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ONTOLOGY REPORT - ANNOTATIONS


Term:bone development
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Accession:GO:0060348 term browser browse the term
Definition:The process whose specific outcome is the progression of bone over time, from its formation to the mature structure. Bone is the hard skeletal connective tissue consisting of both mineral and cellular components.


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bone development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap13 A-kinase anchoring protein 13 ISO
ISS
(MGI:MGI:5770225|PMID:25892096)
GO_REF:0000024
RGD
UniProt
PMID:25892096 GO_REF:0000024, MGI:MGI:5770225 NCBI chr 1:137,089,558...137,315,272
Ensembl chr 1:137,014,272...137,315,272
JBrowse link
G Amer1 APC membrane recruitment protein 1 ISO MGI:MGI:2446599|MGI:MGI:5086003 (MGI:MGI:5013668|PMID:21571217) RGD PMID:21571217 MGI:MGI:5013668 NCBI chr  X:64,686,620...64,702,504
Ensembl chr  X:64,686,623...64,702,441
JBrowse link
G Ankrd11 ankyrin repeat domain 11 ISO MGI:MGI:3797584 (MGI:MGI:3796348|PMID:17986521) RGD PMID:17986521 MGI:MGI:3796348 NCBI chr19:55,703,831...55,862,446
Ensembl chr19:55,703,824...55,737,500
JBrowse link
G Asxl1 ASXL transcriptional regulator 1 ISO (MGI:MGI:5439228|PMID:22876197) RGD PMID:22876197 MGI:MGI:5439228 NCBI chr 3:148,832,231...148,902,356
Ensembl chr 3:148,837,814...148,900,452
JBrowse link
G Bbx BBX high mobility group box domain containing ISO (MGI:MGI:5439228|PMID:22876197) RGD PMID:22876197 MGI:MGI:5439228 NCBI chr11:52,983,286...53,228,557
Ensembl chr11:53,081,025...53,228,716
JBrowse link
G Bglap bone gamma-carboxyglutamate protein IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:3488316, PMID:21873635 RGD:2316176, RGD:13792537 NCBI chr 2:187,741,770...187,748,445
Ensembl chr 2:187,741,770...187,742,747
JBrowse link
G Bgn biglycan ISO MGI:MGI:107942 (MGI:MGI:5644410|PMID:19932218) RGD PMID:19932218 MGI:MGI:5644410 NCBI chr  X:157,319,042...157,331,204
Ensembl chr  X:157,319,046...157,331,204
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO (MGI:MGI:63654|PMID:8358941) RGD PMID:8358941 MGI:MGI:63654 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Cadm1 cell adhesion molecule 1 ISO (MGI:MGI:5439228|PMID:22876197) RGD PMID:22876197 MGI:MGI:5439228 NCBI chr 8:51,858,906...52,200,591
Ensembl chr 8:52,127,399...52,189,722
JBrowse link
G Ccn4 cellular communication network factor 4 IEA
ISO
GO_REF:0000107
(MGI:MGI:5788182|PMID:25864198), (MGI:MGI:6294593|PMID:15331410)
Ensembl
RGD
PMID:15331410, PMID:25864198 GO_REF:0000107, MGI:MGI:5788182, MGI:MGI:6294593 NCBI chr 7:107,695,227...107,723,759
Ensembl chr 7:107,695,215...107,723,772
JBrowse link
G Cfh complement factor H ISO (MGI:MGI:4421084|PMID:19828624) RGD PMID:19828624 MGI:MGI:4421084 NCBI chr13:56,979,155...57,080,540
Ensembl chr13:56,978,607...57,080,622
JBrowse link
G Chad chondroadherin ISO
IEA
MGI:MGI:5529270 (MGI:MGI:5525032|PMID:23755099)
GO_REF:0000107
RGD
Ensembl
PMID:23755099 GO_REF:0000107, MGI:MGI:5525032 NCBI chr10:82,290,296...82,296,146
Ensembl chr10:82,292,110...82,296,651
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO MGI:MGI:2148858 (MGI:MGI:1933050|PMID:11254354) RGD PMID:11254354 MGI:MGI:1933050 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Cr2 complement C3d receptor 2 ISO (MGI:MGI:4421084|PMID:19828624) RGD PMID:19828624 MGI:MGI:4421084 NCBI chr13:113,890,274...113,927,824
Ensembl chr13:113,890,272...113,927,877
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP RGD PMID:15012600 RGD:4891061 NCBI chr 8:58,744,849...58,772,408
Ensembl chr 8:58,744,849...58,772,408
JBrowse link
G Dbh dopamine beta-hydroxylase IEP RGD PMID:20090303 RGD:5129678 NCBI chr 3:5,709,236...5,731,895
Ensembl chr 3:5,709,236...5,731,898
JBrowse link
G Dym dymeclin ISO
IEA
ISS
(PMID:21280149)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21280149 GO_REF:0000024, GO_REF:0000107 NCBI chr18:70,996,074...71,313,033
Ensembl chr18:70,996,044...71,313,084
JBrowse link
G Eng endoglin IEP humerus RGD PMID:20865666 RGD:7257537 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Epyc epiphycan ISO MGI:MGI:5762921|MGI:MGI:88158 (MGI:MGI:5644410|PMID:19932218) RGD PMID:19932218 MGI:MGI:5644410 NCBI chr 7:38,897,278...38,934,989
Ensembl chr 7:38,897,278...38,934,985
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO (PMID:18596921) RGD PMID:18596921 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:3629660 (MGI:MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:MGI:3688953 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO MGI:MGI:2135670 (MGI:MGI:4437389|PMID:20053668) RGD PMID:20053668 MGI:MGI:4437389 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Gja1 gap junction protein, alpha 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:6274948|PMID:25270829)
UniProt
RGD
PMID:25270829 GO_REF:0000024, MGI:MGI:6274948 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gnas GNAS complex locus ISO (PMID:12719376) RGD PMID:12719376 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483
JBrowse link
G Hoxa11 homeobox A11 ISO MGI:MGI:2135973 (MGI:MGI:72977|PMID:7789268) RGD PMID:7789268 MGI:MGI:72977 NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503
Ensembl chr 4:82,298,152...82,300,503
JBrowse link
G Hsd17b1 hydroxysteroid (17-beta) dehydrogenase 1 IEP RGD PMID:15012600 RGD:4891061 NCBI chr10:88,987,558...88,989,758
Ensembl chr10:88,987,558...88,989,757
JBrowse link
G Hsd17b2 hydroxysteroid (17-beta) dehydrogenase 2 IEP RGD PMID:15012600 RGD:4891061 NCBI chr19:50,246,404...50,317,892
Ensembl chr19:50,246,402...50,317,891
JBrowse link
G Idua alpha-L-iduronidase ISO MGI:MGI:4415188 (MGI:MGI:4414887|PMID:19751987) RGD PMID:19751987 MGI:MGI:4414887 NCBI chr14:2,041,828...2,056,762
Ensembl chr14:2,042,411...2,056,762
JBrowse link
G Ift172 intraflagellar transport 172 ISO MGI:MGI:4821824 (MGI:MGI:5285455|PMID:21653639) RGD PMID:21653639 MGI:MGI:5285455 NCBI chr 6:26,390,686...26,485,459 JBrowse link
G Igf1 insulin-like growth factor 1 IEP RGD PMID:24735836 RGD:11352746 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Itgb6 integrin subunit beta 6 ISO (MGI:MGI:6454091|PMID:30467097) RGD PMID:30467097 MGI:MGI:6454091 NCBI chr 3:46,652,624...46,775,362
Ensembl chr 3:46,652,623...46,726,958
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO (MGI:MGI:4835143|PMID:17700537) RGD PMID:17700537 MGI:MGI:4835143 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Mcph1 microcephalin 1 ISO MGI:MGI:4431685 (MGI:MGI:5502489|PMID:23516444) RGD PMID:23516444 MGI:MGI:5502489 NCBI chr16:75,904,087...76,110,624
Ensembl chr16:75,904,006...76,110,553
JBrowse link
G Miga2 mitoguardin 2 ISO (MGI:MGI:5439228|PMID:22876197) RGD PMID:22876197 MGI:MGI:5439228 NCBI chr 3:8,928,484...8,951,189
Ensembl chr 3:8,928,534...8,951,189
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO MGI:MGI:1276107 (MGI:MGI:3771253|PMID:18022611) RGD PMID:18022611 MGI:MGI:3771253 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Mmp16 matrix metallopeptidase 16 ISO MGI:MGI:2445723 (MGI:MGI:3771253|PMID:18022611) RGD PMID:18022611 MGI:MGI:3771253 NCBI chr 5:31,568,344...31,818,368
Ensembl chr 5:31,568,419...31,810,484
JBrowse link
G Myoc myocilin IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5503270|PMID:23629661)
Ensembl
UniProt
RGD
PMID:23629661 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5503270 NCBI chr13:80,517,531...80,527,928
Ensembl chr13:80,517,536...80,527,928
JBrowse link
G Nos3 nitric oxide synthase 3 IEP femur RGD PMID:10352094 RGD:7794707 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link
G Npr2 natriuretic peptide receptor 2 ISO MGI:MGI:1856702 (MGI:MGI:54411|PMID:624676) RGD PMID:624676 MGI:MGI:54411 NCBI chr 5:59,128,186...59,147,321
Ensembl chr 5:59,128,315...59,147,255
JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 ISO MGI:MGI:3851507 (MGI:MGI:3850584|PMID:19483677) RGD PMID:19483677 MGI:MGI:3850584 NCBI chr14:82,119,210...82,196,501
Ensembl chr14:82,119,210...82,171,480
JBrowse link
G Opa3 outer mitochondrial membrane lipid metabolism regulator OPA3 ISO MGI:MGI:5312669 (MGI:MGI:5810498|PMID:27106103) RGD PMID:27106103 MGI:MGI:5810498 NCBI chr 1:80,141,630...80,160,145
Ensembl chr 1:80,141,630...80,160,145
JBrowse link
