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ONTOLOGY REPORT - ANNOTATIONS


Term:inner ear receptor cell stereocilium organization
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Accession:GO:0060122 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of inner ear receptor cells.
Synonyms:exact_synonym: inner ear hair cell receptor stereocilium organization;   inner ear receptor stereocilium organisation
 related_synonym: inner ear receptor stereocilium organization and biogenesis


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inner ear receptor cell stereocilium organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrv1 adhesion G protein-coupled receptor V1 JBrowse link 2 8,926,843 9,504,455 RGD:1624291
G Alms1 ALMS1, centrosome and basal body associated protein JBrowse link 4 117,371,544 117,472,310 RGD:1624291
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:1624291
RGD:1600115
G Cecr2 CECR2, histone acetyl-lysine reader JBrowse link 4 153,217,521 153,327,153 RGD:1624291
RGD:1600115
G Cthrc1 collagen triple helix repeat containing 1 JBrowse link 7 77,966,722 77,977,004 RGD:1624291
RGD:1600115
G Fat4 FAT atypical cadherin 4 JBrowse link 2 125,751,818 125,879,398 RGD:1624291
RGD:1600115
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 JBrowse link 14 41,663,688 41,787,331 RGD:1624291
G Hes1 hes family bHLH transcription factor 1 JBrowse link 11 74,312,837 74,315,249 RGD:1624291
RGD:1600115
G Hes5 hes family bHLH transcription factor 5 JBrowse link 5 172,364,421 172,365,188 RGD:1624291
RGD:1600115
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 JBrowse link 2 95,320,147 95,322,701 RGD:1624291
G Ift20 intraflagellar transport 20 JBrowse link 10 65,805,808 65,811,353 RGD:1624291
RGD:1600115
G Ift27 intraflagellar transport 27 JBrowse link 7 119,393,384 119,409,710 RGD:1624291
RGD:1600115
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:1624291
RGD:13792537
G Kif3a kinesin family member 3a JBrowse link 10 38,918,705 38,953,958 RGD:1624291
RGD:1600115
G LOC103692150 thyrotropin receptor pseudogene JBrowse link 4 93,447,412 93,448,194 RGD:1624291
G Mks1 MKS transition zone complex subunit 1 JBrowse link 10 75,149,814 75,160,481 RGD:1624291
RGD:1600115
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,545 RGD:1624291
G Pcdh15 protocadherin related 15 JBrowse link 20 14,952,213 15,334,745 RGD:1624291
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:1624291
G Sdc4 syndecan 4 JBrowse link 3 160,872,503 160,891,190 RGD:1624291
RGD:1600115
G Trip11 thyroid hormone receptor interactor 11 JBrowse link 6 125,741,520 125,812,926 RGD:1624291
RGD:1600115
G Tshr thyroid stimulating hormone receptor JBrowse link 6 115,170,290 115,306,871 RGD:1600115
G Ttc8 tetratricopeptide repeat domain 8 JBrowse link 6 122,920,308 122,974,525 RGD:1624291
RGD:1600115
G Ush1c USH1 protein network component harmonin JBrowse link 1 102,207,096 102,256,779 RGD:1624291
RGD:13792537
G Ush1g USH1 protein network component sans JBrowse link 10 103,866,566 103,873,416 RGD:1624291
RGD:1600115
G Vangl2 VANGL planar cell polarity protein 2 JBrowse link 13 90,379,203 90,405,627 RGD:1624291
RGD:1600115
G Whrn whirlin JBrowse link 5 79,235,541 79,317,206 RGD:1600115
RGD:1624291
auditory receptor cell stereocilium organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 JBrowse link 4 145,704,779 145,948,997 RGD:1624291
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:1624291
G Clic5 chloride intracellular channel 5 JBrowse link 9 19,121,676 19,372,673 RGD:1624291
RGD:13792537
G Clrn1 clarin 1 JBrowse link 2 149,049,925 149,088,787 RGD:1600115
RGD:1624291
G Lhfpl5 LHFPL tetraspan subfamily member 5 JBrowse link 20 5,815,837 5,826,137 RGD:1624291
RGD:1600115
G Myo3a myosin IIIA JBrowse link 17 88,952,635 89,167,538 RGD:1624291
G Myo3b myosin IIIB JBrowse link 3 56,355,433 56,717,740 RGD:1624291
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,545 RGD:1624291
RGD:1600115
G Pcdh15 protocadherin related 15 JBrowse link 20 14,952,213 15,334,745 RGD:1624291
G Pdzd7 PDZ domain containing 7 JBrowse link 1 264,776,393 264,796,206 RGD:1624291
RGD:13792537
G Rest RE1-silencing transcription factor JBrowse link 14 33,131,985 33,152,019 RGD:1600115
RGD:1624291
G Ripor2 RHO family interacting cell polarization regulator 2 JBrowse link 17 42,324,594 42,549,907 RGD:1624291
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:1624291
RGD:1600115
G Sec24b SEC24 homolog B, COPII coat complex component JBrowse link 2 230,286,886 230,356,887 RGD:1624291
RGD:1600115
G Slc9a3r1 SLC9A3 regulator 1 JBrowse link 10 103,713,045 103,730,145 RGD:1624291
RGD:1600115
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:1600115
RGD:1624291
G Strc stereocilin JBrowse link 3 113,324,403 113,343,513 RGD:1624291
RGD:1600115
G Triobp TRIO and F-actin binding protein JBrowse link 7 120,173,892 120,237,145 RGD:1624291
RGD:1600115
G Whrn whirlin JBrowse link 5 79,235,541 79,317,206 RGD:1624291
RGD:13792537
RGD:1600115
stereocilium maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tprn taperin JBrowse link 3 2,480,232 2,487,710 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18166
    developmental process 6539
      anatomical structure development 6020
        cell development 2453
          neuron development 1273
            neuron projection development 1126
              inner ear receptor cell stereocilium organization 42
                auditory receptor cell stereocilium organization 19
                stereocilium maintenance 1
                vestibular receptor cell stereocilium organization 0
Path 2
Term Annotations click to browse term
  biological_process 18166
    developmental process 6539
      anatomical structure development 6020
        multicellular organism development 5501
          system development 5050
            nervous system development 2583
              neurogenesis 1869
                generation of neurons 1735
                  neuron differentiation 1563
                    mechanoreceptor differentiation 89
                      inner ear receptor cell differentiation 82
                        inner ear receptor cell development 60
                          inner ear receptor cell stereocilium organization 42
                            auditory receptor cell stereocilium organization 19
                            stereocilium maintenance 1
                            vestibular receptor cell stereocilium organization 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.