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ONTOLOGY REPORT - ANNOTATIONS


Term:definitive erythrocyte differentiation
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Accession:GO:0060318 term browser browse the term
Definition:Erythrocyte differentiation which occurs as part of the process of definitive hemopoiesis.
Synonyms:exact_synonym: definitive RBC differentiation;   definitive erythropoiesis;   definitive red blood cell differentiation


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definitive erythrocyte differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:MGI:6284072|PMID:30635284)
UniProt
Ensembl
RGD
PMID:30635284 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6284072 NCBI chr10:84,780,644...84,789,800
Ensembl chr10:84,780,608...84,789,832
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 ISO MGI:MGI:2677822 (MGI:MGI:1926554|PMID:11030619) RGD PMID:11030619 MGI:MGI:1926554 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO MGI:MGI:3611933 (MGI:MGI:3610843|PMID:16287714) RGD PMID:16287714 MGI:MGI:3610843 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 ISO (MGI:MGI:2663364|PMID:12773577) RGD PMID:12773577 MGI:MGI:2663364 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
G Zfpm1 zinc finger protein, multitype 1 ISO MGI:MGI:1857554 (MGI:MGI:1203256|PMID:9553047) RGD PMID:9553047 MGI:MGI:1203256 NCBI chr19:55,094,585...55,150,994
Ensembl chr19:55,094,585...55,150,686
JBrowse link
regulation of definitive erythrocyte differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata1 GATA binding protein 1 ISO (MGI:MGI:5284816|PMID:12200364)
(PMID:12200364), (PMID:15920471)
RGD PMID:12200364, PMID:15920471 MGI:MGI:5284816 NCBI chr  X:15,273,937...15,281,759
Ensembl chr  X:15,378,789...15,382,066
JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 ISO (MGI:MGI:3770484|PMID:17715393) RGD PMID:17715393 MGI:MGI:3770484 NCBI chr 7:118,157,093...118,396,733
Ensembl chr 7:118,156,946...118,396,728
JBrowse link
G Senp1 SUMO specific peptidase 1 ISO MGI:MGI:3818522 (MGI:MGI:3818351|PMID:17981124) RGD PMID:17981124 MGI:MGI:3818351 NCBI chr 7:139,626,444...139,684,587
Ensembl chr 7:139,630,515...139,675,245
JBrowse link
G Zfpm1 zinc finger protein, multitype 1 ISO (PMID:15920471), (PMID:17207461) RGD PMID:15920471, PMID:17207461 NCBI chr19:55,094,585...55,150,994
Ensembl chr19:55,094,585...55,150,686
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    immune system process 2837
      myeloid cell homeostasis 196
        erythrocyte homeostasis 157
          erythrocyte differentiation 146
            definitive erythrocyte differentiation 8
              regulation of definitive erythrocyte differentiation 4
Path 2
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure development 6256
        multicellular organism development 5735
          system development 5272
            immune system development 1073
              hematopoietic or lymphoid organ development 1008
                hemopoiesis 956
                  myeloid cell differentiation 433
                    erythrocyte differentiation 146
                      definitive erythrocyte differentiation 8
                        regulation of definitive erythrocyte differentiation 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.