G P3h1 prolyl 3-hydroxylase 1 IEA
ISO
GO_REF:0000107
(PMID:17277775), (PMID:22615817)
Ensembl
RGD
PMID:17277775, PMID:22615817 GO_REF:0000107 NCBI chr 5:138,279,597...138,294,280
Ensembl chr 5:138,279,506...138,294,262
JBrowse link
G Papss2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 ISO MGI:MGI:1856688 (MGI:MGI:54411|PMID:624676) RGD PMID:624676 MGI:MGI:54411 NCBI chr 1:251,145,264...251,230,716
Ensembl chr 1:251,145,253...251,230,715
JBrowse link
G Pdgfa platelet derived growth factor subunit A ISO MGI:MGI:1859631 (MGI:MGI:5543868|PMID:23938297) RGD PMID:23938297 MGI:MGI:5543868 NCBI chr12:17,734,141...17,756,186
Ensembl chr12:17,734,133...17,755,285
JBrowse link
G Pdgfc platelet derived growth factor C ISO MGI:MGI:97527 (MGI:MGI:5543868|PMID:23938297) RGD PMID:23938297 MGI:MGI:5543868 NCBI chr 2:179,952,227...180,126,897
Ensembl chr 2:179,952,227...180,128,283
JBrowse link
G Phex phosphate regulating endopeptidase homolog, X-linked IEP RGD PMID:11064151 RGD:11556272 NCBI chr  X:40,460,047...40,717,982
Ensembl chr  X:40,460,047...40,717,982
JBrowse link
G Pls3 plastin 3 IEA
ISO
GO_REF:0000107
(PMID:24088043)
Ensembl
RGD
PMID:24088043 GO_REF:0000107 NCBI chr  X:119,030,311...119,124,268
Ensembl chr  X:119,030,419...119,124,250
JBrowse link
G Poc1a POC1 centriolar protein A ISO MGI:MGI:2135614 (MGI:MGI:5700251|PMID:26496357) RGD PMID:26496357 MGI:MGI:5700251 NCBI chr 8:114,982,764...115,050,844
Ensembl chr 8:114,986,326...115,050,728
JBrowse link
G Ppib peptidylprolyl isomerase B ISO (PMID:20089953) RGD PMID:20089953 NCBI chr 8:71,719,681...71,725,538
Ensembl chr 8:71,719,563...71,725,562
JBrowse link
G Prpsap2 phosphoribosyl pyrophosphate synthetase-associated protein 2 ISO (MGI:MGI:5439228|PMID:22876197) RGD PMID:22876197 MGI:MGI:5439228 NCBI chr10:48,008,799...48,044,435
Ensembl chr10:48,008,802...48,044,344
JBrowse link
G Ptger4 prostaglandin E receptor 4 IDA PMID:19233324 UniProt PMID:19233324 RGD:8554254 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Rara retinoic acid receptor, alpha ISO MGI:MGI:97858 (MGI:MGI:1096258|PMID:9376317), (MGI:MGI:69060|PMID:7607067) RGD PMID:7607067, PMID:9376317 MGI:MGI:1096258, MGI:MGI:69060 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G Rarb retinoic acid receptor, beta ISO MGI:MGI:97858 (MGI:MGI:69060|PMID:7607067) RGD PMID:7607067 MGI:MGI:69060 NCBI chr15:9,915,223...10,262,599
Ensembl chr15:10,120,206...10,262,599
JBrowse link
G Rarg retinoic acid receptor, gamma ISO MGI:MGI:97856|MGI:MGI:97857 (MGI:MGI:1096258|PMID:9376317), (MGI:MGI:3848572|PMID:19389355), (MGI:MGI:69060|PMID:7607067) RGD PMID:7607067, PMID:9376317, PMID:19389355 MGI:MGI:1096258, MGI:MGI:3848572, MGI:MGI:69060 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186
JBrowse link
G Rpl13 ribosomal protein L13 ISO (PMID:31630789) RGD PMID:31630789 NCBI chr19:55,917,489...55,920,040
Ensembl chr19:55,917,736...55,919,996
JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ISO (MGI:MGI:5439228|PMID:22876197) RGD PMID:22876197 MGI:MGI:5439228 NCBI chr 2:196,495,867...196,527,412
Ensembl chr 2:196,495,867...196,527,127
JBrowse link
G Sh3pxd2b SH3 and PX domains 2B ISO (PMID:20137777)
(MGI:MGI:4439252|PMID:20137777)
RGD PMID:20137777 MGI:MGI:4439252 NCBI chr10:17,209,152...17,296,449
Ensembl chr10:17,209,212...17,291,876
JBrowse link
G Slc10a7 solute carrier family 10, member 7 ISO (PMID:30082715)
(MGI:MGI:6198941|PMID:30082715)
RGD PMID:30082715 MGI:MGI:6198941 NCBI chr19:32,857,984...33,081,359
Ensembl chr19:32,855,343...33,080,998
JBrowse link
G Slc38a10 solute carrier family 38, member 10 ISO (MGI:MGI:5439228|PMID:22876197) RGD PMID:22876197 MGI:MGI:5439228 NCBI chr10:109,284,054...109,333,907
Ensembl chr10:109,284,957...109,333,899
JBrowse link
G Smad1 SMAD family member 1 ISO
IEA
MGI:MGI:1328787|MGI:MGI:1859993 (MGI:MGI:3840027|PMID:19224984)
GO_REF:0000107
RGD
Ensembl
PMID:19224984 GO_REF:0000107, MGI:MGI:3840027 NCBI chr19:32,182,942...32,248,694
Ensembl chr19:32,188,267...32,248,684
JBrowse link
G Smad5 SMAD family member 5 ISO MGI:MGI:109452|MGI:MGI:1859993 (MGI:MGI:3840027|PMID:19224984) RGD PMID:19224984 MGI:MGI:3840027 NCBI chr17:8,307,448...8,336,996
Ensembl chr17:8,311,796...8,331,032
JBrowse link
G Smad9 SMAD family member 9 ISO MGI:MGI:109452|MGI:MGI:1328787 (MGI:MGI:3840027|PMID:19224984) RGD PMID:19224984 MGI:MGI:3840027 NCBI chr 2:143,951,725...144,002,025
Ensembl chr 2:144,191,846...144,212,138
Ensembl chr 2:144,191,846...144,212,138
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 ISO (MGI:MGI:5805317|PMID:27325675) RGD PMID:27325675 MGI:MGI:5805317 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO (MGI:MGI:5439228|PMID:22876197) RGD PMID:22876197 MGI:MGI:5439228 NCBI chr10:40,742,390...40,764,232
Ensembl chr10:40,742,400...40,764,185
JBrowse link
G Spns2 sphingolipid transporter 2 ISO (MGI:MGI:5439228|PMID:22876197) RGD PMID:22876197 MGI:MGI:5439228 NCBI chr10:59,010,428...59,049,482
Ensembl chr10:59,010,428...59,049,482
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:15012600 RGD:4891061 NCBI chr 1:36,320,504...36,354,694
Ensembl chr 1:36,320,461...36,354,756
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 IEP RGD PMID:15012600 RGD:4891061 NCBI chr 6:25,279,635...25,315,501
Ensembl chr 6:25,279,626...25,315,511
JBrowse link
G Stc1 stanniocalcin 1 ISO (PMID:16377640) RGD PMID:16377640 NCBI chr15:50,891,137...50,901,791
Ensembl chr15:50,891,127...50,903,162
JBrowse link
G Sulf1 sulfatase 1 ISO
IEA
ISS
UniProtKB:Q8CFG0 (MGI:MGI:3769052|PMID:17593974)
GO_REF:0000104
GO_REF:0000024
RGD
UniProt
PMID:17593974 GO_REF:0000024, GO_REF:0000104, MGI:MGI:3769052 NCBI chr 5:5,999,520...6,186,901
Ensembl chr 5:5,999,475...6,186,329
JBrowse link
G Sulf2 sulfatase 2 ISO UniProtKB:Q8K007 (MGI:MGI:3769052|PMID:17593974) RGD PMID:17593974 MGI:MGI:3769052 NCBI chr 3:162,791,349...162,872,984
Ensembl chr 3:162,791,355...162,872,831
JBrowse link
G Tmem38b transmembrane protein 38B ISO MGI:MGI:1921416 (MGI:MGI:6141091|PMID:27188440) RGD PMID:27188440 MGI:MGI:6141091 NCBI chr 5:70,639,156...70,675,055
Ensembl chr 5:70,639,156...70,675,054
JBrowse link
G Tnfsf11 TNF superfamily member 11 ISO MGI:MGI:5614816 (MGI:MGI:5646594|PMID:26234751) RGD PMID:26234751 MGI:MGI:5646594 NCBI chr15:60,482,527...60,512,704
Ensembl chr15:60,482,527...60,512,704
JBrowse link
G Trim45 tripartite motif-containing 45 ISO (MGI:MGI:5439228|PMID:22876197) RGD PMID:22876197 MGI:MGI:5439228 NCBI chr 2:203,301,838...203,310,532
Ensembl chr 2:203,301,838...203,310,532
JBrowse link
G Trip11 thyroid hormone receptor interactor 11 ISO MGI:MGI:3836913|MGI:MGI:4829605 (MGI:MGI:4822550|PMID:20089971) RGD PMID:20089971 MGI:MGI:4822550 NCBI chr 6:125,741,520...125,812,926
Ensembl chr 6:125,742,796...125,812,517
JBrowse link
G Ttc9 tetratricopeptide repeat domain 9 ISO (MGI:MGI:5903425|PMID:25798063) RGD PMID:25798063 MGI:MGI:5903425 NCBI chr 6:105,364,668...105,399,500
Ensembl chr 6:105,364,668...105,399,500
JBrowse link
G Tulp3 TUB like protein 3 ISO MGI:MGI:2388066 (MGI:MGI:2136130|PMID:11406614) RGD PMID:11406614 MGI:MGI:2136130 NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
JBrowse link
G Twist1 twist family bHLH transcription factor 1 IEP RGD PMID:8773900 RGD:5131604 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Vkorc1 vitamin K epoxide reductase complex, subunit 1 ISO
ISS
(MGI:MGI:5559848|PMID:19492146)
GO_REF:0000024
RGD
UniProt
PMID:19492146 GO_REF:0000024, MGI:MGI:5559848 NCBI chr 1:199,338,785...199,341,306
Ensembl chr 1:199,337,138...199,341,302
JBrowse link
G Wnt1 Wnt family member 1 ISO (PMID:23499309) RGD PMID:23499309 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
baculum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr1 estrogen receptor 1 IEP RGD PMID:21471296 RGD:8552989 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
bone marrow development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034833.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:53,872...54,885 JBrowse link
G AABR07071701.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:126,975,833...126,976,850 JBrowse link
G Asxl1 ASXL transcriptional regulator 1 ISO MGI:MGI:4418244 (MGI:MGI:4418016|PMID:19861679) RGD PMID:19861679 MGI:MGI:4418016 NCBI chr 3:148,832,231...148,902,356
Ensembl chr 3:148,837,814...148,900,452
JBrowse link
