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ONTOLOGY REPORT - ANNOTATIONS


Term:definitive hemopoiesis
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Accession:GO:0060216 term browser browse the term
Definition:A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood.
Synonyms:exact_synonym: definitive haemopoiesis;   definitive hematopoiesis
 related_synonym: definitive haematopoiesis


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definitive hemopoiesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adar adenosine deaminase, RNA-specific JBrowse link 2 189,045,551 189,085,448 RGD:1624291
RGD:1600115
G Bcr BCR activator of RhoGEF and GTPase JBrowse link 20 14,421,250 14,546,406 RGD:1624291
G Cbfb core-binding factor subunit beta JBrowse link 19 37,127,508 37,171,075 RGD:1624291
G Gata2 GATA binding protein 2 JBrowse link 4 120,129,028 120,142,490 RGD:1624291
G Hoxa9 homeobox A9 RGD:1624291
G Hoxb3 homeo box B3 JBrowse link 10 84,170,629 84,196,823 RGD:1624291
G Hoxb4 homeo box B4 JBrowse link 10 84,167,331 84,169,913 RGD:1624291
G Kmt2a lysine methyltransferase 2A JBrowse link 8 49,110,407 49,185,872 RGD:1624291
G Lyl1 LYL1, basic helix-loop-helix family member JBrowse link 19 25,815,207 25,818,074 RGD:1624291
RGD:1600115
G Meis1 Meis homeobox 1 JBrowse link 14 103,182,178 103,321,809 RGD:1624291
G Mfap5 microfibril associated protein 5 JBrowse link 4 155,313,671 155,336,228 RGD:1624291
G Mpl MPL proto-oncogene, thrombopoietin receptor JBrowse link 5 137,268,412 137,282,032 RGD:1624291
G Runx1 RUNX family transcription factor 1 JBrowse link 11 32,765,147 33,003,061 RGD:1624291
G Sp1 Sp1 transcription factor JBrowse link 7 144,014,173 144,044,635 RGD:1624291
G Sp3 Sp3 transcription factor JBrowse link 3 59,644,579 59,689,011 RGD:1624291
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor JBrowse link 5 133,864,401 133,878,604 RGD:1624291
G Tgfbr3 transforming growth factor beta receptor 3 JBrowse link 14 3,506,416 3,680,508 RGD:1624291
G Zfp36l2 zinc finger protein 36, C3H type-like 2 JBrowse link 6 7,417,416 7,423,447 RGD:1624291
definitive erythrocyte differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 JBrowse link 10 84,780,644 84,789,800 RGD:1600115
RGD:1624291
G Ncor1 nuclear receptor co-repressor 1 JBrowse link 10 48,629,121 48,772,890 RGD:1624291
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 8 22,648,323 22,739,468 RGD:1624291
G Tgfbr3 transforming growth factor beta receptor 3 JBrowse link 14 3,506,416 3,680,508 RGD:1624291
G Zfpm1 zinc finger protein, multitype 1 JBrowse link 19 55,094,585 55,150,994 RGD:1624291
regulation of definitive erythrocyte differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gata1 GATA binding protein 1 JBrowse link X 15,273,937 15,281,759 RGD:1624291
G Rbfox2 RNA binding fox-1 homolog 2 JBrowse link 7 118,157,093 118,396,733 RGD:1624291
G Senp1 SUMO specific peptidase 1 JBrowse link 7 139,626,444 139,684,587 RGD:1624291
G Zfpm1 zinc finger protein, multitype 1 JBrowse link 19 55,094,585 55,150,994 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    immune system process 2798
      immune system development 1054
        hematopoietic or lymphoid organ development 991
          hemopoiesis 939
            definitive hemopoiesis 25
              definitive erythrocyte differentiation + 8
Path 2
Term Annotations click to browse term
  biological_process 19858
    developmental process 6735
      anatomical structure development 6181
        multicellular organism development 5638
          system development 5212
            immune system development 1054
              hematopoietic or lymphoid organ development 991
                hemopoiesis 939
                  definitive hemopoiesis 25
                    definitive erythrocyte differentiation + 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.