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ONTOLOGY REPORT - ANNOTATIONS


Term:skeletal muscle organ development
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Accession:GO:0060538 term browser browse the term
Definition:The progression of a skeletal muscle organ over time from its initial formation to its mature state. A skeletal muscle organ includes the skeletal muscle tissue and its associated connective tissue.


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skeletal muscle organ development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cntfr ciliary neurotrophic factor receptor JBrowse link 5 58,041,114 58,078,687 RGD:1624291
RGD:1600115
G Large1 LARGE xylosyl- and glucuronyltransferase 1 JBrowse link 19 12,481,563 12,945,320 RGD:1624291
RGD:1600115
G Mymx myomixer, myoblast fusion factor JBrowse link 9 17,781,397 17,783,074 RGD:1624291
RGD:13792537
G Pax3 paired box 3 JBrowse link 9 84,004,004 84,101,226 RGD:1624291
branchiomeric skeletal muscle development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Msc musculin JBrowse link 5 3,954,902 3,956,974 RGD:1624291
RGD:1600115
G Pitx1 paired-like homeodomain 1 JBrowse link 17 8,873,184 8,884,428 RGD:1624291
RGD:1600115
G Tcf21 transcription factor 21 JBrowse link 1 23,906,717 23,909,576 RGD:1624291
RGD:1600115
diaphragm development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asl argininosuccinate lyase JBrowse link 12 30,160,922 30,178,348 RGD:4139909
G Ass1 argininosuccinate synthase 1 JBrowse link 3 10,327,411 10,375,847 RGD:4139909
G Disp1 dispatched RND transporter family member 1 JBrowse link 13 101,451,932 101,597,570 RGD:1624291
RGD:1600115
G Fgfrl1 fibroblast growth factor receptor-like 1 JBrowse link 14 2,020,110 2,032,169 RGD:1624291
RGD:1600115
G Kcnab1 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 JBrowse link 2 155,555,798 156,011,438 RGD:9743957
G Mnx1 motor neuron and pancreas homeobox 1 JBrowse link 4 2,376,350 2,381,308 RGD:1624291
G Msc musculin JBrowse link 5 3,954,902 3,956,974 RGD:1624291
RGD:1600115
G Myt1 myelin transcription factor 1 JBrowse link 3 177,281,365 177,341,550 RGD:1624291
G Stra6 stimulated by retinoic acid 6 JBrowse link 8 62,925,364 62,944,438 RGD:1624291
RGD:1600115
G Tcf21 transcription factor 21 JBrowse link 1 23,906,717 23,909,576 RGD:1624291
RGD:1600115
G Wt1 WT1 transcription factor JBrowse link 3 95,133,221 95,180,574 RGD:1624291
RGD:1600115
extraocular skeletal muscle development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1s calcium voltage-gated channel subunit alpha1 S JBrowse link 13 52,889,570 52,964,558 RGD:1624291
G Foxl2 forkhead box L2 JBrowse link 8 107,194,492 107,197,644 RGD:1624291
RGD:1600115
G Myh15 myosin, heavy chain 15 JBrowse link 11 54,205,771 54,344,662 RGD:2317122
G Myom1 myomesin 1 JBrowse link 9 119,353,840 119,469,196 RGD:633368
G Myom2 myomesin 2 JBrowse link 16 79,587,136 79,672,871 RGD:633368
G Pitx2 paired-like homeodomain 2 JBrowse link 2 233,602,732 233,621,059 RGD:1624291
RGD:1600115
negative regulation of satellite cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akirin1 akirin 1 JBrowse link 5 141,415,226 141,430,627 RGD:1600115
RGD:1624291
G Ephb1 Eph receptor B1 JBrowse link 8 110,376,954 110,813,193 RGD:1624291
RGD:1600115
G Mstn myostatin JBrowse link 9 53,310,977 53,315,804 RGD:1600115
G Six4 SIX homeobox 4 JBrowse link 6 95,984,868 95,999,709 RGD:1624291