G Ctc1 CST telomere replication complex component 1 ISO MGI:MGI:5427642 (MGI:MGI:5426340|PMID:22531781) RGD PMID:22531781 MGI:MGI:5426340 NCBI chr10:55,596,172...55,616,873
Ensembl chr10:55,596,148...55,616,889
JBrowse link
G Hoxb4 homeo box B4 ISO MGI:MGI:3045971 (MGI:MGI:3045582|PMID:14962901) RGD PMID:14962901 MGI:MGI:3045582 NCBI chr10:84,167,331...84,169,913
Ensembl chr10:84,167,331...84,169,907
JBrowse link
G LOC102554748 nidogen-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:380,313...427,615
Ensembl chr 7:380,741...381,732
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO
IBA
(PMID:17680723)
PMID:21873635
RGD PMID:17680723, PMID:21873635 RGD:13792537 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Lrrc17 leucine rich repeat containing 17 ISO (MGI:MGI:3850892|PMID:19336404) RGD PMID:19336404 MGI:MGI:3850892 NCBI chr 4:10,108,184...10,138,652
Ensembl chr 4:10,108,192...10,138,652
JBrowse link
G Mir188 microRNA 188 ISO (MGI:MGI:5643971|PMID:25751060) RGD PMID:25751060 MGI:MGI:5643971 NCBI chr  X:16,110,270...16,110,349
Ensembl chr  X:16,110,270...16,110,349
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C ISO (PMID:21911094) RGD PMID:21911094 NCBI chr13:55,061,561...55,174,150
Ensembl chr13:55,061,562...55,173,692
JBrowse link
G Sbds SBDS, ribosome maturation factor ISO (PMID:15342903) RGD PMID:15342903 NCBI chr12:29,921,443...29,930,602
Ensembl chr12:29,921,443...29,930,600
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:30146126) RGD PMID:30146126 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr3 fibroblast growth factor receptor 3 ISO (MGI:MGI:4457789|PMID:20582225) RGD PMID:20582225 MGI:MGI:4457789 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Gh1 growth hormone 1 ISO (PMID:20110402) RGD PMID:20110402 NCBI chr10:94,486,204...94,488,181
Ensembl chr10:94,486,205...94,488,180
JBrowse link
G Mbtps2 membrane-bound transcription factor peptidase, site 2 ISO (PMID:27380894) RGD PMID:27380894 NCBI chr  X:40,258,933...40,309,047
Ensembl chr  X:40,258,493...40,310,563
JBrowse link
bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 ISO MGI:MGI:4127698 (MGI:MGI:5486117|PMID:22936354) RGD PMID:22936354 MGI:MGI:5486117 NCBI chr 7:137,142,063...137,335,208
Ensembl chr 7:137,142,170...137,335,208
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO
ISS
(PMID:16433617)
GO_REF:0000024
RGD
UniProt
PMID:16433617 GO_REF:0000024 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Ccdc154 coiled-coil domain containing 154 ISO MGI:MGI:5702426 (MGI:MGI:5697796|PMID:20121924) RGD PMID:20121924 MGI:MGI:5697796 NCBI chr10:14,518,240...14,529,920
Ensembl chr10:14,519,164...14,528,277
JBrowse link
G Ift80 intraflagellar transport 80 ISO MGI:MGI:3689350|MGI:MGI:5818514 (MGI:MGI:5807019|PMID:26996322) RGD PMID:26996322 MGI:MGI:5807019 NCBI chr 2:165,506,878...165,600,748
Ensembl chr 2:165,505,810...165,600,748
JBrowse link
G Igf1 insulin-like growth factor 1 ISO
IEA
(PMID:16433617)
GO_REF:0000107
RGD
Ensembl
PMID:16433617 GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Lep leptin IDA RGD PMID:21353474 RGD:5128507 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 ISO
IBA
MGI:MGI:5049904 (MGI:MGI:5008224|PMID:21272676)
PMID:21873635
RGD PMID:21272676, PMID:21873635 MGI:MGI:5008224, RGD:13792537 NCBI chr10:83,635,557...83,643,862
Ensembl chr10:83,636,518...83,643,859
JBrowse link
G Snx10 sorting nexin 10 ISO MGI:MGI:5690193 (MGI:MGI:5688814|PMID:25811986) RGD PMID:25811986 MGI:MGI:5688814 NCBI chr 4:81,311,490...81,375,248
Ensembl chr 4:81,311,490...81,374,158
JBrowse link
bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034833.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:53,872...54,885 JBrowse link
G AABR07071701.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:126,975,833...126,976,850 JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant ISO
IEA
MGI:MGI:2180086 (MGI:MGI:83673|PMID:8898228)
GO_REF:0000107
RGD
Ensembl
PMID:8898228 GO_REF:0000107, MGI:MGI:83673 NCBI chr 8:23,142,733...23,149,067
Ensembl chr 8:23,142,734...23,148,396
JBrowse link
G Actn3 actinin alpha 3 ISO (MGI:MGI:5291888|PMID:21784188) RGD PMID:21784188 MGI:MGI:5291888 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Cdx1 caudal type homeo box 1 ISO
IEA
MGI:MGI:2154514|MGI:MGI:97858 (MGI:MGI:2154839|PMID:11784046)
GO_REF:0000107
RGD
Ensembl
PMID:11784046 GO_REF:0000107, MGI:MGI:2154839 NCBI chr18:56,337,485...56,355,477
Ensembl chr18:56,338,336...56,355,490
JBrowse link
G Chsy1 chondroitin sulfate synthase 1 ISO MGI:MGI:5007063 (MGI:MGI:5316547|PMID:22280990) RGD PMID:22280990 MGI:MGI:5316547 NCBI chr 1:127,010,587...127,071,570
Ensembl chr 1:127,010,588...127,071,570
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO MGI:MGI:2179740 (MGI:MGI:4457799|PMID:20549734) RGD PMID:20549734 MGI:MGI:4457799 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Col9a1 collagen type IX alpha 1 chain ISO MGI:MGI:88469 (MGI:MGI:3807836|PMID:18191556) RGD PMID:18191556 MGI:MGI:3807836 NCBI chr 9:30,419,001...30,502,307
Ensembl chr 9:30,419,001...30,502,298
JBrowse link
G Comp cartilage oligomeric matrix protein ISO MGI:MGI:88465 (MGI:MGI:3807836|PMID:18191556) RGD PMID:18191556 MGI:MGI:3807836 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 ISO (PMID:22019272) RGD PMID:22019272 NCBI chr 4:116,261,796...116,278,615
Ensembl chr 4:116,261,796...116,278,615
JBrowse link
G Dhrs3 dehydrogenase/reductase 3 ISO MGI:MGI:5007106 (MGI:MGI:5528782|PMID:24005908) RGD PMID:24005908 MGI:MGI:5528782 NCBI chr 5:162,809,090...162,843,385
Ensembl chr 5:162,808,646...162,843,383
JBrowse link
G Dlx5 distal-less homeobox 5 ISO MGI:MGI:2180474 (MGI:MGI:3611627|PMID:16330189) RGD PMID:16330189 MGI:MGI:3611627 NCBI chr 4:32,387,741...32,392,085
Ensembl chr 4:32,387,741...32,392,007
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:4431165|PMID:20080592), (MGI:MGI:4834113|PMID:20404326) RGD PMID:20080592, PMID:20404326 MGI:MGI:4431165, MGI:MGI:4834113 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:2153799 (MGI:MGI:1346744|PMID:10518547) RGD PMID:10518547 MGI:MGI:1346744 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO MGI:MGI:1931521 (MGI:MGI:4352984|PMID:19407216), (MGI:MGI:4457789|PMID:20582225) RGD PMID:19407216, PMID:20582225 MGI:MGI:4352984, MGI:MGI:4457789 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Glg1 golgi glycoprotein 1 ISO
IEA
MGI:MGI:4829764 (MGI:MGI:4829577|PMID:20530870)
GO_REF:0000107
RGD
Ensembl
PMID:20530870 GO_REF:0000107, MGI:MGI:4829577 NCBI chr19:42,983,879...43,088,074
Ensembl chr19:42,983,869...43,090,841
JBrowse link
G Has2 hyaluronan synthase 2 ISO MGI:MGI:2176070|MGI:MGI:4360705 (MGI:MGI:4880794|PMID:21246657) RGD PMID:21246657 MGI:MGI:4880794 NCBI chr 7:96,438,046...96,464,049
Ensembl chr 7:96,438,046...96,464,049
JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 ISO
IBA
(PMID:24519609)
PMID:21873635
(MGI:MGI:5607401|PMID:20838829)
RGD PMID:20838829, PMID:24519609, PMID:21873635 MGI:MGI:5607401, RGD:13792537 NCBI chr 1:213,743,331...213,749,879
Ensembl chr 1:213,744,796...213,745,748
JBrowse link
G Ift80 intraflagellar transport 80 ISO MGI:MGI:3856827 (MGI:MGI:4940140|PMID:21227999) RGD PMID:21227999 MGI:MGI:4940140 NCBI chr 2:165,506,878...165,600,748
Ensembl chr 2:165,505,810...165,600,748
JBrowse link
G LOC102554748 nidogen-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:380,313...427,615
Ensembl chr 7:380,741...381,732
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO
IBA
(PMID:19673927), (PMID:20146170), (PMID:20630166)
PMID:21873635
RGD PMID:19673927, PMID:20146170, PMID:20630166, PMID:21873635 RGD:13792537 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO
IBA
MGI:MGI:1861309
PMID:21873635
RGD PMID:21873635 MGI:MGI:61254, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 ISO MGI:MGI:2180017 (MGI:MGI:2178869|PMID:11790802), (MGI:MGI:4829577|PMID:20530870) RGD PMID:11790802, PMID:20530870 MGI:MGI:2178869, MGI:MGI:4829577 NCBI chr 1:221,099,155...221,116,096
Ensembl chr 1:221,099,998...221,116,096
JBrowse link
G Ltf lactotransferrin ISO (PMID:15166119) RGD PMID:15166119 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO
ISS
(PMID:16167086)
GO_REF:0000024
RGD
UniProt
PMID:16167086 GO_REF:0000024 NCBI chr 8:5,522,739...5,533,018
Ensembl chr 8:5,522,739...5,533,018
JBrowse link
