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ONTOLOGY REPORT - ANNOTATIONS


Term:epithelial tube morphogenesis
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Accession:GO:0060562 term browser browse the term
Definition:The process in which the anatomical structures of a tube are generated and organized from an epithelium. Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.


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epithelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Greb1l GREB1 like retinoic acid receptor coactivator ISO (MGI:MGI:6094060|PMID:29100091) RGD PMID:29100091 MGI:MGI:6094060 NCBI chr18:1,537,315...1,784,260
Ensembl chr18:1,723,565...1,784,233
JBrowse link
G Prkx protein kinase, X-linked ISO (PMID:17980165) RGD PMID:17980165 NCBI chr  X:45,080,963...45,125,095
Ensembl chr  X:45,080,963...45,124,270
JBrowse link
anterior neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 ISO MGI:MGI:5056374 (MGI:MGI:5050793|PMID:21515572) RGD PMID:21515572 MGI:MGI:5050793 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Folr1 folate receptor alpha ISO (MGI:MGI:3721767|PMID:17286298) RGD PMID:17286298 MGI:MGI:3721767 NCBI chr 1:166,934,457...166,945,864
Ensembl chr 1:166,934,460...166,943,592
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 ISO MGI:MGI:5056365 (MGI:MGI:5050793|PMID:21515572) RGD PMID:21515572 MGI:MGI:5050793 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1-like ISO MGI:MGI:4124253|MGI:MGI:4128888 (MGI:MGI:6101898|PMID:26787558) RGD PMID:26787558 MGI:MGI:6101898 NCBI chr20:14,287,470...14,393,879
Ensembl chr20:14,287,457...14,393,793
JBrowse link
anterior neuropore closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatad2a GATA zinc finger domain containing 2A ISO (MGI:MGI:3762244|PMID:17565372) RGD PMID:17565372 MGI:MGI:3762244 NCBI chr16:21,177,793...21,267,768
Ensembl chr16:21,178,138...21,268,504
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO MGI:MGI:1888387 (MGI:MGI:80520|PMID:8622765) RGD PMID:8622765 MGI:MGI:80520 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
blood vessel lumenization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll4 delta like canonical Notch ligand 4 ISO (MGI:MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:MGI:3056004 NCBI chr 3:111,135,011...111,146,746
Ensembl chr 3:111,135,021...111,145,986
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:MGI:3056004 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
BMP signaling pathway involved in nephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:10021330)
Ensembl
UniProt
RGD
PMID:10021330 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb1 transforming growth factor, beta 1 ISO MGI:MGI:1857258 (MGI:MGI:3814777|PMID:18614704) RGD PMID:18614704 MGI:MGI:3814777 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf1 fibroblast growth factor 1 ISO
ISS
(PMID:11731227)
GO_REF:0000024
RGD
UniProt
PMID:11731227 GO_REF:0000024 NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824
JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO
IEA
MGI:MGI:2386570|MGI:MGI:2651395 (MGI:MGI:3703113|PMID:17078885)
GO_REF:0000107
RGD
Ensembl
PMID:17078885 GO_REF:0000107, MGI:MGI:3703113 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G Ahr aryl hydrocarbon receptor ISO (MGI:MGI:1889403|PMID:10973493) RGD PMID:10973493 MGI:MGI:1889403 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Col4a1 collagen type IV alpha 1 chain ISO (PMID:20818663) RGD PMID:20818663 NCBI chr16:83,522,162...83,632,153
Ensembl chr16:83,522,162...83,632,153
JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:MGI:1858008|MGI:MGI:2148567 (MGI:MGI:2675534|PMID:12975353), (MGI:MGI:3833040|PMID:19154719)
Ensembl
RGD
PMID:12975353, PMID:19154719 GO_REF:0000107, MGI:MGI:2675534, MGI:MGI:3833040 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO MGI:MGI:1934384 (MGI:MGI:3578491|PMID:15626744) RGD PMID:15626744 MGI:MGI:3578491 NCBI chr 4:149,261,044...149,273,891
Ensembl chr 4:149,261,044...149,273,891
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ISO MGI:MGI:1934442 (MGI:MGI:3578491|PMID:15626744) RGD PMID:15626744 MGI:MGI:3578491 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO (MGI:MGI:3056036|PMID:15466159) RGD PMID:15466159 MGI:MGI:3056036 NCBI chr 3:111,135,011...111,146,746
Ensembl chr 3:111,135,021...111,145,986
JBrowse link
G Edn1 endothelin 1 ISO MGI:MGI:1857637 (MGI:MGI:74210|PMID:7615798) RGD PMID:7615798 MGI:MGI:74210 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Ednra endothelin receptor type A ISO
IEA
MGI:MGI:1347481 (MGI:MGI:3606840|PMID:15664398)
GO_REF:0000107
RGD
Ensembl
PMID:15664398 GO_REF:0000107, MGI:MGI:3606840 NCBI chr19:33,928,356...33,991,703
Ensembl chr19:33,928,356...33,991,703
JBrowse link
G Eng endoglin ISO (MGI:MGI:1337912|PMID:10348742) RGD PMID:10348742 MGI:MGI:1337912 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:MGI:95668 (MGI:MGI:3588904|PMID:15996652) RGD PMID:15996652 MGI:MGI:3588904 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 ISO MGI:MGI:1857717 (MGI:MGI:3045573|PMID:14982871) RGD PMID:14982871 MGI:MGI:3045573 NCBI chr12:9,033,993...9,205,886
Ensembl chr12:9,034,308...9,205,905
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:MGI:105923 (MGI:MGI:3606840|PMID:15664398) RGD PMID:15664398 MGI:MGI:3606840 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Gbx2 gastrulation brain homeobox 2 ISO MGI:MGI:1857634|MGI:MGI:99604 (MGI:MGI:3588904|PMID:15996652) RGD PMID:15996652 MGI:MGI:3588904 NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817
JBrowse link
G Gdf2 growth differentiation factor 2 ISO (MGI:MGI:4830635|PMID:20406889)
(PMID:20406889)
RGD PMID:20406889 MGI:MGI:4830635 NCBI chr16:10,267,510...10,293,545
Ensembl chr16:10,267,482...10,273,239
JBrowse link
G Gna13 G protein subunit alpha 13 ISO MGI:MGI:2450311|MGI:MGI:3583876 (MGI:MGI:3583513|PMID:15919816) RGD PMID:15919816 MGI:MGI:3583513 NCBI chr10:97,647,196...97,680,030
Ensembl chr10:97,647,111...97,684,730