RGD:1600115
negative regulation of skeletal muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Capn3 calpain 3 JBrowse link 3 112,227,486 112,278,408 RGD:1624291
G Myocd myocardin JBrowse link 10 51,682,053 51,781,458 RGD:1624291
RGD:1600115
G S100b S100 calcium binding protein B JBrowse link 20 13,130,633 13,142,856 RGD:5508829
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 JBrowse link 1 248,952,896 248,956,579 RGD:1624291
G Nras NRAS proto-oncogene, GTPase JBrowse link 2 205,553,119 205,563,716 RGD:1624291
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1624291
RGD:1600115
G Tsc22d3 TSC22 domain family, member 3 JBrowse link X 111,884,285 111,944,693 RGD:1624291
G Twist1 twist family bHLH transcription factor 1 JBrowse link 6 53,401,241 53,403,235 RGD:1624291
RGD:1600115
G Usp19 ubiquitin specific peptidase 19 JBrowse link 8 117,280,690 117,291,729 RGD:1600115
RGD:1624291
G Usp2 ubiquitin specific peptidase 2 JBrowse link 8 48,403,985 48,432,525 RGD:634247
G Ybx3 Y box binding protein 3 JBrowse link 4 165,606,819 165,630,041 RGD:1624291
RGD:1600115
negative regulation of skeletal muscle tissue growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mstn myostatin JBrowse link 9 53,310,977 53,315,804 RGD:1601299
RGD:1624291
G Tll2 tolloid-like 2 JBrowse link 1 260,348,905 260,460,791 RGD:1624291
RGD:1600115
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pmp22 peripheral myelin protein 22 JBrowse link 10 49,538,588 49,568,583 RGD:1624291
positive regulation of skeletal muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arntl aryl hydrocarbon receptor nuclear translocator-like JBrowse link 1 178,039,002 178,137,469 RGD:1600115
RGD:1624291
G Gpc1 glypican 1 JBrowse link 9 99,998,275 100,026,818 RGD:1600115
RGD:1624291
G Mef2c myocyte enhancer factor 2C JBrowse link 2 11,658,534 11,822,788 RGD:1624291
RGD:1600115
G Mir675 microRNA 675 JBrowse link 1 215,745,981 215,746,064 RGD:1624291
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn3 actinin alpha 3 JBrowse link 1 220,120,532 220,136,460 RGD:1624291
RGD:1600115
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Lmod3 leiomodin 3 JBrowse link 4 129,604,378 129,619,136 RGD:1624291
RGD:1600115
G Myf5 myogenic factor 5 JBrowse link 7 49,729,533 49,732,974 RGD:13792537
G Myf6 myogenic factor 6 JBrowse link 7 49,739,643 49,741,490 RGD:13792537
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:13792537
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:1624291
RGD:13792537
RGD:1600115
G Shox2 short stature homeobox 2 JBrowse link 2 164,118,175 164,126,783 RGD:1624291
positive regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rbm24 RNA binding motif protein 24 JBrowse link 17 18,671,037 18,682,876 RGD:1624291
RGD:1600115
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdon cell adhesion associated, oncogene regulated JBrowse link 8 36,625,757 36,712,091 RGD:1624291
RGD:1600115
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1624291
RGD:1600115
G Flot1 flotillin 1 JBrowse link 20 3,427,890 3,438,418 RGD:1624291
RGD:1600115
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase JBrowse link 2 27,480,224 27,500,654 RGD:2317940
G Mef2c myocyte enhancer factor 2C JBrowse link 2 11,658,534 11,822,788 RGD:1624291
RGD:1600115
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 2 54,857,688 54,893,404 RGD:1624291
