24990881 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
positive regulation of phagocytosis, engulfment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor IMP RGD PMID:23238794 RGD:8696010 NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
JBrowse link
G Ano6 anoctamin 6 ISO (MGI:MGI:5634870|PMID:25651887) RGD PMID:25651887 MGI:MGI:5634870 NCBI chr 7:137,142,063...137,335,208
Ensembl chr 7:137,142,170...137,335,208
JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 ISO (MGI:MGI:6271154|PMID:25568335) RGD PMID:25568335 MGI:MGI:6271154 NCBI chr 7:26,256,179...26,306,128
Ensembl chr 7:26,256,459...26,306,126
JBrowse link
G C3 complement C3 IEA
ISO
GO_REF:0000107
UniProtKB:P05555 (MGI:MGI:5319446|PMID:22438044), (MGI:MGI:5905548|PMID:20199584), (MGI:MGI:6189359|PMID:22632727)
Ensembl
RGD
PMID:20199584, PMID:22438044, PMID:22632727 GO_REF:0000107, MGI:MGI:5319446, MGI:MGI:5905548, MGI:MGI:6189359 NCBI chr 9:9,721,137...9,747,084
Ensembl chr 9:9,721,105...9,747,167
JBrowse link
G Cd36 CD36 molecule ISO MGI:MGI:2447190 (MGI:MGI:3587138|PMID:16061696) RGD PMID:16061696 MGI:MGI:3587138 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G F2rl1 F2R like trypsin receptor 1 ISO (PMID:21501162) RGD PMID:21501162 NCBI chr 2:25,222,324...25,235,275
Ensembl chr 2:25,222,328...25,235,275
JBrowse link
G Fcgr1a Fc fragment of IgG receptor Ia IMP RGD PMID:19657115 RGD:9685698 NCBI chr 2:198,430,536...198,439,453
Ensembl chr 2:198,430,530...198,458,041
JBrowse link
G Gata2 GATA binding protein 2 IMP RGD PMID:12933836 RGD:632788 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Itga2 integrin subunit alpha 2 IMP RGD PMID:9284952 RGD:2307413 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Lbp lipopolysaccharide binding protein IDA RGD PMID:11104656 RGD:9685187 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464
JBrowse link
G Nckap1l NCK associated protein 1 like ISO
ISS
(MGI:MGI:3818191|PMID:19015308)
GO_REF:0000024
RGD
UniProt
PMID:19015308 GO_REF:0000024, MGI:MGI:3818191 NCBI chr 7:145,068,239...145,113,507
Ensembl chr 7:145,068,286...145,113,507
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IMP RGD PMID:15940641 RGD:8553017 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Rab31 RAB31, member RAS oncogene family ISS
ISO
GO_REF:0000024
(MGI:MGI:6271154|PMID:25568335)
UniProt
RGD
PMID:25568335 GO_REF:0000024, MGI:MGI:6271154 NCBI chr 9:113,370,072...113,504,606
Ensembl chr 9:113,370,033...113,504,605
JBrowse link
G Stap1 signal transducing adaptor family member 1 ISO (MGI:MGI:3831067|PMID:19100238) RGD PMID:19100238 MGI:MGI:3831067 NCBI chr14:23,575,400...23,604,984
Ensembl chr14:23,576,085...23,604,834
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (PMID:28855300)
(MGI:MGI:6304666|PMID:25631124)
RGD PMID:25631124, PMID:28855300 MGI:MGI:6304666 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
regulation of engulfment of apoptotic cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase ISS
ISO
GO_REF:0000024
(MGI:MGI:5436199|PMID:22503541), (MGI:MGI:5508294|PMID:11278875)
UniProt
RGD
PMID:11278875, PMID:22503541 GO_REF:0000024, MGI:MGI:5436199, MGI:MGI:5508294 NCBI chr10:56,953,692...56,962,145
Ensembl chr10:56,953,691...56,962,161
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      vesicle-mediated transport 1652
        endocytosis 677
          phagocytosis, engulfment 180
            regulation of phagocytosis, engulfment 19
              negative regulation of phagocytosis, engulfment + 2
              positive regulation of phagocytosis, engulfment + 16
              regulation of engulfment of apoptotic cell + 3
Path 2
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular component organization or biogenesis 6766
        cellular component organization 6510
          membrane organization 860
            membrane invagination 197
              plasma membrane invagination 189
                phagocytosis, engulfment 180
                  regulation of phagocytosis, engulfment 19
                    negative regulation of phagocytosis, engulfment + 2
                    positive regulation of phagocytosis, engulfment + 16
                    regulation of engulfment of apoptotic cell + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.