G Msx1 msh homeobox 1 ISO MGI:MGI:1933766|MGI:MGI:97169 (MGI:MGI:3608570|PMID:12489152), (MGI:MGI:3611627|PMID:16330189), (MGI:MGI:3723565|PMID:17693062) RGD PMID:12489152, PMID:16330189, PMID:17693062 MGI:MGI:3608570, MGI:MGI:3611627, MGI:MGI:3723565 NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
JBrowse link
G Msx2 msh homeobox 2 ISO MGI:MGI:97168 (MGI:MGI:3723565|PMID:17693062) RGD PMID:17693062 MGI:MGI:3723565 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO
ISS
(MGI:MGI:3818159|PMID:17547533)
GO_REF:0000024
RGD
UniProt
PMID:17547533 GO_REF:0000024, MGI:MGI:3818159 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G Pappa2 pappalysin 2 ISO MGI:MGI:5504500 (MGI:MGI:5502277|PMID:23457539) RGD PMID:23457539 MGI:MGI:5502277 NCBI chr13:76,389,150...76,660,248
Ensembl chr13:76,389,150...76,660,245
JBrowse link
G Pax1 paired box 1 ISO MGI:MGI:1856223|MGI:MGI:1856225 (MGI:MGI:69019|PMID:7607069) RGD PMID:7607069 MGI:MGI:69019 NCBI chr 3:141,577,124...141,589,849
Ensembl chr 3:141,577,504...141,589,849
JBrowse link
G Rarg retinoic acid receptor, gamma ISO MGI:MGI:1931079|MGI:MGI:88360 (MGI:MGI:2154839|PMID:11784046), (MGI:MGI:60925|PMID:8388780) RGD PMID:8388780, PMID:11784046 MGI:MGI:2154839, MGI:MGI:60925 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186
JBrowse link
G Ripply1 ripply transcriptional repressor 1 ISO MGI:MGI:2685968|MGI:MGI:4459309 (MGI:MGI:4459001|PMID:20346937) RGD PMID:20346937 MGI:MGI:4459001 NCBI chr  X:111,099,420...111,114,835
Ensembl chr  X:111,099,930...111,102,464
JBrowse link
G Ripply2 ripply transcriptional repressor 2 ISO MGI:MGI:3614797 (MGI:MGI:4459001|PMID:20346937) RGD PMID:20346937 MGI:MGI:4459001 NCBI chr 8:94,676,579...94,691,125
Ensembl chr 8:94,686,938...94,691,041
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:MGI:3810257 (MGI:MGI:3806414|PMID:18729207) RGD PMID:18729207 MGI:MGI:3806414 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Sfrp4 secreted frizzled-related protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5790095|PMID:27355534)
(PMID:27355534)
Ensembl
UniProt
RGD
PMID:27355534 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5790095 NCBI chr17:47,383,983...47,394,065
Ensembl chr17:47,297,489...47,394,328
JBrowse link
G Ski SKI proto-oncogene ISO MGI:MGI:2177555 (MGI:MGI:1095997|PMID:9284043) RGD PMID:9284043 MGI:MGI:1095997 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Sp5 Sp5 transcription factor ISO MGI:MGI:98472 (MGI:MGI:1927252|PMID:11071760) RGD PMID:11071760 MGI:MGI:1927252 NCBI chr 3:56,766,475...56,769,277
Ensembl chr 3:56,766,475...56,769,277
JBrowse link
G Tbxt T-box transcription factor T ISO MGI:MGI:1927715 (MGI:MGI:1927252|PMID:11071760) RGD PMID:11071760 MGI:MGI:1927252 NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO
ISS
(MGI:MGI:80519|PMID:8622766)
GO_REF:0000024
RGD
UniProt
PMID:8622766 GO_REF:0000024, MGI:MGI:80519 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
cartilage development involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase ISO MGI:MGI:1857139 (MGI:MGI:3656462|PMID:15622513) RGD PMID:15622513 MGI:MGI:3656462 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Col1a1 collagen type I alpha 1 chain ISO MGI:MGI:3769585 (MGI:MGI:3769669|PMID:18248096) RGD PMID:18248096 MGI:MGI:3769669 NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
JBrowse link
G Col2a1 collagen type II alpha 1 chain IEP
ISO
IEA
mandibular condylar cartilage
MGI:MGI:1857275|MGI:MGI:2152978 (MGI:MGI:3697977|PMID:11680679), (MGI:MGI:84914|PMID:8989518), (MGI:MGI:85592|PMID:9022054)
GO_REF:0000107
RGD
Ensembl
PMID:8989518, PMID:9022054, PMID:11680679, PMID:12924823 GO_REF:0000107, MGI:MGI:3697977, MGI:MGI:84914, MGI:MGI:85592, RGD:8661659 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:4946896|PMID:21185280) RGD PMID:21185280 MGI:MGI:4946896 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Ghr growth hormone receptor IEP RGD PMID:15749813 RGD:2307373 NCBI chr 2:53,149,225...53,413,954
Ensembl chr 2:53,150,370...53,413,638
JBrowse link
G Hoxa11 homeobox A11 ISO MGI:MGI:96203 (MGI:MGI:3043491|PMID:14668414) RGD PMID:14668414 MGI:MGI:3043491 NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503
Ensembl chr 4:82,298,152...82,300,503
JBrowse link
G Hoxd11 homeobox D11 ISO MGI:MGI:96172 (MGI:MGI:3043491|PMID:14668414) RGD PMID:14668414 MGI:MGI:3043491 NCBI chr 3:61,604,256...61,606,874
Ensembl chr 3:61,604,672...61,606,400
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 ISO MGI:MGI:1934891 (MGI:MGI:1930356|PMID:10545953) RGD PMID:10545953 MGI:MGI:1930356 NCBI chr 5:155,812,096...155,913,751 JBrowse link
G Shox2 short stature homeobox 2 ISO MGI:MGI:3628798 (MGI:MGI:3621617|PMID:16537395) RGD PMID:16537395 MGI:MGI:3621617 NCBI chr 2:164,118,175...164,126,783
Ensembl chr 2:164,118,191...164,126,783
JBrowse link
G Sik3 SIK family kinase 3 ISO MGI:MGI:5317918 (MGI:MGI:5316542|PMID:22318228) RGD PMID:22318228 MGI:MGI:5316542 NCBI chr 8:50,310,263...50,520,284
Ensembl chr 8:50,310,405...50,520,173
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 ISO (PMID:26249260) RGD PMID:26249260 NCBI chr12:47,698,915...47,737,902
Ensembl chr12:47,698,947...47,737,902
JBrowse link
chondrocyte development involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpinh1 serpin family H member 1 ISO
IEA
MGI:MGI:2176070|MGI:MGI:5505265 (MGI:MGI:5494537|PMID:22492985)
GO_REF:0000107
RGD
Ensembl
PMID:22492985 GO_REF:0000107, MGI:MGI:5494537 NCBI chr 1:164,301,010...164,308,306
Ensembl chr 1:164,301,010...164,308,317
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 ISO
IEA
MGI:MGI:1856877 (MGI:MGI:5293259|PMID:21788370)
GO_REF:0000107
RGD
Ensembl
PMID:21788370 GO_REF:0000107, MGI:MGI:5293259 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
chondrocyte differentiation involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 ISO
IEA
MGI:MGI:3579503 (MGI:MGI:4818263|PMID:19623616)
GO_REF:0000107
RGD
Ensembl
PMID:19623616 GO_REF:0000107, MGI:MGI:4818263 NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO (MGI:MGI:5698232|PMID:25639508) RGD PMID:25639508 MGI:MGI:5698232 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Scube2 signal peptide, CUB domain and EGF like domain containing 2 ISO MGI:MGI:5698367 (MGI:MGI:5698232|PMID:25639508) RGD PMID:25639508 MGI:MGI:5698232 NCBI chr 1:174,428,056...174,495,356
Ensembl chr 1:174,428,699...174,495,258
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO
ISS
(PMID:20676705)
GO_REF:0000024
RGD
UniProt
PMID:20676705 GO_REF:0000024 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Trip11 thyroid hormone receptor interactor 11 ISO MGI:MGI:4829605 (MGI:MGI:4822550|PMID:20089971) RGD PMID:20089971 MGI:MGI:4822550 NCBI chr 6:125,741,520...125,812,926
Ensembl chr 6:125,742,796...125,812,517
JBrowse link
coronal suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:3603464 (MGI:MGI:3848571|PMID:19389359) RGD PMID:19389359 MGI:MGI:3848571 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
cranial suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
IEA
(MGI:MGI:1203304|PMID:9477322)
GO_REF:0000107
RGD
Ensembl
PMID:9477322 GO_REF:0000107, MGI:MGI:1203304 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Fgf4 fibroblast growth factor 4 ISO (MGI:MGI:1203304|PMID:9477322) RGD PMID:9477322 MGI:MGI:1203304 NCBI chr 1:218,024,537...218,029,539
Ensembl chr 1:218,025,810...218,027,220
JBrowse link
G Igf1 insulin-like growth factor 1 IEP RGD PMID:10597685 RGD:12910129 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Insig1 insulin induced gene 1 ISO MGI:MGI:1920249 (MGI:MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:MGI:3689278 NCBI chr 4:342,302...350,515
Ensembl chr 4:342,302...350,515
JBrowse link
G Insig2 insulin induced gene 2 ISO MGI:MGI:1916289 (MGI:MGI:3689278|PMID:16955138) RGD PMID:16955138 MGI:MGI:3689278 NCBI chr13:37,264,818...37,292,718
Ensembl chr13:37,266,312...37,287,458
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO MGI:MGI:1857265|MGI:MGI:3038818 (MGI:MGI:2387743|PMID:12221714), (MGI:MGI:3042355|PMID:15030764), (MGI:MGI:3623529|PMID:16502419) RGD PMID:12221714, PMID:15030764, PMID:16502419 MGI:MGI:2387743, MGI:MGI:3042355, MGI:MGI:3623529 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