RGD:1600115
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:1624291
RGD:1600115
G Sox17 SRY-box transcription factor 17 JBrowse link 5 14,890,318 14,895,907 RGD:1624291
G Usp2 ubiquitin specific peptidase 2 JBrowse link 8 48,403,985 48,432,525 RGD:634247
G Wnt3a Wnt family member 3A JBrowse link 10 45,598,898 45,643,151 RGD:1624291
RGD:1600115
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn3 actinin alpha 3 JBrowse link 1 220,120,532 220,136,460 RGD:1624291
RGD:1600115
G Adrb2 adrenoceptor beta 2 JBrowse link 18 57,513,792 57,515,834 RGD:1598747
G Dll1 delta like canonical Notch ligand 1 JBrowse link 1 57,318,621 57,326,732 RGD:1600115
RGD:1624291
G Mtm1 myotubularin 1 JBrowse link 6 18,821,821 18,840,449 RGD:1624291
G Naca nascent polypeptide associated complex subunit alpha JBrowse link 7 2,458,283 2,470,674 RGD:1624291
G Rps6kb1 ribosomal protein S6 kinase B1 JBrowse link 10 73,824,200 73,865,503 RGD:1643018
positive regulation of tongue muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 JBrowse link 4 116,261,796 116,278,615 RGD:1624291
RGD:1600115
G Tbx1 T-box transcription factor 1 JBrowse link 11 86,552,022 86,561,647 RGD:1624291
RGD:1600115
regulation of skeletal muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddx17 DEAD-box helicase 17 JBrowse link 7 120,761,843 120,765,012 RGD:1624291
G Ddx5 DEAD-box helicase 5 JBrowse link 10 94,979,759 94,988,461 RGD:1624291
G Klhl41 kelch-like family member 41 JBrowse link 3 55,910,177 55,923,303 RGD:1624291
RGD:13792537
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 JBrowse link 15 8,730,871 8,757,165 RGD:1624291
RGD:1600115
G Rbfox1 RNA binding fox-1 homolog 1 JBrowse link 10 8,312,961 10,437,778 RGD:1624291
RGD:1600115
G Six1 SIX homeobox 1 JBrowse link 6 95,929,060 95,934,296 RGD:1624291
RGD:1600115
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 JBrowse link 20 5,712,200 5,723,902 RGD:1624291
RGD:1600115
regulation of skeletal muscle fiber development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxo22 F-box protein 22 JBrowse link 8 59,770,032 59,786,061 RGD:1624291
RGD:1600115
G Hdac4 histone deacetylase 4 JBrowse link 9 99,052,945 99,299,715 RGD:1624291
RGD:1600115
G Hdac5 histone deacetylase 5 JBrowse link 10 90,140,183 90,169,853 RGD:1624291
G Hdac9 histone deacetylase 9 JBrowse link 6 53,487,367 54,358,694 RGD:1624291
G Naca nascent polypeptide associated complex subunit alpha JBrowse link 7 2,458,283 2,470,674 RGD:1624291
regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nln neurolysin JBrowse link 2 34,086,970 34,185,835 RGD:1624291
RGD:1600115
regulation of skeletal muscle tissue development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvr1 activin A receptor type 1 JBrowse link 3 44,432,476 44,539,680 RGD:8554636
G Megf10 multiple EGF-like domains 10 JBrowse link 18 52,215,652 52,366,212 RGD:1624291
RGD:1600115
G Tcf7l2 transcription factor 7 like 2 JBrowse link 1 276,686,911 276,730,517 RGD:1624291
G Wnt10b Wnt family member 10B JBrowse link 7 140,448,284 140,466,159 RGD:1624291
RGD:1600115
regulation of skeletal muscle tissue growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dll1 delta like canonical Notch ligand 1 JBrowse link 1 57,318,621 57,326,732 RGD:1624291
RGD:1600115
skeletal muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd1 ankyrin repeat domain 1 JBrowse link 1 254,726,985 254,745,673 RGD:1624291
