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ONTOLOGY REPORT - ANNOTATIONS


Term:definitive erythrocyte differentiation
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Accession:GO:0060318 term browser browse the term
Definition:Erythrocyte differentiation which occurs as part of the process of definitive hemopoiesis.
Synonyms:exact_synonym: definitive RBC differentiation;   definitive erythropoiesis;   definitive red blood cell differentiation


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definitive erythrocyte differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5RAP3 CDK5 regulatory subunit associated protein 3 ISO (MGI:MGI:6284072|PMID:30635284) UniProt PMID:30635284 MGI:MGI:6284072 NCBI chr17:9,556,313...9,567,099
Ensembl chr17:9,738,141...9,749,302
JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO (MGI:MGI:1926554|PMID:11030619) MGI PMID:11030619 MGI:MGI:1926554 NCBI chr17:34,934,452...35,121,195 JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO (MGI:MGI:3610843|PMID:16287714) MGI PMID:16287714 MGI:MGI:3610843 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952
JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 ISO (MGI:MGI:2663364|PMID:12773577) BHF-UCL PMID:12773577 MGI:MGI:2663364 NCBI chr 1:94,337,275...94,539,229
Ensembl chr 1:93,080,452...93,285,587
JBrowse link
G ZFPM1 zinc finger protein, FOG family member 1 ISO (MGI:MGI:1203256|PMID:9553047) MGI PMID:9553047 MGI:MGI:1203256 NCBI chr16:69,164,299...69,246,136 JBrowse link
regulation of definitive erythrocyte differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA1 GATA binding protein 1 ISO (PMID:12200364), (PMID:15920471)
(MGI:MGI:5284816|PMID:12200364)
BHF-UCL PMID:12200364, PMID:15920471 MGI:MGI:5284816 NCBI chr  X:41,088,724...41,092,190
Ensembl chr  X:48,945,394...48,953,126
JBrowse link
G RBFOX2 RNA binding fox-1 homolog 2 ISO (MGI:MGI:3770484|PMID:17715393) BHF-UCL PMID:17715393 MGI:MGI:3770484 NCBI chr22:16,740,707...17,031,415
Ensembl chr22:34,586,044...34,870,257
JBrowse link
G SENP1 SUMO specific peptidase 1 ISO (MGI:MGI:3818351|PMID:17981124) MGI PMID:17981124 MGI:MGI:3818351 NCBI chr12:40,624,200...40,689,837
Ensembl chr12:41,507,348...41,558,969
JBrowse link
G ZFPM1 zinc finger protein, FOG family member 1 ISO (PMID:15920471)
(PMID:17207461)
BHF-UCL PMID:15920471, PMID:17207461 NCBI chr16:69,164,299...69,246,136 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12561
    immune system process 2073
      myeloid cell homeostasis 181
        erythrocyte homeostasis 142
          erythrocyte differentiation 131
            definitive erythrocyte differentiation 8
              regulation of definitive erythrocyte differentiation 4
Path 2
Term Annotations click to browse term
  biological_process 12561
    developmental process 5839
      anatomical structure development 5452
        multicellular organism development 4984
          system development 4688
            immune system development 968
              hematopoietic or lymphoid organ development 907
                hemopoiesis 859
                  myeloid cell differentiation 400
                    erythrocyte differentiation 131
                      definitive erythrocyte differentiation 8
                        regulation of definitive erythrocyte differentiation 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.