craniofacial suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn3 forkhead box N3 ISO (MGI:MGI:4835344|PMID:20691664) RGD PMID:20691664 MGI:MGI:4835344 NCBI chr 6:123,183,720...123,577,719
Ensembl chr 6:123,187,726...123,577,695
JBrowse link
G Frem1 Fras1 related extracellular matrix 1 ISO (PMID:21931569) RGD PMID:21931569 NCBI chr 5:101,018,009...101,166,794
Ensembl chr 5:101,020,448...101,166,651
JBrowse link
G Megf8 multiple EGF-like-domains 8 IEA
ISO
GO_REF:0000107
(PMID:23063620)
Ensembl
RGD
PMID:23063620 GO_REF:0000107 NCBI chr 1:82,184,671...82,234,045
Ensembl chr 1:82,185,034...82,234,045
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO MGI:MGI:1276107 (MGI:MGI:3771253|PMID:18022611) RGD PMID:18022611 MGI:MGI:3771253 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Mmp16 matrix metallopeptidase 16 ISO
IEA
MGI:MGI:2445723 (MGI:MGI:3771253|PMID:18022611)
GO_REF:0000107
RGD
Ensembl
PMID:18022611 GO_REF:0000107, MGI:MGI:3771253 NCBI chr 5:31,568,344...31,818,368
Ensembl chr 5:31,568,419...31,810,484
JBrowse link
G Neurog1 neurogenin 1 ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Rab23 RAB23, member RAS oncogene family ISO (PMID:17503333) RGD PMID:17503333 NCBI chr 9:38,469,784...38,496,185
Ensembl chr 9:38,470,298...38,495,176
JBrowse link
G Tifab TIFA inhibitor ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
JBrowse link
G Tmem107 transmembrane protein 107 ISO MGI:MGI:5007367 (MGI:MGI:6115041|PMID:28954202) RGD PMID:28954202 MGI:MGI:6115041 NCBI chr10:55,653,694...55,656,270
Ensembl chr10:55,653,946...55,656,270
JBrowse link
deltoid tuberosity development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4418577|PMID:20059955)
Ensembl
UniProt
RGD
PMID:20059955 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4418577 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO (PMID:18312615)
(MGI:MGI:3794216|PMID:18312615)
RGD PMID:18312615 MGI:MGI:3794216 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Scx scleraxis bHLH transcription factor ISO (MGI:MGI:3715390|PMID:17567668), (MGI:MGI:4418577|PMID:20059955) RGD PMID:17567668, PMID:20059955 MGI:MGI:3715390, MGI:MGI:4418577 NCBI chr 7:117,519,075...117,521,093
Ensembl chr 7:117,519,075...117,521,093
JBrowse link
endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr2 bone morphogenetic protein receptor type 2 ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 ISO MGI:MGI:2663959 (MGI:MGI:4365886|PMID:19725955) RGD PMID:19725955 MGI:MGI:4365886 NCBI chr 8:22,577,723...22,622,555
Ensembl chr 8:22,577,715...22,622,560
JBrowse link
G Dspp dentin sialophosphoprotein ISO MGI:MGI:2653208 (MGI:MGI:6187806|PMID:26972716) RGD PMID:26972716 MGI:MGI:6187806 NCBI chr14:6,926,972...6,933,079
Ensembl chr14:6,926,976...6,933,070
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO MGI:MGI:108050 (MGI:MGI:6199721|PMID:29545125), (MGI:MGI:6406739|PMID:21310272) RGD PMID:21310272, PMID:29545125 MGI:MGI:6199721, MGI:MGI:6406739 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Ext2 exostosin glycosyltransferase 2 ISO MGI:MGI:894663 (MGI:MGI:6406739|PMID:21310272) RGD PMID:21310272 MGI:MGI:6406739 NCBI chr 3:82,602,784...82,734,557
Ensembl chr 3:82,602,785...82,734,533
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:MGI:2158693 (MGI:MGI:2135696|PMID:11371614) RGD PMID:11371614 MGI:MGI:2135696 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
endochondral ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpl alkaline phosphatase, biomineralization associated ISO MGI:MGI:2183411 (MGI:MGI:5049900|PMID:20684022) RGD PMID:20684022 MGI:MGI:5049900 NCBI chr 5:156,086,496...156,141,513
Ensembl chr 5:156,086,497...156,141,537
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4418577|PMID:20059955)
Ensembl
UniProt
RGD
PMID:20059955 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4418577 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO MGI:MGI:2136985 (MGI:MGI:1270957|PMID:9664685) RGD PMID:9664685 MGI:MGI:1270957 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 ISO MGI:MGI:3806990 (MGI:MGI:3799383|PMID:18539921) RGD PMID:18539921 MGI:MGI:3799383 NCBI chr17:90,191,119...90,218,013
Ensembl chr17:90,188,043...90,218,013
Ensembl chr 5:90,188,043...90,218,013
JBrowse link
G Cbs cystathionine beta synthase ISO MGI:MGI:1857139 (MGI:MGI:3656462|PMID:15622513) RGD PMID:15622513 MGI:MGI:3656462 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Col10a1 collagen type X alpha 1 chain IMP RGD PMID:10853827 RGD:704421 NCBI chr20:41,180,295...41,190,664
Ensembl chr20:41,184,287...41,189,633
JBrowse link
G Col13a1 collagen type XIII alpha 1 chain ISO (PMID:11470398) RGD PMID:11470398 NCBI chr20:31,456,502...31,598,360
Ensembl chr20:31,456,852...31,598,118
JBrowse link
G Col1a1 collagen type I alpha 1 chain ISO MGI:MGI:1856671 (MGI:MGI:64698|PMID:8130375) RGD PMID:8130375 MGI:MGI:64698 NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO
IEA
(MGI:MGI:1334159|PMID:10100048)
GO_REF:0000107
RGD
Ensembl
PMID:10100048 GO_REF:0000107, MGI:MGI:1334159 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO MGI:MGI:4947395 (MGI:MGI:4946456|PMID:21148564) RGD PMID:21148564 MGI:MGI:4946456 NCBI chr16:22,704,318...23,075,071
Ensembl chr16:22,979,444...23,074,798
JBrowse link
G Dlx5 distal-less homeobox 5 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4413604|PMID:19956613)
Ensembl
UniProt
RGD
PMID:19956613 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4413604 NCBI chr 4:32,387,741...32,392,085
Ensembl chr 4:32,387,741...32,392,007
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:4946896|PMID:21185280) RGD PMID:21185280 MGI:MGI:4946896 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Fgf18 fibroblast growth factor 18 ISO
IEA
MGI:MGI:2178751 (MGI:MGI:3703411|PMID:17014841)
GO_REF:0000107
RGD
Ensembl
PMID:17014841 GO_REF:0000107, MGI:MGI:3703411 NCBI chr10:18,047,109...18,082,290
Ensembl chr10:18,047,109...18,063,391
JBrowse link
G Foxc1 forkhead box C1 ISO (MGI:MGI:5641778|PMID:25808752) RGD PMID:25808752 MGI:MGI:5641778 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Gnas GNAS complex locus ISO MGI:MGI:3043361 (MGI:MGI:3619837|PMID:15797856) RGD PMID:15797856 MGI:MGI:3619837 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 ISO MGI:MGI:1934892 (MGI:MGI:1349497|PMID:10579729) RGD PMID:10579729 MGI:MGI:1349497 NCBI chr 5:155,812,096...155,913,751 JBrowse link
G Ift80 intraflagellar transport 80 ISO MGI:MGI:3665440|MGI:MGI:5818514 (MGI:MGI:5817320|PMID:26098911) RGD PMID:26098911 MGI:MGI:5817320 NCBI chr 2:165,506,878...165,600,748
Ensembl chr 2:165,505,810...165,600,748
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:23273569)
Ensembl
UniProt
RGD
PMID:23273569 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:166,898,177...166,912,524
Ensembl chr 1:166,899,894...166,912,524
JBrowse link
G Mef2c myocyte enhancer factor 2C ISO
IEA
MGI:MGI:99533 (MGI:MGI:3701381|PMID:17336904)
GO_REF:0000107
RGD
Ensembl
PMID:17336904 GO_REF:0000107, MGI:MGI:3701381 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mef2d myocyte enhancer factor 2D ISO
IEA
MGI:MGI:99458 (MGI:MGI:3701381|PMID:17336904)
GO_REF:0000107
RGD
Ensembl
PMID:17336904 GO_REF:0000107, MGI:MGI:3701381 NCBI chr 2:187,511,775...187,541,285
Ensembl chr 2:187,512,164...187,538,026
JBrowse link
G Mmp13 matrix metallopeptidase 13 IEP
ISO
IEA
(MGI:MGI:3771509|PMID:17987127)
GO_REF:0000107
RGD
Ensembl
PMID:17987127, PMID:10646117 GO_REF:0000107, MGI:MGI:3771509, RGD:10043159 NCBI chr 8:5,522,739...5,533,018
Ensembl chr 8:5,522,739...5,533,018
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO MGI:MGI:1276107 (MGI:MGI:3771253|PMID:18022611) RGD PMID:18022611 MGI:MGI:3771253 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Mmp16 matrix metallopeptidase 16 ISO
IEA
MGI:MGI:2445723 (MGI:MGI:3771253|PMID:18022611)
GO_REF:0000107
RGD
Ensembl
PMID:18022611 GO_REF:0000107, MGI:MGI:3771253 NCBI chr 5:31,568,344...31,818,368
Ensembl chr 5:31,568,419...31,810,484
JBrowse link
G Nab1 Ngfi-A binding protein 1 ISO MGI:MGI:107563 (MGI:MGI:3583879|PMID:16136673) RGD PMID:16136673 MGI:MGI:3583879 NCBI chr 9:53,906,073...53,945,474
Ensembl chr 9:53,906,073...53,945,473
JBrowse link
G Nab2 Ngfi-A binding protein 2 ISO MGI:MGI:107564 (MGI:MGI:3583879|PMID:16136673) RGD PMID:16136673 MGI:MGI:3583879 NCBI chr 7:70,963,580...70,971,471
Ensembl chr 7:70,961,575...70,969,905
JBrowse link