RGD:1600115
G Ankrd2 ankyrin repeat domain 2 JBrowse link 1 261,281,859 261,291,307 RGD:1624291
RGD:1600115
G Ankrd33 ankyrin repeat domain 33 JBrowse link 7 142,755,896 142,759,666 RGD:1624291
G Asb2 ankyrin repeat and SOCS box-containing 2 JBrowse link 6 127,212,325 127,248,451 RGD:1624291
G Atf3 activating transcription factor 3 JBrowse link 13 109,817,892 109,849,632 RGD:1624291
RGD:1600115
G Bcl9 BCL9, transcription coactivator JBrowse link 2 199,334,644 199,420,083 RGD:1624291
RGD:1600115
G Bcl9l BCL9 like JBrowse link 8 48,805,684 48,835,794 RGD:1624291
RGD:1600115
G Btg2 BTG anti-proliferation factor 2 JBrowse link 13 50,913,185 50,916,944 RGD:1624291
RGD:1600115
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 1 12,823,363 12,825,806 RGD:1624291
RGD:1600115
G Cops2 COP9 signalosome subunit 2 JBrowse link 3 118,109,394 118,137,125 RGD:1624291
RGD:1600115
G Dmrta2 DMRT-like family A2 JBrowse link 5 129,754,295 129,760,045 RGD:1624291
G Eef2 eukaryotic translation elongation factor 2 JBrowse link 7 11,401,501 11,406,771 RGD:10401256
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:1624291
RGD:1600115
G Egr2 early growth response 2 JBrowse link 20 22,452,170 22,461,018 RGD:1624291
RGD:1600115
G Emd emerin JBrowse link X 156,452,847 156,455,858 RGD:1624291
RGD:1600115
G Eomes eomesodermin JBrowse link 8 127,144,367 127,152,618 RGD:1624291
RGD:1600115
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:1624291
RGD:1600115
G Foxn2 forkhead box N2 JBrowse link 6 12,158,127 12,205,450 RGD:1624291
RGD:1600115
G Gtf3c5 general transcription factor IIIC subunit 5 JBrowse link 3 7,144,354 7,164,678 RGD:1624291
RGD:1600115
G Heyl hes-related family bHLH transcription factor with YRPW motif-like JBrowse link 5 140,923,914 140,940,905 RGD:1624291
RGD:1600115
G Hivep3 human immunodeficiency virus type I enhancer binding protein 3 JBrowse link 5 138,774,501 139,077,403 RGD:1624291
RGD:1600115
G Hlf HLF transcription factor, PAR bZIP family member JBrowse link 10 77,836,352 77,918,656 RGD:1624291
RGD:1600115
G Hmg20b high mobility group 20 B JBrowse link 7 11,238,594 11,243,312 RGD:1624291
RGD:1600115
G Klf5 Kruppel-like factor 5 JBrowse link 15 83,703,796 83,722,921 RGD:1624291
G Klhl41 kelch-like family member 41 JBrowse link 3 55,910,177 55,923,303 RGD:1624291
RGD:1600115
G Lemd2 LEM domain containing 2 JBrowse link 20 5,779,742 5,786,213 RGD:1624291
RGD:1600115
G Lemd3 LEM domain containing 3 JBrowse link 7 62,976,671 63,045,860 RGD:1624291
G LOC108348120 LEM domain-containing protein 2-like JBrowse link 20 6,544,925 6,556,668 RGD:1600115
G Maff MAF bZIP transcription factor F JBrowse link 7 120,580,743 120,592,095 RGD:1624291
RGD:1600115
G Med20 mediator complex subunit 20 JBrowse link 9 15,379,379 15,393,131 RGD:1624291
G Mef2c myocyte enhancer factor 2C JBrowse link 2 11,658,534 11,822,788 RGD:1624291
RGD:1600115
G Mef2d myocyte enhancer factor 2D JBrowse link 2 187,511,775 187,541,285 RGD:1624291
RGD:1600115
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:1624291
G Myf5 myogenic factor 5 JBrowse link 7 49,729,533 49,732,974 RGD:1624291
RGD:13792537
G Myf6 myogenic factor 6 JBrowse link 7 49,739,643 49,741,490 RGD:1624291
RGD:13792537
G Mylk2 myosin light chain kinase 2 JBrowse link 3 148,386,185 148,397,851 RGD:1624291
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:1624291
