ONTOLOGY REPORT - ANNOTATIONS


Term:apoptotic process involved in morphogenesis
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Accession:GO:0060561 term browser browse the term
Definition:Any apoptotic process that contributes to the shaping of an anatomical structure.
Synonyms:narrow_synonym: apoptosis involved in morphogenesis
 related_synonym: apoptosis involved in development;   morphogenetic apoptosis


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apoptotic process involved in morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cryaa crystallin, alpha A JBrowse link 20 10,438,444 10,442,189 RGD:1624291
RGD:1600115
G Cryab crystallin, alpha B JBrowse link 8 55,178,543 55,182,546 RGD:1624291
RGD:1600115
G Fgf4 fibroblast growth factor 4 JBrowse link 1 218,024,537 218,029,539 RGD:1624291
RGD:1600115
G Fzd5 frizzled class receptor 5 JBrowse link 9 71,443,784 71,445,541 RGD:1624291
RGD:1600115
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 2 236,232,115 236,345,061 RGD:1624291
RGD:13792537
G Ppp2r1b protein phosphatase 2 scaffold subunit A beta JBrowse link 8 55,279,278 55,311,768 RGD:1624291
RGD:1600115
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:1624291
RGD:1600115
apoptotic process involved in blood vessel morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bak1 BCL2-antagonist/killer 1 JBrowse link 20 5,609,620 5,618,899 RGD:1624291
RGD:1600115
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:1624291
RGD:1600115
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 2 236,232,115 236,345,061 RGD:1624291
RGD:1600115
G Lrp5 LDL receptor related protein 5 JBrowse link 1 218,816,833 218,920,147 RGD:1624291
RGD:1600115
G Spi1 Spi-1 proto-oncogene JBrowse link 3 79,918,127 79,937,708 RGD:1624291
RGD:1600115
G Wnt7b Wnt family member 7B JBrowse link 7 126,423,418 126,465,724 RGD:1624291
apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:1624291
RGD:1600115
G Bcl2l11 BCL2 like 11 JBrowse link 3 120,726,906 120,764,192 RGD:1624291
RGD:1600115
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1624291
RGD:1600115
apoptotic process involved in endocardial cushion morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:1624291
apoptotic process involved in heart morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccn1 cellular communication network factor 1 JBrowse link 2 251,529,354 251,532,312 RGD:1624291
RGD:1600115
G Hand2 heart and neural crest derivatives expressed 2 JBrowse link 16 36,371,489 36,373,551 RGD:1624291
G Nkx2-5 NK2 homeobox 5 JBrowse link 10 16,635,989 16,638,758 RGD:1624291
RGD:1600115
epithelial cell apoptotic process involved in palatal shelf morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Jag2 jagged canonical Notch ligand 2 JBrowse link 6 137,711,144 137,733,331 RGD:1624291
RGD:1600115
negative regulation of apoptotic process involved in morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tgfbr3 transforming growth factor beta receptor 3 JBrowse link 14 3,506,416 3,680,508 RGD:1624291
negative regulation of apoptotic process involved in outflow tract morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxc1 forkhead box C1 JBrowse link 17 33,947,501 33,951,484 RGD:1624291
RGD:1600115
G Foxc2 forkhead box C2 JBrowse link 19 53,044,379 53,047,081 RGD:1624291
RGD:1600115
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hnf1b HNF1 homeobox B JBrowse link 10 71,159,863 71,218,902 RGD:1624291
RGD:1600115
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax2 paired box 2 JBrowse link 1 264,493,579 264,585,073 RGD:1624291
RGD:1600115
G Pax8 paired box 8 JBrowse link 3 1,527,316 1,586,019 RGD:1624291
RGD:1600115
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp7 bone morphogenetic protein 7 JBrowse link 3 170,879,972 170,955,820 RGD:1624291
RGD:1600115
positive regulation of apoptotic process involved in mammary gland involution term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G B4galt1 beta-1,4-galactosyltransferase 1 JBrowse link 5 57,121,768 57,168,610 RGD:1624291
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:1624291
RGD:1600115
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:1624291
G Pml promyelocytic leukemia JBrowse link 8 63,002,515 63,034,310 RGD:1624291
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:1624291
RGD:1600115
positive regulation of apoptotic process involved in morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1600115
RGD:1624291
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:1624291
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:1600115
RGD:1624291
regulation of apoptotic process involved in outflow tract morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17895
    developmental process 6321
      anatomical structure morphogenesis 2728
        apoptotic process involved in morphogenesis 33
          apoptotic process involved in blood vessel morphogenesis 6
          apoptotic process involved in embryonic digit morphogenesis 3
          apoptotic process involved in heart morphogenesis + 7
          apoptotic process involved in mammary gland involution + 5
          apoptotic process involved in tube lumen cavitation + 0
          clearance of cells from fusion plate by apoptotic process 0
          epithelial cell apoptotic process involved in palatal shelf morphogenesis 1
          mesenchymal cell apoptotic process involved in nephron morphogenesis + 4
          negative regulation of apoptotic process involved in morphogenesis + 7
          positive regulation of apoptotic process involved in morphogenesis + 8
          regulation of apoptotic process involved in morphogenesis + 16
Path 2
Term Annotations click to browse term
  biological_process 17895
    cellular process 16036
      cell death 2086
        programmed cell death 1914
          apoptotic process 1869
            apoptotic process involved in development 46
              apoptotic process involved in morphogenesis 33
                apoptotic process involved in blood vessel morphogenesis 6
                apoptotic process involved in embryonic digit morphogenesis 3
                apoptotic process involved in heart morphogenesis + 7
                apoptotic process involved in mammary gland involution + 5
                apoptotic process involved in tube lumen cavitation + 0
                clearance of cells from fusion plate by apoptotic process 0
                epithelial cell apoptotic process involved in palatal shelf morphogenesis 1
                mesenchymal cell apoptotic process involved in nephron morphogenesis + 4
                negative regulation of apoptotic process involved in morphogenesis + 7
                positive regulation of apoptotic process involved in morphogenesis + 8
                regulation of apoptotic process involved in morphogenesis + 16
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.