G Pex7 peroxisomal biogenesis factor 7 ISO MGI:MGI:3052739 (MGI:MGI:3052413|PMID:12915479) RGD PMID:12915479 MGI:MGI:3052413 NCBI chr 1:15,311,768...15,374,702
Ensembl chr 1:15,311,770...15,374,850
JBrowse link
G Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 ISO MGI:MGI:5049904 (MGI:MGI:5049900|PMID:20684022) RGD PMID:20684022 MGI:MGI:5049900 NCBI chr10:83,635,557...83,643,862
Ensembl chr10:83,636,518...83,643,859
JBrowse link
G Pthlh parathyroid hormone-like hormone ISO MGI:MGI:2154515 (MGI:MGI:1352921|PMID:8895385) RGD PMID:8895385 MGI:MGI:1352921 NCBI chr 4:181,663,425...181,674,181 JBrowse link
G Runx2 RUNX family transcription factor 2 ISO
IEA
MGI:MGI:2176466 (MGI:MGI:1332911|PMID:10072783)
GO_REF:0000107
RGD
Ensembl
PMID:10072783 GO_REF:0000107, MGI:MGI:1332911 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Scx scleraxis bHLH transcription factor ISO (MGI:MGI:4418577|PMID:20059955) RGD PMID:20059955 MGI:MGI:4418577 NCBI chr 7:117,519,075...117,521,093
Ensembl chr 7:117,519,075...117,521,093
JBrowse link
G Sik3 SIK family kinase 3 ISO MGI:MGI:5317918 (MGI:MGI:5316542|PMID:22318228) RGD PMID:22318228 MGI:MGI:5316542 NCBI chr 8:50,310,263...50,520,284
Ensembl chr 8:50,310,405...50,520,173
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 IEA
ISO
GO_REF:0000107
MGI:MGI:1856877|MGI:MGI:3575405 (MGI:MGI:3715574|PMID:17591962), (MGI:MGI:5293259|PMID:21788370), (MGI:MGI:5582670|PMID:24505141)
Ensembl
RGD
PMID:17591962, PMID:21788370, PMID:24505141 GO_REF:0000107, MGI:MGI:3715574, MGI:MGI:5293259, MGI:MGI:5582670 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
G Tek TEK receptor tyrosine kinase IEP RGD PMID:11735002 RGD:1601509 NCBI chr 5:113,725,717...113,852,799
Ensembl chr 5:113,725,717...113,852,799
JBrowse link
G Tmem119 transmembrane protein 119 ISO (MGI:MGI:5543589|PMID:22416756) RGD PMID:22416756 MGI:MGI:5543589 NCBI chr12:48,598,498...48,605,704
Ensembl chr12:48,598,647...48,605,704
JBrowse link
frontal suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:1856276 (MGI:MGI:4821204|PMID:20570969) RGD PMID:20570969 MGI:MGI:4821204 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Msx2 msh homeobox 2 ISO
IEA
MGI:MGI:1926381 (MGI:MGI:1355063|PMID:10742104)
GO_REF:0000107
RGD
Ensembl
PMID:10742104 GO_REF:0000107, MGI:MGI:1355063 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:12416537 RGD:2302805 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfb2 transforming growth factor, beta 2 IEP RGD PMID:12416537 RGD:2302805 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgfb3 transforming growth factor, beta 3 IEP RGD PMID:12416537 RGD:2302805 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
growth plate cartilage axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stc1 stanniocalcin 1 ISO (PMID:16377640) RGD PMID:16377640 NCBI chr15:50,891,137...50,901,791
Ensembl chr15:50,891,127...50,903,162
JBrowse link
growth plate cartilage chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col27a1 collagen type XXVII alpha 1 chain ISO MGI:MGI:5315593 (MGI:MGI:5315238|PMID:22206015) RGD PMID:22206015 MGI:MGI:5315238 NCBI chr 5:79,054,004...79,172,442
Ensembl chr 5:79,055,521...79,170,765
JBrowse link
G Poc1a POC1 centriolar protein A ISO MGI:MGI:2135614 (MGI:MGI:5700251|PMID:26496357) RGD PMID:26496357 MGI:MGI:5700251 NCBI chr 8:114,982,764...115,050,844
Ensembl chr 8:114,986,326...115,050,728
JBrowse link
growth plate cartilage chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa6 annexin A6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:40,320,581...40,375,605
Ensembl chr10:40,320,581...40,375,605
JBrowse link
G Ift80 intraflagellar transport 80 ISO MGI:MGI:3665440|MGI:MGI:5818514 (MGI:MGI:5817320|PMID:26098911) RGD PMID:26098911 MGI:MGI:5817320 NCBI chr 2:165,506,878...165,600,748
Ensembl chr 2:165,505,810...165,600,748
JBrowse link
G Nppc natriuretic peptide C ISO
ISS
(MGI:MGI:2177134|PMID:11259675)
GO_REF:0000024
RGD
UniProt
PMID:11259675 GO_REF:0000024, MGI:MGI:2177134 NCBI chr 9:93,731,436...93,735,636
Ensembl chr 9:93,731,436...93,735,636
JBrowse link
growth plate cartilage chondrocyte growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rarg retinoic acid receptor, gamma ISO (MGI:MGI:3848572|PMID:19389355) RGD PMID:19389355 MGI:MGI:3848572 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186
JBrowse link
G Sox9 SRY-box transcription factor 9 ISS
ISO
GO_REF:0000024
(MGI:MGI:5317468|PMID:22421045)
UniProt
RGD
PMID:22421045 GO_REF:0000024, MGI:MGI:5317468 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 ISO MGI:MGI:2384513 (MGI:MGI:4949016|PMID:21420963) RGD PMID:21420963 MGI:MGI:4949016 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
growth plate cartilage chondrocyte morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Matn1 matrilin 1 ISO MGI:MGI:2153042|MGI:MGI:3663272 (MGI:MGI:3655339|PMID:16877353) RGD PMID:16877353 MGI:MGI:3655339 NCBI chr 5:149,077,412...149,086,957
Ensembl chr 5:149,077,412...149,086,957
JBrowse link
growth plate cartilage chondrocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cer1 cerberus 1, DAN family BMP antagonist ISO (PMID:19113921) RGD PMID:19113921 NCBI chr 5:101,003,019...101,006,375
Ensembl chr 5:101,003,023...101,006,375
JBrowse link
G Nppc natriuretic peptide C ISO
ISS
(MGI:MGI:2177134|PMID:11259675)
GO_REF:0000024
RGD
UniProt
PMID:11259675 GO_REF:0000024, MGI:MGI:2177134 NCBI chr 9:93,731,436...93,735,636
Ensembl chr 9:93,731,436...93,735,636
JBrowse link
growth plate cartilage development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen type II alpha 1 chain IEP spheno-occipital synchondrosis RGD PMID:20591638 RGD:8661256 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Col9a1 collagen type IX alpha 1 chain ISO MGI:MGI:2152964|MGI:MGI:88469|MGI:MGI:98737|MGI:MGI:98739 (MGI:MGI:3795666|PMID:18467703), (MGI:MGI:3807836|PMID:18191556) RGD PMID:18191556, PMID:18467703 MGI:MGI:3795666, MGI:MGI:3807836 NCBI chr 9:30,419,001...30,502,307
Ensembl chr 9:30,419,001...30,502,298
JBrowse link
G Comp cartilage oligomeric matrix protein IEA
ISO
GO_REF:0000107
MGI:MGI:2180787|MGI:MGI:3758741|MGI:MGI:88465|MGI:MGI:98737|MGI:MGI:98739 (MGI:MGI:3723532|PMID:17588960), (MGI:MGI:3795666|PMID:18467703), (MGI:MGI:3807836|PMID:18191556)
Ensembl
RGD
PMID:17588960, PMID:18191556, PMID:18467703 GO_REF:0000107, MGI:MGI:3723532, MGI:MGI:3795666, MGI:MGI:3807836 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Ift80 intraflagellar transport 80 ISO MGI:MGI:3665440|MGI:MGI:5818514 (MGI:MGI:5817320|PMID:26098911) RGD PMID:26098911 MGI:MGI:5817320 NCBI chr 2:165,506,878...165,600,748
Ensembl chr 2:165,505,810...165,600,748
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO
IEA
MGI:MGI:98729 (MGI:MGI:4949554|PMID:21444811)
GO_REF:0000107
RGD
Ensembl
PMID:21444811 GO_REF:0000107, MGI:MGI:4949554 NCBI chr 8:5,522,739...5,533,018
Ensembl chr 8:5,522,739...5,533,018
JBrowse link
G Rara retinoic acid receptor, alpha ISO MGI:MGI:97858 (MGI:MGI:3848572|PMID:19389355) RGD PMID:19389355 MGI:MGI:3848572 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G Rarb retinoic acid receptor, beta ISO MGI:MGI:97858 (MGI:MGI:3848572|PMID:19389355) RGD PMID:19389355 MGI:MGI:3848572 NCBI chr15:9,915,223...10,262,599
Ensembl chr15:10,120,206...10,262,599
JBrowse link
G Rarg retinoic acid receptor, gamma ISO MGI:MGI:97856|MGI:MGI:97857 (MGI:MGI:3848572|PMID:19389355) RGD PMID:19389355 MGI:MGI:3848572 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 ISO MGI:MGI:1340026 (MGI:MGI:4949016|PMID:21420963) RGD PMID:21420963 MGI:MGI:4949016 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
G Thbs1 thrombospondin 1 ISO MGI:MGI:2154534|MGI:MGI:88465|MGI:MGI:88469|MGI:MGI:98739 (MGI:MGI:3795666|PMID:18467703) RGD PMID:18467703 MGI:MGI:3795666 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
G Thbs3 thrombospondin 3 ISO MGI:MGI:3581964|MGI:MGI:88465|MGI:MGI:88469|MGI:MGI:98737 (MGI:MGI:3795666|PMID:18467703) RGD PMID:18467703 MGI:MGI:3795666 NCBI chr 2:188,528,979...188,540,738
Ensembl chr 2:188,528,979...188,540,736
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:MGI:2180033 (MGI:MGI:2178865|PMID:11923874) RGD PMID:11923874 MGI:MGI:2178865 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