RGD:13792537
RGD:1600115
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:13792537
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:1580249
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1624291
RGD:1600115
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 JBrowse link 7 142,899,358 142,920,216 RGD:1624291
RGD:1600115
G Nupr1 nuclear protein 1, transcriptional regulator JBrowse link 1 194,767,484 194,769,519 RGD:1624291
G Pax5 paired box 5 JBrowse link 5 60,007,587 60,191,973 RGD:1624291
RGD:1600115
G Phox2b paired-like homeobox 2b JBrowse link 14 42,711,169 42,718,707 RGD:1624291
RGD:1600115
G Plagl1 PLAG1 like zinc finger 1 JBrowse link 1 7,219,587 7,270,169 RGD:1624291
G Rb1 RB transcriptional corepressor 1 JBrowse link 15 55,081,582 55,209,060 RGD:1624291
RGD:1600115
G Sap30 Sin3A associated protein 30 JBrowse link 16 36,115,942 36,121,310 RGD:1624291
RGD:1600115
G Scx scleraxis bHLH transcription factor JBrowse link 7 117,519,075 117,521,093 RGD:1624291
RGD:1600115
G Smyd1 SET and MYND domain containing 1 JBrowse link 4 99,071,122 99,125,143 RGD:1624291
RGD:1600115
G Snw1 SNW domain containing 1 JBrowse link 6 111,483,698 111,507,782 RGD:1624291
G Sox11 SRY-box transcription factor 11 JBrowse link 6 46,629,967 46,631,988 RGD:1624291
RGD:1600115
G Sox8 SRY-box transcription factor 8 JBrowse link 10 14,932,348 14,937,336 RGD:1624291
RGD:1600115
G Vax1 ventral anterior homeobox 1 JBrowse link 1 280,334,897 280,338,813 RGD:1624291
RGD:1600115
G Wnt3a Wnt family member 3A JBrowse link 10 45,598,898 45,643,151 RGD:1624291
RGD:1600115
G Zfp689 zinc finger protein 689 JBrowse link 1 198,894,000 198,900,364 RGD:1624291
skeletal muscle fiber development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acta1 actin, alpha 1, skeletal muscle JBrowse link 19 56,674,072 56,677,084 RGD:1624291
RGD:1600115
G Actn1 actinin, alpha 1 JBrowse link 6 103,376,557 103,470,497 RGD:1600115
G Bin3 bridging integrator 3 JBrowse link 15 51,799,339 51,818,697 RGD:1624291
RGD:1600115
G Cacna1s calcium voltage-gated channel subunit alpha1 S JBrowse link 13 52,889,570 52,964,558 RGD:1624291
G Cav2 caveolin 2 JBrowse link 4 44,573,264 44,580,640 RGD:1624291
RGD:1600115
G Dner delta/notch-like EGF repeat containing JBrowse link 9 91,965,866 92,291,172 RGD:1624291
RGD:1600115
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:1624291
RGD:1600115
G Homer1 homer scaffold protein 1 JBrowse link 2 22,909,550 23,012,303 RGD:1624291
RGD:1600115
G Kel Kell metallo-endopeptidase (Kell blood group) JBrowse link 4 70,979,504 70,996,920 RGD:1624291
RGD:1600115
G Klhl40 kelch-like family member 40 JBrowse link 8 130,416,265 130,421,871 RGD:1624291
RGD:13792537
G Klhl41 kelch-like family member 41 JBrowse link 3 55,910,177 55,923,303 RGD:1600115
G Lmod3 leiomodin 3 JBrowse link 4 129,604,378 129,619,136 RGD:1624291
RGD:1600115
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:1624291
RGD:1600115
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:1624291
G Myorg myogenesis regulating glycosidase JBrowse link 5 57,873,404 57,882,008 RGD:1624291
RGD:13792537
G Nfatc3 nuclear factor of activated T-cells 3 JBrowse link 19 38,039,542 38,114,003 RGD:1624291
G P2rx2 purinergic receptor P2X 2 JBrowse link 12 52,397,666 52,401,005 RGD:1624291
RGD:1600115
G Ppp3ca protein phosphatase 3 catalytic subunit alpha JBrowse link 2 241,909,332 242,186,861 RGD:1624291
