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ONTOLOGY REPORT - ANNOTATIONS


Term:branching involved in salivary gland morphogenesis
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Accession:GO:0060445 term browser browse the term
Definition:The process in which the branching structure of the salivary gland is generated and organized.


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branching involved in salivary gland morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 ISO MGI:MGI:1857654 (MGI:MGI:2158598|PMID:11731698) RGD PMID:11731698 MGI:MGI:2158598 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Dag1 dystroglycan 1 ISO (MGI:MGI:2156962|PMID:11798066) RGD PMID:11798066 MGI:MGI:2156962 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 ISO MGI:MGI:1924661 (MGI:MGI:5699497|PMID:26371508) RGD PMID:26371508 MGI:MGI:5699497 NCBI chr 5:24,576,988...24,631,758
Ensembl chr 5:24,576,991...24,631,698
JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 ISO
IEA
MGI:MGI:1917326 (MGI:MGI:5699497|PMID:26371508)
GO_REF:0000107
RGD
Ensembl
PMID:26371508 GO_REF:0000107, MGI:MGI:5699497 NCBI chr19:38,113,412...38,120,578
Ensembl chr19:38,113,412...38,120,578
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:95523 (MGI:MGI:3703378|PMID:15972105), (MGI:MGI:3813176|PMID:18559345) RGD PMID:15972105, PMID:18559345 MGI:MGI:3703378, MGI:MGI:3813176 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf7 fibroblast growth factor 7 ISO
IEA
(MGI:MGI:3813176|PMID:18559345)
GO_REF:0000107
RGD
Ensembl
PMID:18559345 GO_REF:0000107, MGI:MGI:3813176 NCBI chr 3:118,315,859...118,368,464
Ensembl chr 3:118,317,761...118,366,872
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:MGI:2686826|MGI:MGI:98297 (MGI:MGI:3039063|PMID:15042696), (MGI:MGI:3051949|PMID:15063181) RGD PMID:15042696, PMID:15063181 MGI:MGI:3039063, MGI:MGI:3051949 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:2389013|PMID:12421715), (MGI:MGI:3813176|PMID:18559345)
Ensembl
RGD
PMID:12421715, PMID:18559345 GO_REF:0000107, MGI:MGI:2389013, MGI:MGI:3813176 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:2153814 (MGI:MGI:2158598|PMID:11731698) RGD PMID:11731698 MGI:MGI:2158598 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Il6 interleukin 6 ISO (MGI:MGI:1932624|PMID:11275690) RGD PMID:11275690 MGI:MGI:1932624 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Lama1 laminin subunit alpha 1 ISO (MGI:MGI:2156962|PMID:11798066) RGD PMID:11798066 MGI:MGI:2156962 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Lama5 laminin subunit alpha 5 ISO (MGI:MGI:2678847|PMID:14568553) RGD PMID:14568553 MGI:MGI:2678847 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO (MGI:MGI:3813176|PMID:18559345) RGD PMID:18559345 MGI:MGI:3813176 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
IEA
MGI:MGI:1857796|MGI:MGI:99604 (MGI:MGI:3039063|PMID:15042696)
GO_REF:0000107
RGD
Ensembl
PMID:15042696 GO_REF:0000107, MGI:MGI:3039063 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Tgm2 transglutaminase 2 ISO (MGI:MGI:3588002|PMID:15970210) RGD PMID:15970210 MGI:MGI:3588002 NCBI chr 3:154,597,165...154,627,257
Ensembl chr 3:154,597,168...154,627,257
JBrowse link
branch elongation involved in salivary gland morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1859647 (MGI:MGI:3703378|PMID:15972105) RGD PMID:15972105 MGI:MGI:3703378 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:1099809|MGI:MGI:2153811 (MGI:MGI:3703378|PMID:15972105) RGD PMID:15972105 MGI:MGI:3703378 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
dichotomous subdivision of terminal units involved in salivary gland branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 ISO MGI:MGI:107558 (MGI:MGI:3720502|PMID:17626059) RGD PMID:17626059 MGI:MGI:3720502 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Plxna1 plexin A1 ISO (MGI:MGI:3720502|PMID:17626059) RGD PMID:17626059 MGI:MGI:3720502 NCBI chr 4:121,217,658...121,262,697
Ensembl chr 4:121,217,629...121,257,885
JBrowse link
G Plxnd1 plexin D1 ISO (MGI:MGI:3720502|PMID:17626059) RGD PMID:17626059 MGI:MGI:3720502 NCBI chr 4:147,854,309...147,894,170