lambdoid suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:1856276 (MGI:MGI:4821204|PMID:20570969) RGD PMID:20570969 MGI:MGI:4821204 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
megakaryocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi1 abl-interactor 1 ISO
IEA
(MGI:MGI:3847627|PMID:17664349)
GO_REF:0000107
RGD
Ensembl
PMID:17664349 GO_REF:0000107, MGI:MGI:3847627 NCBI chr17:89,951,662...90,033,334
Ensembl chr17:89,951,752...90,033,328
JBrowse link
G Ep300 E1A binding protein p300 ISO MGI:MGI:3813243 (MGI:MGI:3812266|PMID:18684867) RGD PMID:18684867 MGI:MGI:3812266 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Fli1 Fli-1 proto-oncogene, ETS transcription factor ISO MGI:MGI:2386167 (MGI:MGI:3808108|PMID:16757682) RGD PMID:16757682 MGI:MGI:3808108 NCBI chr 8:33,541,932...33,661,111
Ensembl chr 8:33,543,258...33,661,049
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase ISO (MGI:MGI:3040777|PMID:15067126) RGD PMID:15067126 MGI:MGI:3040777 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Med1 mediator complex subunit 1 ISO
ISS
(MGI:MGI:2158098|PMID:11724781)
GO_REF:0000024
RGD
UniProt
PMID:11724781 GO_REF:0000024, MGI:MGI:2158098 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Meis1 Meis homeobox 1 ISO MGI:MGI:3578637 (MGI:MGI:4948219|PMID:20203303) RGD PMID:20203303 MGI:MGI:4948219 NCBI chr14:103,182,178...103,321,809
Ensembl chr14:103,181,281...103,321,270
JBrowse link
G Mpig6b megakaryocyte and platelet inhibitory receptor G6b ISO
IBA
ISS
IEA
MGI:MGI:2675830 (MGI:MGI:5512895|PMID:23112346)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:23112346, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5512895, RGD:13792537 NCBI chr20:5,054,419...5,056,655
Ensembl chr20:5,054,583...5,056,488
JBrowse link
G Nbeal2 neurobeachin-like 2 ISO MGI:MGI:4461705|MGI:MGI:5007262 (MGI:MGI:5528579|PMID:23861251), (MGI:MGI:5636146|PMID:25258341) RGD PMID:23861251, PMID:25258341 MGI:MGI:5528579, MGI:MGI:5636146 NCBI chr 8:118,893,987...118,924,390
Ensembl chr 8:118,893,995...118,926,613
JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha ISO (MGI:MGI:3776733|PMID:16434494) RGD PMID:16434494 MGI:MGI:3776733 NCBI chr17:85,533,056...85,748,843 JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 ISO MGI:MGI:3690333 (MGI:MGI:5494903|PMID:23509158) RGD PMID:23509158 MGI:MGI:5494903 NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
JBrowse link
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 ISO
IEA
MGI:MGI:3719625 (MGI:MGI:5494903|PMID:23509158)
GO_REF:0000107
RGD
Ensembl
PMID:23509158 GO_REF:0000107, MGI:MGI:5494903 NCBI chr 4:157,239,141...157,263,890
Ensembl chr 4:157,239,142...157,263,890
JBrowse link
G Sh2b3 SH2B adaptor protein 3 ISO
IEA
(MGI:MGI:3510267|PMID:15337790)
GO_REF:0000107
RGD
Ensembl
PMID:15337790 GO_REF:0000107, MGI:MGI:3510267 NCBI chr12:40,261,990...40,265,757
Ensembl chr12:40,244,081...40,265,757
JBrowse link
G Srf serum response factor ISO MGI:MGI:2176073|MGI:MGI:3046779|MGI:MGI:3522206|MGI:MGI:3764698 (MGI:MGI:4834086|PMID:20525922), (MGI:MGI:4848276|PMID:20709909) RGD PMID:20525922, PMID:20709909 MGI:MGI:4834086, MGI:MGI:4848276 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor ISO MGI:MGI:1858004|MGI:MGI:2450743 (MGI:MGI:3808106|PMID:16763211) RGD PMID:16763211 MGI:MGI:3808106 NCBI chr 5:133,864,401...133,878,604
Ensembl chr 5:133,864,798...133,878,830
JBrowse link
G Tesc tescalcin NOT ISO (MGI:MGI:5315196|PMID:22285131) RGD PMID:22285131 MGI:MGI:5315196 NCBI chr12:44,141,258...44,174,701
Ensembl chr12:44,141,422...44,174,583
JBrowse link
G Thpo thrombopoietin ISO (PMID:15337790) RGD PMID:15337790 NCBI chr11:82,845,676...82,853,439
Ensembl chr11:83,868,655...83,873,910
Ensembl chr11:83,868,655...83,873,910
JBrowse link
G Vps33b VPS33B, late endosome and lysosome associated ISO (MGI:MGI:5645581|PMID:25947942) RGD PMID:25947942 MGI:MGI:5645581 NCBI chr 1:142,060,955...142,083,955
Ensembl chr 1:142,060,955...142,083,953
JBrowse link
G Wasf2 WASP family member 2 ISO (MGI:MGI:3847627|PMID:17664349) RGD PMID:17664349 MGI:MGI:3847627 NCBI chr 5:151,319,382...151,385,051
Ensembl chr 5:151,343,493...151,381,238
JBrowse link
G Zfp385a zinc finger protein 385A ISO MGI:MGI:3510440 (MGI:MGI:3505817|PMID:11927637) RGD PMID:11927637 MGI:MGI:3505817 NCBI chr 7:144,939,616...144,966,364
Ensembl chr 7:144,939,619...144,966,370
JBrowse link
G Zfpm1 zinc finger protein, multitype 1 ISO MGI:MGI:2176182|MGI:MGI:4421436 (MGI:MGI:4420713|PMID:20010697) RGD PMID:20010697 MGI:MGI:4420713 NCBI chr19:55,094,585...55,150,994
Ensembl chr19:55,094,585...55,150,686
JBrowse link
mesenchymal cell differentiation involved in bone development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:4834113|PMID:20404326) RGD PMID:20404326 MGI:MGI:4834113 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Ranbp3l RAN binding protein 3-like ISO (MGI:MGI:5883200|PMID:25755279) RGD PMID:25755279 MGI:MGI:5883200 NCBI chr 2:58,221,773...58,458,072
Ensembl chr 2:58,448,917...58,458,517
JBrowse link
negative regulation of bone development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein ISO MGI:MGI:2653208 (MGI:MGI:6187806|PMID:26972716) RGD PMID:26972716 MGI:MGI:6187806 NCBI chr14:6,926,972...6,933,079
Ensembl chr14:6,926,976...6,933,070
JBrowse link
G Rgn regucalcin IDA
IMP
RGD PMID:12239582, PMID:11129957 RGD:9681003, RGD:9590179 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904
JBrowse link
negative regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grem1 gremlin 1, DAN family BMP antagonist ISO (PMID:15539560) RGD PMID:15539560 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Pth parathyroid hormone IMP PMID:11604398 CAFA PMID:11604398 RGD:12793028 NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
JBrowse link
G Rflna refilin A ISO
IBA
MGI:MGI:1923816 (MGI:MGI:5570967|PMID:24436304)
PMID:21873635
RGD PMID:24436304, PMID:21873635 MGI:MGI:5570967, RGD:13792537 NCBI chr12:37,038,732...37,047,628
Ensembl chr12:37,038,733...37,047,628
JBrowse link
G Rflnb refilin B ISO
IBA
MGI:MGI:1920371 (MGI:MGI:5570967|PMID:24436304)
PMID:21873635
RGD PMID:24436304, PMID:21873635 MGI:MGI:5570967, RGD:13792537 NCBI chr10:64,196,103...64,202,380
Ensembl chr10:64,196,127...64,202,380
JBrowse link
negative regulation of growth plate cartilage chondrocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein ISO MGI:MGI:2653208 (MGI:MGI:6187806|PMID:26972716) RGD PMID:26972716 MGI:MGI:6187806 NCBI chr14:6,926,972...6,933,079
Ensembl chr14:6,926,976...6,933,070
JBrowse link
negative regulation of osteoclast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn18 claudin 18 ISO MGI:MGI:5007067 (MGI:MGI:5489769|PMID:22437732) RGD PMID:22437732 MGI:MGI:5489769 NCBI chr 8:107,933,725...107,960,656
Ensembl chr 8:107,934,860...107,952,530
JBrowse link
G Fbn1 fibrillin 1 ISO (PMID:24039232)
(MGI:MGI:5795811|PMID:24039232)
RGD PMID:24039232 MGI:MGI:5795811 NCBI chr 3:117,569,708...117,766,160
Ensembl chr 3:117,569,697...117,766,120
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO (PMID:29149593)
(MGI:MGI:6106664|PMID:29149593)
RGD PMID:29149593 MGI:MGI:6106664 NCBI chr 2:184,230,191...184,309,805
Ensembl chr 2:184,231,260...184,309,664
JBrowse link
G Tjp2 tight junction protein 2 ISO (MGI:MGI:5489769|PMID:22437732) RGD PMID:22437732 MGI:MGI:5489769 NCBI chr 1:241,945,816...242,084,044
Ensembl chr 1:241,945,841...242,083,484
JBrowse link
ossification involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dchs1 dachsous cadherin-related 1 ISO MGI:MGI:4867020 (MGI:MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:MGI:4939936 NCBI chr 1:170,594,981...170,629,062
Ensembl chr 1:170,594,822...170,628,915
JBrowse link
G Fat4 FAT atypical cadherin 4 ISO MGI:MGI:3846573 (MGI:MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:MGI:4939936 NCBI chr 2:125,751,818...125,879,398
Ensembl chr 2:125,752,130...125,879,387
JBrowse link
G Plxnb1 plexin B1 ISO (MGI:MGI:5297297|PMID:22019888) RGD PMID:22019888 MGI:MGI:5297297 NCBI chr 8:117,832,826...117,858,515
Ensembl chr 8:117,836,701...117,856,689
JBrowse link
G Rhoa ras homolog family member A ISO (MGI:MGI:5297297|PMID:22019888) RGD PMID:22019888 MGI:MGI:5297297 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Ryr1 ryanodine receptor 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3764002|PMID:18003898)
Ensembl
UniProt
RGD