RGD:1600115
G Rcan1 regulator of calcineurin 1 JBrowse link 11 32,539,689 32,620,274 RGD:1624291
G Ripor2 RHO family interacting cell polarization regulator 2 JBrowse link 17 42,324,594 42,549,907 RGD:1600115
G Ryr1 ryanodine receptor 1 JBrowse link 1 87,959,596 88,066,252 RGD:1600115
RGD:1624291
G Selenon selenoprotein N JBrowse link 5 152,748,497 152,765,489 RGD:1624291
RGD:13792537
G Six1 SIX homeobox 1 JBrowse link 6 95,929,060 95,934,296 RGD:13792537
G Ski SKI proto-oncogene JBrowse link 5 172,556,196 172,623,878 RGD:1624291
G Smo smoothened, frizzled class receptor JBrowse link 4 57,019,941 57,041,779 RGD:1624291
RGD:1600115
G Stac3 SH3 and cysteine rich domain 3 JBrowse link 7 70,807,427 70,815,271 RGD:1624291
RGD:1600115
G Wnt10b Wnt family member 10B JBrowse link 7 140,448,284 140,466,159 RGD:1624291
RGD:1600115
G Xk X-linked Kx blood group JBrowse link X 14,497,376 14,534,479 RGD:1624291
RGD:1600115
skeletal muscle fiber differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Klhl40 kelch-like family member 40 JBrowse link 8 130,416,265 130,421,871 RGD:1624291
G Six4 SIX homeobox 4 JBrowse link 6 95,984,868 95,999,709 RGD:1624291
RGD:1600115
skeletal muscle satellite cell commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax7 paired box 7 JBrowse link 5 158,211,001 158,313,510 RGD:1624291
RGD:1600115
skeletal muscle satellite cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdon cell adhesion associated, oncogene regulated JBrowse link 8 36,625,757 36,712,091 RGD:1624291
RGD:1600115
G Klf5 Kruppel-like factor 5 JBrowse link 15 83,703,796 83,722,921 RGD:1624291
RGD:1600115
G Megf10 multiple EGF-like domains 10 JBrowse link 18 52,215,652 52,366,212 RGD:1624291
RGD:1600115
G Mylk2 myosin light chain kinase 2 JBrowse link 3 148,386,185 148,397,851 RGD:1600115
RGD:1624291
G Selenon selenoprotein N JBrowse link 5 152,748,497 152,765,489 RGD:1624291
RGD:1600115
skeletal muscle tissue development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bves blood vessel epicardial substance JBrowse link 20 50,439,885 50,474,678 RGD:1624291
RGD:13792537
RGD:1600115
G Cacna1s calcium voltage-gated channel subunit alpha1 S JBrowse link 13 52,889,570 52,964,558 RGD:1624291
G Casq1 calsequestrin 1 JBrowse link 13 90,592,676 90,602,365 RGD:2313254
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:1624291
RGD:1600115
G Ccnt2 cyclin T2 JBrowse link 13 44,475,959 44,516,892 RGD:1624291
RGD:1600115
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:1598429
RGD:8554712
RGD:1624291
G Cfl2 cofilin 2 JBrowse link 6 75,759,140 75,763,185 RGD:1624291
RGD:1600115
G Cflar CASP8 and FADD-like apoptosis regulator JBrowse link 9 65,534,608 65,586,395 RGD:1624291
RGD:1600115
G Ckmt1 creatine kinase, mitochondrial 1 JBrowse link 3 113,318,559 113,324,459 RGD:11565082
G Ckmt2 creatine kinase, mitochondrial 2 JBrowse link 2 21,422,680 21,452,797 RGD:11565082
G Col19a1 collagen type XIX alpha 1 chain JBrowse link 9 30,508,003 30,864,836 RGD:1624291
RGD:1600115
G Csf1r colony stimulating factor 1 receptor JBrowse link 18 56,414,493 56,458,300 RGD:727559
G Ctsb cathepsin B JBrowse link 15 46,316,741 46,337,613 RGD:1599532
G Dcn decorin JBrowse link 7 38,742,250 38,782,282 RGD:2303553
G Dmd dystrophin JBrowse link X 51,149,358 53,519,271 RGD:1624291
RGD:1600115
G Dysf dysferlin JBrowse link 4 115,700,942 115,901,873 RGD:1624291