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:MGI:1934258 (MGI:MGI:3574706|PMID:15689378) RGD PMID:15689378 MGI:MGI:3574706 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Kdr kinase insert domain receptor ISO
IEA
(PMID:23688497)
GO_REF:0000107
RGD
Ensembl
PMID:23688497 GO_REF:0000107 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO
IEA
MGI:MGI:1926601 (MGI:MGI:3833040|PMID:19154719)
GO_REF:0000107
RGD
Ensembl
PMID:19154719 GO_REF:0000107, MGI:MGI:3833040 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 ISO MGI:MGI:1920431 (MGI:MGI:2136698|PMID:11439183) RGD PMID:11439183 MGI:MGI:2136698 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 ISO MGI:MGI:103296 (MGI:MGI:2136698|PMID:11439183) RGD PMID:11439183 MGI:MGI:2136698 NCBI chr15:34,493,163...34,502,238
Ensembl chr15:34,493,138...34,504,326
JBrowse link
G Notch4 notch receptor 4 ISO (MGI:MGI:1934537|PMID:11344305) RGD PMID:11344305 MGI:MGI:1934537 NCBI chr20:4,329,794...4,353,868
Ensembl chr20:4,329,811...4,353,785
JBrowse link
G Nrarp Notch-regulated ankyrin repeat protein ISO
IBA
MGI:MGI:3833551 (MGI:MGI:3833040|PMID:19154719)
PMID:21873635
RGD PMID:19154719, PMID:21873635 MGI:MGI:3833040, RGD:13792537 NCBI chr 3:2,396,143...2,398,697
Ensembl chr 3:2,396,143...2,398,689
JBrowse link
G Nrp1 neuropilin 1 ISO MGI:MGI:3512099 (MGI:MGI:3710026|PMID:17428830), (MGI:MGI:5288256|PMID:21852397), (MGI:MGI:5484470|PMID:23315162), (MGI:MGI:5562961|PMID:24401374) RGD PMID:17428830, PMID:21852397, PMID:23315162, PMID:24401374 MGI:MGI:3710026, MGI:MGI:5288256, MGI:MGI:5484470, MGI:MGI:5562961 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO MGI:MGI:2445428 (MGI:MGI:2389284|PMID:12397115) RGD PMID:12397115 MGI:MGI:2389284 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Plxnd1 plexin D1 ISO MGI:MGI:3050678|MGI:MGI:5544786 (MGI:MGI:3050159|PMID:15239958), (MGI:MGI:5509072|PMID:23918385) RGD PMID:15239958, PMID:23918385 MGI:MGI:3050159, MGI:MGI:5509072 NCBI chr 4:147,854,309...147,894,170
Ensembl chr 4:147,854,309...147,893,992
JBrowse link
G Ppp3r1 protein phosphatase 3, regulatory subunit B, alpha ISO MGI:MGI:3043986 (MGI:MGI:2136698|PMID:11439183) RGD PMID:11439183 MGI:MGI:2136698 NCBI chr14:100,311,224...100,360,879
Ensembl chr14:100,311,173...100,360,879
JBrowse link
G Rbm15 RNA binding motif protein 15 ISO MGI:MGI:3706995 (MGI:MGI:3833189|PMID:18981216) RGD PMID:18981216 MGI:MGI:3833189 NCBI chr 2:210,079,678...210,090,200
Ensembl chr 2:210,081,770...210,088,949
JBrowse link
G Sema3e semaphorin 3E ISO (MGI:MGI:3526793|PMID:15550623) RGD PMID:15550623 MGI:MGI:3526793 NCBI chr 4:17,314,745...17,594,659
Ensembl chr 4:17,272,511...17,594,598
JBrowse link
G Sema5a semaphorin 5A ISO MGI:MGI:3577050 (MGI:MGI:3575993|PMID:15743826) RGD PMID:15743826 MGI:MGI:3575993 NCBI chr 2:85,377,318...85,808,970
Ensembl chr 2:85,377,318...85,808,970
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO (MGI:MGI:4835126|PMID:19458075) RGD PMID:19458075 MGI:MGI:4835126 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
ISS
IEA
MGI:MGI:1857796 (MGI:MGI:3583396|PMID:15936751)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:15936751 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3583396 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Srf serum response factor ISO (MGI:MGI:3811944|PMID:18804439) RGD PMID:18804439 MGI:MGI:3811944 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Stk4 serine/threonine kinase 4 ISO MGI:MGI:1928487 (MGI:MGI:4412133|PMID:19786569) RGD PMID:19786569 MGI:MGI:4412133 NCBI chr 3:160,467,552...160,546,540
Ensembl chr 3:160,467,552...160,546,540
JBrowse link
G Tbx20 T-box transcription factor 20 ISO MGI:MGI:3579836 (MGI:MGI:3578574|PMID:15843414) RGD PMID:15843414 MGI:MGI:3578574 NCBI chr 8:25,849,394...25,904,570
Ensembl chr 8:25,850,962...25,904,570
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 ISO MGI:MGI:2384513|MGI:MGI:2386570 (MGI:MGI:3703113|PMID:17078885) RGD PMID:17078885 MGI:MGI:3703113 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:MGI:1931047 (MGI:MGI:3710026|PMID:17428830)
(PMID:23083510), (PMID:23688497)
RGD PMID:17428830, PMID:23083510, PMID:23688497 MGI:MGI:3710026 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc1 nuclear factor of activated T-cells 1 ISO MGI:MGI:2181762 (MGI:MGI:3848105|PMID:19233265) RGD PMID:19233265 MGI:MGI:3848105 NCBI chr18:77,203,517...77,322,690
Ensembl chr18:77,203,525...77,322,690
JBrowse link
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034833.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:53,872...54,885 JBrowse link
G AABR07071701.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:126,975,833...126,976,850 JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ISO MGI:MGI:3055737 (MGI:MGI:3054694|PMID:15340078) RGD PMID:15340078 MGI:MGI:3054694 NCBI chr 1:265,100,094...265,270,263
Ensembl chr 1:265,157,379...265,269,837
JBrowse link
G Ccl11 C-C motif chemokine ligand 11 ISO MGI:MGI:2384435 (MGI:MGI:3640884|PMID:10804170) RGD PMID:10804170 MGI:MGI:3640884 NCBI chr10:69,434,965...69,439,566
Ensembl chr10:69,434,941...69,439,575
JBrowse link
G Csf1 colony stimulating factor 1 ISO MGI:MGI:1856333 (MGI:MGI:3640884|PMID:10804170) RGD PMID:10804170 MGI:MGI:3640884 NCBI chr 2:210,522,370...210,550,546
Ensembl chr 2:210,522,375...210,550,560
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 ISO
IEA
MGI:MGI:2388024 (MGI:MGI:1932625|PMID:11283268)
GO_REF:0000107
RGD
Ensembl
PMID:11283268 GO_REF:0000107, MGI:MGI:1932625 NCBI chr20:3,553,430...3,574,959
Ensembl chr20:3,552,929...3,575,780
JBrowse link
G Epha2 Eph receptor A2 ISO (MGI:MGI:5284750|PMID:19321667) RGD PMID:19321667 MGI:MGI:5284750 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206
JBrowse link
G Etv4 ETS variant transcription factor 4 ISO MGI:MGI:2445834 (MGI:MGI:2667785|PMID:12871699), (MGI:MGI:3828920|PMID:18977342) RGD PMID:12871699, PMID:18977342 MGI:MGI:2667785, MGI:MGI:3828920 NCBI chr10:89,685,058...89,700,300
Ensembl chr10:89,685,058...89,700,283
JBrowse link