PMID:18003898 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3764002 NCBI chr 1:87,959,596...88,066,252
Ensembl chr 1:87,959,712...88,066,101
JBrowse link
G Sema4d semaphorin 4D ISO
IBA
(PMID:22019888)
PMID:21873635
(MGI:MGI:5297297|PMID:22019888)
RGD PMID:22019888, PMID:21873635 MGI:MGI:5297297, RGD:13792537 NCBI chr17:13,516,276...13,538,513
Ensembl chr17:13,488,376...13,553,974
JBrowse link
G Thbs3 thrombospondin 3 ISO MGI:MGI:3581964 (MGI:MGI:3581317|PMID:15964815) RGD PMID:15964815 MGI:MGI:3581317 NCBI chr 2:188,528,979...188,540,738
Ensembl chr 2:188,528,979...188,540,736
JBrowse link
G Xylt1 xylosyltransferase 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:5544658|PMID:24161523)
UniProt
RGD
PMID:24161523 GO_REF:0000024, MGI:MGI:5544658 NCBI chr 1:186,939,698...187,264,758
Ensembl chr 1:187,149,453...187,261,632
JBrowse link
osteoclast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:7961821) RGD PMID:7961821 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Foxp1 forkhead box P1 ISO (PMID:18799727) RGD PMID:18799727 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G Lrrk1 leucine-rich repeat kinase 1 ISO MGI:MGI:5568128|MGI:MGI:98397 (MGI:MGI:5564766|PMID:23526378) RGD PMID:23526378 MGI:MGI:5564766 NCBI chr 1:127,166,866...127,301,053
Ensembl chr 1:127,166,431...127,292,090
JBrowse link
G Mir34a microRNA 34a ISO (MGI:MGI:5613071|PMID:25043055) RGD PMID:25043055 MGI:MGI:5613071 NCBI chr 5:167,092,491...167,092,592
Ensembl chr 5:167,092,491...167,092,592
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 ISO (MGI:MGI:5308511|PMID:22073305) RGD PMID:22073305 MGI:MGI:5308511 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO
IBA
MGI:MGI:2142227 (MGI:MGI:5564766|PMID:23526378)
PMID:21873635
RGD PMID:23526378, PMID:21873635 MGI:MGI:5564766, RGD:13792537 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Tnfsf11 TNF superfamily member 11 ISO (MGI:MGI:5297759|PMID:21841309) RGD PMID:21841309 MGI:MGI:5297759 NCBI chr15:60,482,527...60,512,704
Ensembl chr15:60,482,527...60,512,704
JBrowse link
osteoclast maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam20c FAM20C, golgi associated secretory pathway kinase ISO MGI:MGI:2656539|MGI:MGI:5428020 (MGI:MGI:5427766|PMID:22615579) RGD PMID:22615579 MGI:MGI:5427766 NCBI chr12:17,913,771...17,972,733
Ensembl chr12:17,913,767...17,972,737
JBrowse link
perichondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:6407539|PMID:28768899) RGD PMID:28768899 MGI:MGI:6407539 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
positive regulation of bone development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:12960077 RGD:12905040 NCBI chr 4:145,674,157...145,678,066
Ensembl chr 4:145,674,157...145,678,066
JBrowse link
G Tmem119 transmembrane protein 119 ISO (MGI:MGI:5700277|PMID:26207632) RGD PMID:26207632 MGI:MGI:5700277 NCBI chr12:48,598,498...48,605,704
Ensembl chr12:48,598,647...48,605,704
JBrowse link
positive regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:MGI:5291888|PMID:21784188) RGD PMID:21784188 MGI:MGI:5291888 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Asxl2 ASXL transcriptional regulator 2 ISO MGI:MGI:3840841 (MGI:MGI:5514358|PMID:21490954) RGD PMID:21490954 MGI:MGI:5514358 NCBI chr 6:27,835,346...27,919,285
Ensembl chr 6:27,887,797...27,915,563
JBrowse link
positive regulation of osteoclast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap1 ATPase H+ transporting accessory protein 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5575464|PMID:22467241)
Ensembl
UniProt
RGD
PMID:22467241 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5575464 NCBI chr  X:156,407,973...156,415,053
Ensembl chr  X:156,407,937...156,415,145
JBrowse link
G Gpr68 G protein-coupled receptor 68 ISO MGI:MGI:3849457 (MGI:MGI:3848292|PMID:19479052) RGD PMID:19479052 MGI:MGI:3848292 NCBI chr 6:124,874,151...124,903,949
Ensembl chr 6:124,874,151...124,876,710
JBrowse link
G Slc9b2 solute carrier family 9 member B2 ISO (MGI:MGI:3785147|PMID:18269914) RGD PMID:18269914 MGI:MGI:3785147 NCBI chr 2:240,485,254...240,519,166
Ensembl chr 2:240,495,371...240,519,141
JBrowse link
G Tnfsf11 TNF superfamily member 11 ISO (MGI:MGI:3785147|PMID:18269914), (MGI:MGI:5489769|PMID:22437732), (MGI:MGI:5522615|PMID:23980096) RGD PMID:18269914, PMID:22437732, PMID:23980096 MGI:MGI:3785147, MGI:MGI:5489769, MGI:MGI:5522615 NCBI chr15:60,482,527...60,512,704
Ensembl chr15:60,482,527...60,512,704
JBrowse link
G Tyrobp transmembrane immune signaling adaptor Tyrobp ISO (MGI:MGI:3653295|PMID:14969392) RGD PMID:14969392 MGI:MGI:3653295 NCBI chr 1:88,875,370...88,879,305
Ensembl chr 1:88,875,375...88,879,303
JBrowse link
regulation of bone development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:3798847 (MGI:MGI:5439039|PMID:22841643) RGD PMID:22841643 MGI:MGI:5439039 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Kat2a lysine acetyltransferase 2A ISO (MGI:MGI:6377983|PMID:30424580) RGD PMID:30424580 MGI:MGI:6377983 NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537
JBrowse link
G Kdr kinase insert domain receptor ISO MGI:MGI:4422101 (MGI:MGI:5461755|PMID:22886301) RGD PMID:22886301 MGI:MGI:5461755 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Lox lysyl oxidase ISO MGI:MGI:2657016 (MGI:MGI:5293278|PMID:21665949) RGD PMID:21665949 MGI:MGI:5293278 NCBI chr18:47,500,320...47,577,819
Ensembl chr18:47,500,330...47,577,819
JBrowse link
regulation of growth plate cartilage chondrocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carm1 coactivator-associated arginine methyltransferase 1 ISO MGI:MGI:2663959 (MGI:MGI:4365886|PMID:19725955) RGD PMID:19725955 MGI:MGI:4365886 NCBI chr 8:22,577,723...22,622,555
Ensembl chr 8:22,577,715...22,622,560
JBrowse link
G Por cytochrome p450 oxidoreductase IMP positive regulation RGD PMID:19264869 RGD:2316785 NCBI chr12:23,998,411...24,017,063
Ensembl chr12:23,998,411...24,046,814
JBrowse link
regulation of osteoclast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch2 notch receptor 2 ISS
ISO
IEA
GO_REF:0000024
(PMID:29149593)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29149593 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Siglec15 sialic acid binding Ig-like lectin 15 ISO
IBA
MGI:MGI:1277211 (MGI:MGI:5467208|PMID:22451653)
PMID:21873635
RGD PMID:22451653, PMID:21873635 MGI:MGI:5467208, RGD:13792537 NCBI chr18:74,403,384...74,417,333
Ensembl chr18:74,403,384...74,417,333
JBrowse link
G Tyrobp transmembrane immune signaling adaptor Tyrobp ISO MGI:MGI:3646642 (MGI:MGI:5467208|PMID:22451653) RGD PMID:22451653 MGI:MGI:5467208 NCBI chr 1:88,875,370...88,879,305
Ensembl chr 1:88,875,375...88,879,303
JBrowse link
sagittal suture morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:1856276 (MGI:MGI:4821204|PMID:20570969) RGD PMID:20570969 MGI:MGI:4821204 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    developmental process 6827
      anatomical structure development 6269
        animal organ development 4035
          bone development 246
            baculum development 1
            bone cell development + 38
            bone marrow development 12
            bone maturation + 25
            bone morphogenesis + 114
            deltoid tuberosity development 3
            mesenchymal cell differentiation involved in bone development 2
            negative regulation of bone development 2
            positive regulation of bone development 2
            regulation of bone development + 8
Path 2
Term Annotations click to browse term
  biological_process 20027
    developmental process 6827
      anatomical structure development 6269
        multicellular organism development 5744
          system development 5280
            animal organ development 4035
              bone development 246
                baculum development 1
                bone cell development + 38
                bone marrow development 12
                bone maturation + 25
                bone morphogenesis + 114
                deltoid tuberosity development 3
                mesenchymal cell differentiation involved in bone development 2
                negative regulation of bone development 2
                positive regulation of bone development 2
                regulation of bone development + 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.