G Eln elastin JBrowse link 12 24,978,478 25,021,864 RGD:1624291
RGD:1600115
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:1624291
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:2289973
G Erbb3 erb-b2 receptor tyrosine kinase 3 JBrowse link 7 2,989,202 3,010,610 RGD:2289973
G Flnb filamin B JBrowse link 15 18,750,152 18,883,019 RGD:1624291
RGD:1600115
G Foxp1 forkhead box P1 JBrowse link 4 131,362,178 131,963,466 RGD:1624291
RGD:1600115
G Foxp2 forkhead box P2 JBrowse link 4 41,364,441 41,944,685 RGD:1624291
RGD:1600115
G Gpcpd1 glycerophosphocholine phosphodiesterase 1 JBrowse link 3 125,169,131 125,213,598 RGD:1624291
RGD:1600115
G H19 H19, imprinted maternally expressed transcript (non-protein coding) JBrowse link 1 215,744,404 215,747,080 RGD:2306191
G Hdac6 histone deacetylase 6 JBrowse link X 15,295,372 15,316,673 RGD:1624291
G Hlx H2.0-like homeobox JBrowse link 13 102,637,967 102,643,376 RGD:1624291
RGD:1600115
G Hoxd10 homeo box D10 JBrowse link 3 61,614,133 61,617,342 RGD:1624291
RGD:1600115
G Hoxd9 homeo box D9 JBrowse link 3 61,620,192 61,622,360 RGD:1624291
RGD:1600115
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059373
G Itga7 integrin subunit alpha 7 JBrowse link 7 3,355,079 3,383,886 RGD:70774
G Kcnab1 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 JBrowse link 2 155,555,798 156,011,438 RGD:9743957
G Mapk14 mitogen activated protein kinase 14 JBrowse link 20 5,933,290 5,995,137 RGD:1624291
RGD:1600115
G Mbnl1 muscleblind-like splicing regulator 1 JBrowse link 2 150,698,248 150,867,791 RGD:1624291
G Mef2c myocyte enhancer factor 2C JBrowse link 2 11,658,534 11,822,788 RGD:1624291
G Meox2 mesenchyme homeobox 2 JBrowse link 6 56,625,768 56,689,195 RGD:1624291
RGD:1600115
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:1624291
G Mettl21c methyltransferase like 21C JBrowse link 9 50,750,971 50,762,082 RGD:1624291
RGD:1600115
G Mettl8 methyltransferase like 8 JBrowse link 3 57,257,394 57,642,096 RGD:1624291
G Myf5 myogenic factor 5 JBrowse link 7 49,729,533 49,732,974 RGD:1624291
G Myf6 myogenic factor 6 JBrowse link 7 49,739,643 49,741,490 RGD:1624291
G Myh14 myosin heavy chain 14 JBrowse link 1 100,608,975 100,671,086 RGD:1624291
RGD:1600115
G Myl3 myosin light chain 3 JBrowse link 8 119,030,852 119,036,996 RGD:633442
G Myl6l myosin, light polypeptide 6, alkali, smooth muscle and non-muscle-like RGD:8554813
G Mylpf myosin light chain, phosphorylatable, fast skeletal muscle JBrowse link 1 198,655,835 198,658,590 RGD:633441
RGD:1624291
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:8554476
RGD:1624291
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:1624291
G Myoz1 myozenin 1 JBrowse link 15 4,077,066 4,084,306 RGD:1600115
RGD:1624291
G Myoz2 myozenin 2 JBrowse link 2 227,180,887 227,207,629 RGD:1600115
RGD:1624291
G Ncor1 nuclear receptor co-repressor 1 JBrowse link 10 48,629,121 48,772,890 RGD:5688344
G Neurl1 neuralized E3 ubiquitin protein ligase 1 JBrowse link 1 266,953,006 267,038,879 RGD:2302390
G Nf1 neurofibromin 1 JBrowse link 10 66,732,460 66,928,706 RGD:1624291
RGD:1600115
G Nphs1 NPHS1 adhesion molecule, nephrin JBrowse link 1 88,922,346 88,950,560 RGD:1600115
RGD:1624291
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 JBrowse link 1 131,447,671 131,465,749 RGD:1600115
RGD:1624291
G Pax7 paired box 7 JBrowse link 5 158,211,001 158,313,510 RGD:1624291