G Kdm5b lysine demethylase 5B ISO MGI:MGI:4329395 (MGI:MGI:5619178|PMID:24802759) RGD PMID:24802759 MGI:MGI:5619178 NCBI chr13:51,384,371...51,455,392
Ensembl chr13:51,384,389...51,455,357
JBrowse link
G LOC102554748 nidogen-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:380,313...427,615
Ensembl chr 7:380,741...381,732
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO
IBA
MGI:MGI:3663738 (MGI:MGI:3692480|PMID:16973609)
PMID:21873635
RGD PMID:16973609, PMID:21873635 MGI:MGI:3692480, RGD:13792537 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO
IBA
MGI:MGI:2156191 (MGI:MGI:3849913|PMID:19503830)
PMID:21873635
RGD PMID:19503830, PMID:21873635 MGI:MGI:3849913, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Msx2 msh homeobox 2 ISO
IEA
MGI:MGI:1926381 (MGI:MGI:1355063|PMID:10742104)
GO_REF:0000107
RGD
Ensembl
PMID:10742104 GO_REF:0000107, MGI:MGI:1355063 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Pml PML nuclear body scaffold ISO MGI:MGI:2429949 (MGI:MGI:3839212|PMID:19261859) RGD PMID:19261859 MGI:MGI:3839212 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO MGI:MGI:1935144 (MGI:MGI:2180693|PMID:8864124) RGD PMID:8864124 MGI:MGI:2180693 NCBI chr18:52,917,124...52,985,281
Ensembl chr18:52,917,124...52,985,261
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO MGI:MGI:1857247 (MGI:MGI:3589531|PMID:16007215) RGD PMID:16007215 MGI:MGI:3589531 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Tbx3 T-box transcription factor 3 ISO MGI:MGI:2655214 (MGI:MGI:3608166|PMID:16222716) RGD PMID:16222716 MGI:MGI:3608166 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 ISO (MGI:MGI:5504318|PMID:23661704) RGD PMID:23661704 MGI:MGI:5504318 NCBI chr 1:35,067,268...35,200,530
Ensembl chr 1:35,067,490...35,198,939
JBrowse link
G Agt angiotensinogen NOT ISO MGI:MGI:2183545 (MGI:MGI:77583|PMID:8675666)
(MGI:MGI:2655949|PMID:12657564)
RGD PMID:8675666, PMID:12657564 MGI:MGI:2655949, MGI:MGI:77583 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:MGI:97486 (MGI:MGI:3036971|PMID:14699151), (MGI:MGI:3768986|PMID:16672320)
Ensembl
RGD
PMID:14699151, PMID:16672320 GO_REF:0000107, MGI:MGI:3036971, MGI:MGI:3768986 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO
IEA
MGI:MGI:104903 (MGI:MGI:3583399|PMID:15925496)
GO_REF:0000107
RGD
Ensembl
PMID:15925496 GO_REF:0000107, MGI:MGI:3583399 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO
ISS
IEA
MGI:MGI:1344337 (MGI:MGI:3714585|PMID:17522159)
GO_REF:0000024
(PMID:12631064)
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12631064, PMID:17522159 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3714585 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Cd44 CD44 molecule (Indian blood group) ISO (MGI:MGI:2449954|PMID:10926769) RGD PMID:10926769 MGI:MGI:2449954 NCBI chr 3:92,695,083...92,783,820
Ensembl chr 3:92,696,313...92,783,658
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 NOT IMP
ISO
PMID:15843474
(MGI:MGI:3717986|PMID:17615577)
RGD PMID:17615577, PMID:15843474 MGI:MGI:3717986, RGD:8554075 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 NOT ISO (MGI:MGI:3717986|PMID:17615577) RGD PMID:17615577 MGI:MGI:3717986 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
MGI:MGI:1858008 (MGI:MGI:3714576|PMID:17537789)
GO_REF:0000107
RGD
Ensembl
PMID:17537789 GO_REF:0000107, MGI:MGI:3714576 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 ISO MGI:MGI:3045424 (MGI:MGI:3757813|PMID:17803964) RGD PMID:17803964 MGI:MGI:3757813 NCBI chr 5:166,464,170...166,513,030
Ensembl chr 5:166,464,252...166,513,027
JBrowse link
G Dchs1 dachsous cadherin-related 1 ISO MGI:MGI:4867020 (MGI:MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:MGI:4939936 NCBI chr 1:170,594,981...170,629,062
Ensembl chr 1:170,594,822...170,628,915
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 IEA
ISO
GO_REF:0000107
MGI:MGI:2680670|MGI:MGI:3699270|MGI:MGI:3710242 (MGI:MGI:3688770|PMID:16105026), (MGI:MGI:3699022|PMID:17172448), (MGI:MGI:3709697|PMID:17435047)
Ensembl
RGD
PMID:16105026, PMID:17172448, PMID:17435047 GO_REF:0000107, MGI:MGI:3688770, MGI:MGI:3699022, MGI:MGI:3709697 NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895
JBrowse link
G Dspp dentin sialophosphoprotein ISO MGI:MGI:2653208 (MGI:MGI:3686561|PMID:16937369) RGD PMID:16937369 MGI:MGI:3686561 NCBI chr14:6,926,972...6,933,079
Ensembl chr14:6,926,976...6,933,070
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO
IEA
MGI:MGI:102780 (MGI:MGI:2662002|PMID:12783782)
GO_REF:0000107
RGD
Ensembl
PMID:12783782 GO_REF:0000107, MGI:MGI:2662002 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Fat4 FAT atypical cadherin 4 ISO MGI:MGI:3846573 (MGI:MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:MGI:4939936 NCBI chr 2:125,751,818...125,879,398
Ensembl chr 2:125,752,130...125,879,387
JBrowse link
G Fgf2 fibroblast growth factor 2 ISO
ISS
(PMID:12631064)
GO_REF:0000024
RGD
UniProt
PMID:12631064 GO_REF:0000024 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:MGI:2150348 (MGI:MGI:3603080|PMID:16049111) RGD PMID:16049111 MGI:MGI:3603080 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Foxd1 forkhead box D1 ISO (MGI:MGI:2675756|PMID:13678594) RGD PMID:13678594 MGI:MGI:2675756 NCBI chr 2:28,460,068...28,462,488
Ensembl chr 2:28,460,068...28,462,488
JBrowse link
G Gdnf glial cell derived neurotrophic factor IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:2675756|PMID:13678594), (MGI:MGI:4949995|PMID:21281623), (MGI:MGI:81287|PMID:8657307)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8657307, PMID:13678594, PMID:21281623 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2675756, MGI:MGI:4949995, MGI:MGI:81287 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:98297 (MGI:MGI:3611729|PMID:16396903) RGD PMID:16396903 MGI:MGI:3611729 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Gpc3 glypican 3 ISO
IEA
MGI:MGI:88177|MGI:MGI:894293 (MGI:MGI:3583399|PMID:15925496)
GO_REF:0000107
RGD
Ensembl
PMID:15925496 GO_REF:0000107, MGI:MGI:3583399 NCBI chr  X:139,579,268...139,947,093
Ensembl chr  X:139,579,268...139,916,883