Ensembl chr 4:147,854,309...147,893,992
JBrowse link
G Sema3a semaphorin 3A ISO MGI:MGI:106206 (MGI:MGI:3720502|PMID:17626059) RGD PMID:17626059 MGI:MGI:3720502 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035
JBrowse link
G Sema3c semaphorin 3C ISO (MGI:MGI:3720502|PMID:17626059) RGD PMID:17626059 MGI:MGI:3720502 NCBI chr 4:14,318,276...14,490,438
Ensembl chr 4:14,318,274...14,490,446
JBrowse link
regulation of branching involved in salivary gland morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd7 BTB domain containing 7 ISO (MGI:MGI:4820442|PMID:20671187) RGD PMID:20671187 MGI:MGI:4820442 NCBI chr 6:126,658,398...126,748,497
Ensembl chr 6:126,661,634...126,710,858
JBrowse link
G Cdh1 cadherin 1 ISO (MGI:MGI:3826736|PMID:18816447) RGD PMID:18816447 MGI:MGI:3826736 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Snai2 snail family transcriptional repressor 2 ISO (MGI:MGI:4820442|PMID:20671187) RGD PMID:20671187 MGI:MGI:4820442 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
G Tnf tumor necrosis factor ISO (MGI:MGI:1931422|PMID:11241200) RGD PMID:11241200 MGI:MGI:1931422 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfa platelet derived growth factor subunit A ISO
ISS
(MGI:MGI:3813176|PMID:18559345)
GO_REF:0000024
RGD
UniProt
PMID:18559345 GO_REF:0000024, MGI:MGI:3813176 NCBI chr12:17,734,141...17,756,186
Ensembl chr12:17,734,133...17,755,285
JBrowse link
regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntn4 netrin 4 ISO (MGI:MGI:3722516|PMID:17588941) RGD PMID:17588941 MGI:MGI:3722516 NCBI chr 7:34,533,543...34,649,330
Ensembl chr 7:34,533,543...34,649,481
JBrowse link
regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO (MGI:MGI:3813176|PMID:18559345) RGD PMID:18559345 MGI:MGI:3813176 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf7 fibroblast growth factor 7 ISO
IEA
(MGI:MGI:3813176|PMID:18559345)
GO_REF:0000107
RGD
Ensembl
PMID:18559345 GO_REF:0000107, MGI:MGI:3813176 NCBI chr 3:118,315,859...118,368,464
Ensembl chr 3:118,317,761...118,366,872
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO
IEA
(MGI:MGI:3813176|PMID:18559345)
GO_REF:0000107
RGD
Ensembl
PMID:18559345 GO_REF:0000107, MGI:MGI:3813176 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Hgf hepatocyte growth factor ISO (MGI:MGI:2677549|PMID:14517989)
(PMID:14517989)
RGD PMID:14517989 MGI:MGI:2677549 NCBI chr 4:15,435,460...15,505,377
Ensembl chr 4:15,433,295...15,505,362
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO (MGI:MGI:2677549|PMID:14517989) RGD PMID:14517989 MGI:MGI:2677549 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    multicellular organismal process 9055
      morphogenesis of a branching structure 248
        morphogenesis of a branching epithelium 229
          branching involved in salivary gland morphogenesis 28
            branch elongation involved in salivary gland morphogenesis 2
            branching involved in submandibular gland morphogenesis 0
            dichotomous subdivision of terminal units involved in salivary gland branching 5
            regulation of branching involved in salivary gland morphogenesis + 11
Path 2
Term Annotations click to browse term
  biological_process 20017
    developmental process 6813
      anatomical structure development 6256
        multicellular organism development 5735
          system development 5272
            animal organ development 4027
              gland development 664
                gland morphogenesis 168
                  salivary gland morphogenesis 41
                    branching involved in salivary gland morphogenesis 28
                      branch elongation involved in salivary gland morphogenesis 2
                      branching involved in submandibular gland morphogenesis 0
                      dichotomous subdivision of terminal units involved in salivary gland branching 5
                      regulation of branching involved in salivary gland morphogenesis + 11
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.