G Pdlim3 PDZ and LIM domain 3 JBrowse link 16 49,543,140 49,574,362 RGD:1624291
G Pitx2 paired-like homeodomain 2 JBrowse link 2 233,602,732 233,621,059 RGD:1624291
G Popdc2 popeye domain containing 2 JBrowse link 11 64,915,041 64,954,704 RGD:13792537
G Popdc3 popeye domain containing 3 JBrowse link 20 50,394,617 50,422,551 RGD:13792537
G Rcan1 regulator of calcineurin 1 JBrowse link 11 32,539,689 32,620,274 RGD:1304341
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:1624291
RGD:1600115
G Rxrg retinoid X receptor gamma JBrowse link 13 85,818,473 85,868,555 RGD:633976
G Sgce sarcoglycan, epsilon JBrowse link 4 29,726,140 29,769,902 RGD:1303966
G Sin3b SIN3 transcription regulator family member B JBrowse link 16 18,842,456 18,860,086 RGD:1624291
G Six1 SIX homeobox 1 JBrowse link 6 95,929,060 95,934,296 RGD:1624291
RGD:13792537
G Six4 SIX homeobox 4 JBrowse link 6 95,984,868 95,999,709 RGD:1624291
G Skil SKI-like proto-oncogene JBrowse link 2 115,862,932 115,891,304 RGD:1624291
G Srpk3 SRSF protein kinase 3 JBrowse link X 157,008,773 157,014,342 RGD:1624291
RGD:1600115
G Svil supervillin JBrowse link 17 55,230,298 55,425,967 RGD:1624291
RGD:1600115
G Taz tafazzin JBrowse link X 156,421,006 156,429,461 RGD:1624291
RGD:1600115
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:2302095
G Vamp5 vesicle-associated membrane protein 5 JBrowse link 4 100,231,561 100,232,560 RGD:1624291
RGD:1600115
G Vgll2 vestigial-like family member 2 JBrowse link 20 33,077,106 33,082,962 RGD:1624291
RGD:1600115
G Zbtb18 zinc finger and BTB domain containing 18 JBrowse link 13 95,582,234 95,593,316 RGD:1624291
RGD:1600115
skeletal muscle tissue growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit JBrowse link 3 60,445,657 60,460,724 RGD:1624291
RGD:1600115
G Chrnd cholinergic receptor nicotinic delta subunit JBrowse link 9 94,286,550 94,294,968 RGD:1624291
RGD:1600115
G Crhr2 corticotropin releasing hormone receptor 2 JBrowse link 4 85,286,371 85,329,374 RGD:5130936
G Dll1 delta like canonical Notch ligand 1 JBrowse link 1 57,318,621 57,326,732 RGD:1600115
RGD:1624291
G P2rx5 purinergic receptor P2X 5 JBrowse link 10 59,725,438 59,737,126 RGD:729229

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18179
    developmental process 6551
      anatomical structure development 6031
        muscle structure development 708
          muscle organ development 416
            skeletal muscle organ development 219
              diaphragm development + 11
              extraocular skeletal muscle development + 6
              muscle attachment + 0
              skeletal muscle tissue development + 207
              somitomeric trunk muscle development + 0
Path 2
Term Annotations click to browse term
  biological_process 18179
    developmental process 6551
      anatomical structure development 6031
        multicellular organism development 5511
          system development 5062
            animal organ development 3866
              muscle organ development 416
                skeletal muscle organ development 219
                  diaphragm development + 11
                  extraocular skeletal muscle development + 6
                  muscle attachment + 0
                  skeletal muscle tissue development + 207
                  somitomeric trunk muscle development + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.