JBrowse link
G Greb1l GREB1 like retinoic acid receptor coactivator ISO (MGI:MGI:6094060|PMID:29100091) RGD PMID:29100091 MGI:MGI:6094060 NCBI chr18:1,537,315...1,784,260
Ensembl chr18:1,723,565...1,784,233
JBrowse link
G Gzf1 GDNF-inducible zinc finger protein 1 ISO (MGI:MGI:2683817|PMID:14522971) RGD PMID:14522971 MGI:MGI:2683817 NCBI chr 3:143,003,706...143,015,906
Ensembl chr 3:143,003,796...143,015,904
JBrowse link
G Hoxa11 homeobox A11 ISO MGI:MGI:96203 (MGI:MGI:2135652|PMID:11493536) RGD PMID:11493536 MGI:MGI:2135652 NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503
Ensembl chr 4:82,298,152...82,300,503
JBrowse link
G Hoxd11 homeobox D11 ISO MGI:MGI:96172 (MGI:MGI:2135652|PMID:11493536) RGD PMID:11493536 MGI:MGI:2135652 NCBI chr 3:61,604,256...61,606,874
Ensembl chr 3:61,604,672...61,606,400
JBrowse link
G Ilk integrin-linked kinase ISO (MGI:MGI:3575981|PMID:15831470) RGD PMID:15831470 MGI:MGI:3575981 NCBI chr 1:170,578,941...170,585,192
Ensembl chr 1:170,578,889...170,585,189
JBrowse link
G Lama5 laminin subunit alpha 5 ISO (MGI:MGI:2678847|PMID:14568553) RGD PMID:14568553 MGI:MGI:2678847 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Lhx1 LIM homeobox 1 ISO (PMID:7909549) RGD PMID:7909549 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO
ISS
(MGI:MGI:3830398|PMID:19161241)
GO_REF:0000024
RGD
UniProt
PMID:19161241 GO_REF:0000024, MGI:MGI:3830398 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Npnt nephronectin ISO
IEA
MGI:MGI:3715213 (MGI:MGI:3714574|PMID:17537792)
GO_REF:0000107
RGD
Ensembl
PMID:17537792 GO_REF:0000107, MGI:MGI:3714574 NCBI chr 2:238,001,767...238,068,886
Ensembl chr 2:238,002,990...238,068,694
JBrowse link
G Pax2 paired box 2 ISO
ISS
MGI:MGI:1857114|MGI:MGI:88138 (MGI:MGI:3768986|PMID:16672320)
GO_REF:0000024
(PMID:1337742)
RGD
UniProt
PMID:1337742, PMID:16672320 GO_REF:0000024, MGI:MGI:3768986 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO (PMID:1337742) RGD PMID:1337742 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Pbx1 PBX homeobox 1 ISO (MGI:MGI:2451200|PMID:12591246) RGD PMID:12591246 MGI:MGI:2451200 NCBI chr13:86,390,741...86,671,460
Ensembl chr13:86,390,741...86,451,002
JBrowse link
G Pgf placental growth factor ISO (MGI:MGI:2675756|PMID:13678594) RGD PMID:13678594 MGI:MGI:2675756 NCBI chr 6:108,994,016...109,004,598
Ensembl chr 6:108,994,018...109,004,598
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link
G Pspn persephin ISO (MGI:MGI:1196665|PMID:9491986) RGD PMID:9491986 MGI:MGI:1196665 NCBI chr 9:10,044,756...10,045,314
Ensembl chr 9:10,044,756...10,045,314
JBrowse link
G Ptch1 patched 1 ISO MGI:MGI:1857447 (MGI:MGI:4367286|PMID:19809516) RGD PMID:19809516 MGI:MGI:4367286 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO (MGI:MGI:2447943|PMID:12482961) RGD PMID:12482961 MGI:MGI:2447943 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
ISS
IEA
MGI:MGI:1857796 (MGI:MGI:3611729|PMID:16396903)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:16396903 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3611729 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:MGI:109344 (MGI:MGI:2662002|PMID:12783782) RGD PMID:12783782 MGI:MGI:2662002 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Smad4 SMAD family member 4 ISO
IEA
MGI:MGI:104903|MGI:MGI:88177 (MGI:MGI:3583399|PMID:15925496)
GO_REF:0000107
RGD
Ensembl
PMID:15925496 GO_REF:0000107, MGI:MGI:3583399 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (PMID:8787755) RGD PMID:8787755 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tcf21 transcription factor 21 ISS
ISO
GO_REF:0000024
MGI:MGI:2148207 (MGI:MGI:1202620|PMID:9507058), (MGI:MGI:1347485|PMID:10572052)
UniProt
RGD
PMID:9507058, PMID:10572052 GO_REF:0000024, MGI:MGI:1202620, MGI:MGI:1347485 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
G Timeless timeless circadian regulator IMP RGD PMID:10963667 RGD:2308864 NCBI chr 7:2,643,288...2,667,329
Ensembl chr 7:2,643,288...2,667,628
JBrowse link
G Wnt1 Wnt family member 1 ISO MGI:MGI:1197020 (MGI:MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:MGI:3588895 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
G Wnt4 Wnt family member 4 ISO
IEA
(MGI:MGI:3588895|PMID:16054034)
GO_REF:0000107
RGD
Ensembl
PMID:16054034 GO_REF:0000107, MGI:MGI:3588895 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
G Wnt6 Wnt family member 6 ISO UniProtKB:P22724 (MGI:MGI:2178881|PMID:11948913) RGD PMID:11948913 MGI:MGI:2178881 NCBI chr 9:82,033,543...82,047,172
Ensembl chr 9:82,033,543...82,047,166
JBrowse link
G Wnt9b Wnt family member 9B ISO MGI:MGI:3526437|MGI:MGI:98953 (MGI:MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:MGI:3588895 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
G Wt1 WT1 transcription factor ISO
IEA
ISS
UniProtKB:P22561 (PMID:10101119)
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:1333093|PMID:10101119)
RGD
Ensembl
UniProt
PMID:10101119 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1333093 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link
branching morphogenesis of an epithelial tube term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 beta-1,4-galactosyltransferase 1 ISO MGI:MGI:2178779|MGI:MGI:2450889 (MGI:MGI:2178150|PMID:11900463), (MGI:MGI:3052392|PMID:15282149) RGD PMID:11900463, PMID:15282149 MGI:MGI:2178150, MGI:MGI:3052392 NCBI chr 5:57,121,768...57,168,610
Ensembl chr 5:57,121,769...57,168,610
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO
ISS
(PMID:10706139)
GO_REF:0000024
RGD
UniProt
PMID:10706139 GO_REF:0000024 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (MGI:MGI:3575981|PMID:15831470) RGD PMID:15831470 MGI:MGI:3575981 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Casr calcium-sensing receptor IMP positive regulation RGD PMID:20117086 RGD:7206840 NCBI chr11:67,188,204...67,262,261
Ensembl chr11:67,188,630...67,258,771
JBrowse link
G Clic4 chloride intracellular channel 4 ISO
IEA
MGI:MGI:3838012 (MGI:MGI:3837628|PMID:19197003)
GO_REF:0000107
RGD
Ensembl
PMID:19197003 GO_REF:0000107, MGI:MGI:3837628 NCBI chr 5:153,568,937...153,625,669
Ensembl chr 5:153,568,745...153,625,869
JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO MGI:MGI:3053959|MGI:MGI:3589209 (MGI:MGI:3617296|PMID:16452165) RGD PMID:16452165 MGI:MGI:3617296 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Egf epidermal growth factor ISO (MGI:MGI:3575981|PMID:15831470) RGD PMID:15831470 MGI:MGI:3575981 NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Fgf10 fibroblast growth factor 10 ISO (PMID:17959718) RGD PMID:17959718 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Gdf7 growth differentiation factor 7 ISO MGI:MGI:2387817 (MGI:MGI:1934988|PMID:11356025) RGD PMID:11356025 MGI:MGI:1934988 NCBI chr 6:33,496,596...33,507,626
Ensembl chr 6:33,503,217...33,507,542
JBrowse link
G Gli2 GLI family zinc finger 2 ISO MGI:MGI:1857509 (MGI:MGI:1277743|PMID:9731531) RGD PMID:9731531 MGI:MGI:1277743 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:1856276 (MGI:MGI:3608164|PMID:16247775) RGD PMID:16247775 MGI:MGI:3608164 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:MGI:4430439 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Igf1 insulin-like growth factor 1 ISO MGI:MGI:1861704 (MGI:MGI:3616136|PMID:15059953) RGD PMID:15059953 MGI:MGI:3616136 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Kdr kinase insert domain receptor ISO (MGI:MGI:3613102|PMID:16375885) RGD PMID:16375885 MGI:MGI:3613102 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Lama5 laminin subunit alpha 5 ISO (MGI:MGI:2678847|PMID:14568553) RGD PMID:14568553 MGI:MGI:2678847 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IEA
ISO
GO_REF:0000107
(PMID:16153003)
Ensembl
RGD
PMID:16153003 GO_REF:0000107 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Mgp matrix Gla protein IMP fetal lung RGD PMID:15136295 RGD:1582506 NCBI chr 4:170,856,783...170,860,105
Ensembl chr 4:170,856,751...170,860,225
JBrowse link
G Mks1 MKS transition zone complex subunit 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:4441259|PMID:17185389)
Ensembl
RGD
PMID:17185389 GO_REF:0000107, MGI:MGI:4441259 NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO MGI:MGI:2386246 (MGI:MGI:3527919|PMID:15572153) RGD PMID:15572153 MGI:MGI:3527919 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor ISO
IEA
MGI:MGI:2388717|MGI:MGI:3574949 (MGI:MGI:3574742|PMID:15716345)
GO_REF:0000107
RGD
Ensembl
PMID:15716345 GO_REF:0000107, MGI:MGI:3574742 NCBI chr 6:38,222,554...38,228,419
Ensembl chr 6:38,222,555...38,228,379
JBrowse link
G Nkx3-1 NK3 homeobox 1 ISO
ISS
MGI:MGI:1928655 (MGI:MGI:1891543|PMID:11002344)
GO_REF:0000024
RGD
UniProt
PMID:11002344 GO_REF:0000024, MGI:MGI:1891543 NCBI chr15:51,065,316...51,067,908
Ensembl chr15:51,065,316...51,068,421
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:3529381|PMID:15064243) RGD PMID:15064243 MGI:MGI:3529381 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO
ISS
(PMID:20457839)
GO_REF:0000024
RGD
UniProt
PMID:20457839 GO_REF:0000024 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (PMID:12482949)
(MGI:MGI:5603942|PMID:24939912)
RGD PMID:12482949, PMID:24939912 MGI:MGI:5603942 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO (MGI:MGI:3039057|PMID:15042703) RGD PMID:15042703 MGI:MGI:3039057 NCBI chr 1:219,439,953...219,443,570
Ensembl chr 1:219,439,953...219,443,570
JBrowse link
G Pxn paxillin ISO (MGI:MGI:2680875|PMID:14636584) RGD PMID:14636584 MGI:MGI:2680875 NCBI chr12:46,797,953...46,845,107
Ensembl chr12:46,797,954...46,845,080
JBrowse link
G Rasip1 Ras interacting protein 1 ISO (MGI:MGI:5052000|PMID:21396893) RGD PMID:21396893 MGI:MGI:5052000 NCBI chr 1:101,609,209...101,621,648
Ensembl chr 1:101,610,773...101,621,646
JBrowse link
G Sema5a semaphorin 5A ISO MGI:MGI:3577050 (MGI:MGI:3575993|PMID:15743826) RGD PMID:15743826 MGI:MGI:3575993 NCBI chr 2:85,377,318...85,808,970
Ensembl chr 2:85,377,318...85,808,970
JBrowse link
G Shh sonic hedgehog signaling molecule ISS
ISO
GO_REF:0000024
MGI:MGI:1857796|MGI:MGI:1934261|MGI:MGI:1934268|MGI:MGI:2679524 (MGI:MGI:1289788|PMID:9768363), (MGI:MGI:3039063|PMID:15042696), (MGI:MGI:3050270|PMID:15305287)
UniProt
RGD
PMID:9768363, PMID:15042696, PMID:15305287 GO_REF:0000024, MGI:MGI:1289788, MGI:MGI:3039063, MGI:MGI:3050270 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Slit2 slit guidance ligand 2 IEA
ISO
GO_REF:0000107
(PMID:18345009), (PMID:19005219)
Ensembl
RGD
PMID:18345009, PMID:19005219 GO_REF:0000107 NCBI chr14:66,831,848...67,171,491
Ensembl chr14:66,831,848...67,170,361
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 ISO (MGI:MGI:1331548|PMID:10074434) RGD PMID:10074434 MGI:MGI:1331548 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
G Timeless timeless circadian regulator ISO
IEA
(MGI:MGI:2675515|PMID:12950082)
GO_REF:0000107
RGD
Ensembl
PMID:12950082 GO_REF:0000107, MGI:MGI:2675515 NCBI chr 7:2,643,288...2,667,329
Ensembl chr 7:2,643,288...2,667,628
JBrowse link
G Tmem67 transmembrane protein 67 ISO (MGI:MGI:4441259|PMID:17185389) RGD PMID:17185389 MGI:MGI:4441259 NCBI chr 5:25,666,138...25,721,056
Ensembl chr 5:25,666,137...25,721,072
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:MGI:3613102|PMID:16375885) RGD PMID:16375885 MGI:MGI:3613102 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Wnt4 Wnt family member 4 ISO UniProtKB:P22727 (MGI:MGI:2178881|PMID:11948913) RGD PMID:11948913 MGI:MGI:2178881 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
G Wnt9b Wnt family member 9B ISO MGI:MGI:3526437 (MGI:MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:MGI:3588895 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
IEA
(PMID:8674409)
GO_REF:0000107
RGD
Ensembl
PMID:8674409 GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
IEA
(MGI:MGI:3788965|PMID:18367557)
GO_REF:0000107
RGD
Ensembl
PMID:18367557 GO_REF:0000107, MGI:MGI:3788965 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1345138|MGI:MGI:1345139 (MGI:MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:MGI:5052190 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:3629660 (MGI:MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:MGI:3688953 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 ISO MGI:MGI:1099809|MGI:MGI:1345138 (MGI:MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:MGI:5052190 NCBI chr 2:124,400,689...124,405,331
Ensembl chr 2:124,400,679...124,405,331
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 ISO MGI:MGI:1099809|MGI:MGI:1345139 (MGI:MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:MGI:5052190 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO MGI:MGI:3053959|MGI:MGI:5316446 (MGI:MGI:5586932|PMID:25043473) RGD PMID:25043473 MGI:MGI:5586932 NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO (PMID:9740653) RGD PMID:9740653 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
IEA
MGI:MGI:1857796 (MGI:MGI:1277744|PMID:9731532)
GO_REF:0000107
RGD
Ensembl
PMID:9731532 GO_REF:0000107, MGI:MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 ISO MGI:MGI:4124060 (MGI:MGI:5300435|PMID:21956870) RGD PMID:21956870 MGI:MGI:5300435 NCBI chr 7:40,171,957...40,217,056
Ensembl chr 7:40,171,963...40,217,056
JBrowse link
G Tnc tenascin C IMP RGD PMID:16928692 RGD:4889612 NCBI chr 5:79,789,686...79,874,555
Ensembl chr 5:79,789,671...79,874,671
JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsh cathepsin H ISO
ISS
(MGI:MGI:3722010|PMID:17500053)
GO_REF:0000024
RGD
UniProt
PMID:17500053 GO_REF:0000024, MGI:MGI:3722010 NCBI chr 8:97,439,155...97,458,293
Ensembl chr 8:97,439,161...97,458,287
JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin ISO MGI:MGI:2176531 (MGI:MGI:3703920|PMID:17369357) RGD PMID:17369357 MGI:MGI:3703920 NCBI chr14:18,521,921...18,531,179
Ensembl chr14:18,521,930...18,531,179
JBrowse link
G Tfap2c transcription factor AP-2 gamma ISO MGI:MGI:3040993 (MGI:MGI:4422106|PMID:20131354) RGD PMID:20131354 MGI:MGI:4422106 NCBI chr 3:170,550,314...170,558,197
Ensembl chr 3:170,550,314...170,558,194
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3525902|PMID:15634693)
Ensembl
UniProt
RGD
PMID:15634693 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3525902 NCBI chr 2:28,460,068...28,462,488
Ensembl chr 2:28,460,068...28,462,488
JBrowse link
distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klhl3 kelch-like family member 3 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22406640), (PMID:23453970), (PMID:23576762)
UniProt
Ensembl
RGD
PMID:22406640, PMID:23453970, PMID:23576762 GO_REF:0000024, GO_REF:0000107 NCBI chr17:6,924,423...7,029,374
Ensembl chr17:6,935,860...7,029,240
JBrowse link
G Wnk4 WNK lysine deficient protein kinase 4 ISS
ISO
GO_REF:0000024
(PMID:23453970), (PMID:23576762)
UniProt
RGD
PMID:23453970, PMID:23576762 GO_REF:0000024 NCBI chr10:89,181,139...89,198,213
Ensembl chr10:89,181,165...89,198,213
JBrowse link
embryonic epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ret ret proto-oncogene ISO MGI:MGI:1930016 (MGI:MGI:3513229|PMID:15569713) RGD PMID:15569713 MGI:MGI:3513229 NCBI chr 4:150,202,170...150,249,196
Ensembl chr 4:150,202,058...150,244,372
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 ISO
IEA
MGI:MGI:97902 (MGI:MGI:3513229|PMID:15569713)
GO_REF:0000107
RGD
Ensembl
PMID:15569713 GO_REF:0000107, MGI:MGI:3513229 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
G Wnt4 Wnt family member 4 ISO
IEA
(MGI:MGI:3624584|PMID:16546160)
GO_REF:0000107
RGD
Ensembl
PMID:16546160 GO_REF:0000107, MGI:MGI:3624584 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
embryonic heart tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hand1 heart and neural crest derivatives expressed 1 ISO (MGI:MGI:1927045|PMID:11076684) RGD PMID:11076684 MGI:MGI:1927045 NCBI chr10:43,250,729...43,253,296
Ensembl chr10:43,250,745...43,253,296
JBrowse link
embryonic heart tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO
IEA
(PMID:19506109)
GO_REF:0000107
RGD
Ensembl
PMID:19506109 GO_REF:0000107 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO
IEA
(MGI:MGI:4354447|PMID:19609448)
GO_REF:0000107
RGD
Ensembl
PMID:19609448 GO_REF:0000107, MGI:MGI:4354447 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Megf8 multiple EGF-like-domains 8 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5551355|PMID:24052814)
Ensembl
UniProt
RGD
PMID:24052814 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5551355 NCBI chr 1:82,184,671...82,234,045
Ensembl chr 1:82,185,034...82,234,045
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 ISO (MGI:MGI:1339460|PMID:10393122) RGD PMID:10393122 MGI:MGI:1339460 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
JBrowse link
G Ryr2 ryanodine receptor 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:1267127|PMID:9628868)
Ensembl
UniProt
RGD
PMID:9628868 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1267127 NCBI chr17:65,533,998...65,955,606
Ensembl chr17:65,535,403...65,955,606
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO (MGI:MGI:4946573|PMID:21305474) RGD PMID:21305474 MGI:MGI:4946573 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
G Tbx20 T-box transcription factor 20 ISO (MGI:MGI:3579960|PMID:15901664) RGD PMID:15901664 MGI:MGI:3579960 NCBI chr 8:25,849,394...25,904,570
Ensembl chr 8:25,850,962...25,904,570
JBrowse link
G Tead1 TEA domain transcription factor 1 ISO MGI:MGI:103262|MGI:MGI:104904 (MGI:MGI:3773640|PMID:18332127) RGD PMID:18332127 MGI:MGI:3773640 NCBI chr 1:177,495,500...177,714,795
Ensembl chr 1:177,495,782...177,707,061
JBrowse link
G Tead2 TEA domain transcription factor 2 ISO MGI:MGI:101876|MGI:MGI:103262 (MGI:MGI:3773640|PMID:18332127) RGD PMID:18332127 MGI:MGI:3773640 NCBI chr 1:101,213,782...101,230,483
Ensembl chr 1:101,213,788...101,230,477
JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO MGI:MGI:101876|MGI:MGI:104904 (MGI:MGI:3773640|PMID:18332127) RGD PMID:18332127 MGI:MGI:3773640 NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
JBrowse link
endothelial tube lumen extension term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rhoa ras homolog family member A ISO UniProtKB:Q9Y3M8 (PMID:20208559) RGD PMID:20208559 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Stard13 StAR-related lipid transfer domain containing 13 ISO UniProtKB:P61586 (PMID:20208559) RGD PMID:20208559 NCBI chr12:1,023,494...1,418,919
Ensembl chr12:1,023,531...1,195,591
JBrowse link
endothelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 ISO (PMID:19592636) RGD PMID:19592636 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Bsg basigin (Ok blood group) ISO
ISS
(PMID:19837976)
GO_REF:0000024
RGD
UniProt
PMID:19837976 GO_REF:0000024 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753
JBrowse link
G Ccm2 CCM2 scaffold protein ISO (PMID:19151727) RGD PMID:19151727 NCBI chr14:86,812,728...86,859,408
Ensembl chr14:86,813,082...86,859,406
JBrowse link
G Csnk2b casein kinase 2 beta ISO (PMID:19592636) RGD PMID:19592636 NCBI chr20:5,108,692...5,113,675
Ensembl chr20:5,106,890...5,113,112
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
ISS
(PMID:20123964)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20123964 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:24955809 RGD:11352686 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Rhob ras homolog family member B ISO (PMID:21347332) RGD PMID:21347332 NCBI chr 6:33,689,127...33,691,301
Ensembl chr 6:33,689,127...33,691,301
JBrowse link
epithelial cell proliferation involved in mammary gland duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin ISO MGI:MGI:2176531 (MGI:MGI:3703920|PMID:17369357) RGD PMID:17369357 MGI:MGI:3703920 NCBI chr14:18,521,921...18,531,179
Ensembl chr14:18,521,930...18,531,179
JBrowse link
G Esr1 estrogen receptor 1 ISO
IEA
MGI:MGI:2150897 (MGI:MGI:3629536|PMID:12021201)
GO_REF:0000107
RGD
Ensembl
PMID:12021201 GO_REF:0000107, MGI:MGI:3629536 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:MGI:3511276 (MGI:MGI:3576991|PMID:15647257) RGD PMID:15647257 MGI:MGI:3576991 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Tfap2c transcription factor AP-2 gamma ISO MGI:MGI:3040993 (MGI:MGI:4422106|PMID:20131354) RGD PMID:20131354 MGI:MGI:4422106 NCBI chr 3:170,550,314...170,558,197
Ensembl chr 3:170,550,314...170,558,194
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
(MGI:MGI:3761053|PMID:17898001)
GO_REF:0000107
RGD
Ensembl
PMID:17898001 GO_REF:0000107, MGI:MGI:3761053 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
epithelial cell proliferation involved in renal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 ISO MGI:MGI:1341817 (MGI:MGI:5581372|PMID:24680895) RGD PMID:24680895 MGI:MGI:5581372 NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
JBrowse link
G Lgr5 leucine rich repeat containing G protein coupled receptor 5 ISO MGI:MGI:1891468 (MGI:MGI:5581372|PMID:24680895) RGD PMID:24680895 MGI:MGI:5581372 NCBI chr 7:58,447,097...58,587,787
Ensembl chr 7:58,448,277...58,587,787
JBrowse link
G Mef2c myocyte enhancer factor 2C IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:4440396|PMID:20181743)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20181743 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4440396 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 ISO
ISS
(MGI:MGI:4440396|PMID:20181743)
GO_REF:0000024
RGD
UniProt
PMID:20181743 GO_REF:0000024, MGI:MGI:4440396 NCBI chr 7:98,820,799...98,960,878
Ensembl chr 7:98,820,812...98,960,837
JBrowse link
epithelial tube branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEP
ISO
(PMID:8674409) RGD PMID:8674409, PMID:8769111 RGD:2306315 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
MGI:MGI:2148567 (MGI:MGI:3773938|PMID:18231602)
GO_REF:0000107
RGD
Ensembl
PMID:18231602 GO_REF:0000107, MGI:MGI:3773938 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctsd cathepsin D NOT ISO (MGI:MGI:3722010|PMID:17500053) RGD PMID:17500053 MGI:MGI:3722010 NCBI chr 1:215,541,570...215,553,446
Ensembl chr 1:215,541,542...215,553,451
JBrowse link
G Ctsl cathepsin L NOT ISO (MGI:MGI:3722010|PMID:17500053) RGD PMID:17500053 MGI:MGI:3722010 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Ctsz cathepsin Z ISO (PMID:17500053) RGD PMID:17500053 NCBI chr 3:172,527,107...172,537,877
Ensembl chr 3:172,527,107...172,537,877
JBrowse link
G Dag1 dystroglycan 1 ISO (MGI:MGI:2156962|PMID:11798066) RGD PMID:11798066 MGI:MGI:2156962 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 ISO MGI:MGI:3757646 (MGI:MGI:5487693|PMID:23466739) RGD PMID:23466739 MGI:MGI:5487693 NCBI chr15:120,213...230,312
Ensembl chr15:120,372...228,977
JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 ISO MGI:MGI:1924661 (MGI:MGI:5699497|PMID:26371508) RGD PMID:26371508 MGI:MGI:5699497 NCBI chr 5:24,576,988...24,631,758
Ensembl chr 5:24,576,991...24,631,698
JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 ISO
IEA
MGI:MGI:1917326 (MGI:MGI:5699497|PMID:26371508)
GO_REF:0000107
RGD
Ensembl
PMID:26371508 GO_REF:0000107, MGI:MGI:5699497 NCBI chr19:38,113,412...38,120,578
Ensembl chr19:38,113,412...38,120,578
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:5912649|PMID:28859094) RGD PMID:28859094 MGI:MGI:5912649 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1859647|MGI:MGI:1927833|MGI:MGI:3629660 (MGI:MGI:1101385|PMID:9428423), (MGI:MGI:1309706|PMID:9784490), (MGI:MGI:1327513|PMID:9916808), (MGI:MGI:3578606|PMID:15800000), (MGI:MGI:3609523|PMID:16169547), (MGI:MGI:3613102|PMID:16375885), (MGI:MGI:3716020|PMID:17560563) RGD PMID:9428423, PMID:9784490, PMID:9916808, PMID:15800000, PMID:16169547, PMID:16375885, PMID:17560563 MGI:MGI:1101385, MGI:MGI:1309706, MGI:MGI:1327513, MGI:MGI:3578606, MGI:MGI:3609523, MGI:MGI:3613102, MGI:MGI:3716020 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:3044679 (MGI:MGI:5523405|PMID:24058167) RGD PMID:24058167 MGI:MGI:5523405 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Foxa1 forkhead box A1 ISO
IEA
MGI:MGI:1347476 (MGI:MGI:3579763|PMID:15668254)
GO_REF:0000107
RGD
Ensembl
PMID:15668254 GO_REF:0000107, MGI:MGI:3579763 NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
JBrowse link
G Foxa2 forkhead box A2 ISO MGI:MGI:1347472 (MGI:MGI:3579763|PMID:15668254) RGD PMID:15668254 MGI:MGI:3579763 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Foxf1 forkhead box F1 ISO MGI:MGI:1929432 (MGI:MGI:2135612|PMID:11493558) RGD PMID:11493558 MGI:MGI:2135612 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Hhip Hedgehog-interacting protein ISO MGI:MGI:2450891 (MGI:MGI:2450020|PMID:12569124) RGD PMID:12569124 MGI:MGI:2450020 NCBI chr19:31,525,134...31,614,487
Ensembl chr19:31,524,671...31,614,246
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO (MGI:MGI:5638831|PMID:24661562) RGD PMID:24661562 MGI:MGI:5638831 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Hoxa5 homeo box A5 ISO MGI:MGI:2150397 (MGI:MGI:1195049|PMID:9441679) RGD PMID:9441679 MGI:MGI:1195049
G Kras KRAS proto-oncogene, GTPase ISO MGI:MGI:98371 (MGI:MGI:5523405|PMID:24058167) RGD PMID:24058167 MGI:MGI:5523405 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Lama1 laminin subunit alpha 1 ISO (MGI:MGI:2156962|PMID:11798066), (MGI:MGI:80991|PMID:1907584) RGD PMID:1907584, PMID:11798066 MGI:MGI:2156962, MGI:MGI:80991 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Nkx2-1 NK2 homeobox 1 IEA
ISO
GO_REF:0000107
(PMID:8675988)
Ensembl
RGD
PMID:8675988 GO_REF:0000107 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Rspo2 R-spondin 2 ISO MGI:MGI:3045965 (MGI:MGI:3774879|PMID:18256198) RGD PMID:18256198 MGI:MGI:3774879 NCBI chr 7:81,919,911...82,059,659
Ensembl chr 7:81,924,050...82,059,789
JBrowse link
G Shh sonic hedgehog signaling molecule IEP
ISO
MGI:MGI:1857796 (MGI:MGI:1277744|PMID:9731532), (MGI:MGI:1346236|PMID:10500184) RGD PMID:9731532, PMID:10500184, PMID:8769111 MGI:MGI:1277744, MGI:MGI:1346236, RGD:2306315 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (MGI:MGI:3795352|PMID:18374910) RGD PMID:18374910 MGI:MGI:3795352 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:MGI:2385468|MGI:MGI:96680 (MGI:MGI:5523405|PMID:24058167) RGD PMID:24058167 MGI:MGI:5523405 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
epithelial tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Podxl podocalyxin-like ISS
ISO
GO_REF:0000024
(PMID:15814834)
UniProt
RGD
PMID:15814834 GO_REF:0000024 NCBI chr 4:58,829,049...58,893,353
Ensembl chr 4:58,829,060...58,893,170
JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 ISO MGI:MGI:1915838 (MGI:MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:MGI:3814781 NCBI chr 7:77,966,722...77,977,004
Ensembl chr 7:77,966,722...77,977,004
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:1857642 (MGI:MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:MGI:3814781 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030901.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:108,387,789...108,393,442 JBrowse link
G Ahi1 Abelson helper integration site 1 ISO
ISS
UniProtKB:F8W3V6 (MGI:MGI:5306539|PMID:21959375)
GO_REF:0000024
RGD
UniProt
PMID:21959375 GO_REF:0000024, MGI:MGI:5306539 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769
JBrowse link
G Arl13b ADP-ribosylation factor like GTPase 13B ISO MGI:MGI:3578151 (MGI:MGI:5430243|PMID:22554696) RGD PMID:22554696 MGI:MGI:5430243 NCBI chr 7:1,122,567...1,188,209
Ensembl chr 7:1,122,567...1,188,209
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator ISO (MGI:MGI:3821640|PMID:19004860) RGD PMID:19004860 MGI:MGI:3821640 NCBI chr 1:165,382,279...165,480,088
Ensembl chr 1:165,382,690...165,479,655
JBrowse link
G Ccdc103 coiled-coil domain containing 103 ISO (PMID:22581229) RGD PMID:22581229 NCBI chr10:90,984,213...90,987,829
Ensembl chr10:90,984,227...90,987,823
JBrowse link
G Ccdc39 coiled-coil domain containing 39 ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:120,278,605...120,367,829
Ensembl chr 2:120,278,605...120,316,600
JBrowse link
G Ccdc40 coiled-coil domain containing 40 ISO
IBA
(PMID:22693285)
PMID:21873635
RGD PMID:22693285, PMID:21873635 RGD:13792537 NCBI chr10:108,055,270...108,393,408
Ensembl chr10:108,340,240...108,372,862
JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 ISO MGI:MGI:2179530 (MGI:MGI:1346729|PMID:10521397) RGD PMID:10521397 MGI:MGI:1346729 NCBI chr 9:41,045,352...41,051,979
Ensembl chr 9:41,045,363...41,052,024
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO MGI:MGI:2176158 (MGI:MGI:3574743|PMID:15750185) RGD PMID:15750185 MGI:MGI:3574743 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Cluap1 clusterin associated protein 1 ISO MGI:MGI:5523142 (MGI:MGI:5509110|PMID:23742838) RGD PMID:23742838 MGI:MGI:5509110 NCBI chr10:11,847,058...11,878,792
Ensembl chr10:11,847,102...11,878,792
JBrowse link
G Dll1 delta like canonical Notch ligand 1 ISO
IEA
(MGI:MGI:2661305|PMID:12730124)
GO_REF:0000107
RGD
Ensembl
PMID:12730124 GO_REF:0000107, MGI:MGI:2661305 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 IEA
ISO
GO_REF:0000107
(PMID:19944400), (PMID:19944405)
Ensembl
RGD
PMID:19944400, PMID:19944405 GO_REF:0000107 NCBI chr19:52,217,427...52,245,930
Ensembl chr19:52,217,984...52,245,929
JBrowse link
G Eng endoglin ISO (MGI:MGI:1337912|PMID:10348742), (MGI:MGI:4368063|PMID:19703439) RGD PMID:10348742, PMID:19703439 MGI:MGI:1337912, MGI:MGI:4368063 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Eomes eomesodermin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:MGI:1857843 (MGI:MGI:1340887|PMID:10411502) RGD PMID:10411502 MGI:MGI:1340887 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Folr1 folate receptor alpha ISO (MGI:MGI:3721767|PMID:17286298) RGD PMID:17286298 MGI:MGI:3721767 NCBI chr 1:166,934,457...166,945,864
Ensembl chr 1:166,934,460...166,943,592
JBrowse link
G Foxh1 forkhead box H1 ISO (MGI:MGI:3055632|PMID:15363409) RGD PMID:15363409 MGI:MGI:3055632 NCBI chr 7:117,730,307...117,733,076
Ensembl chr 7:117,730,307...117,732,387
JBrowse link
G Gata4 GATA binding protein 4 ISO (MGI:MGI:3052615|PMID:15310850) RGD PMID:15310850 MGI:MGI:3052615 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
G Gja1 gap junction protein, alpha 1 ISO MGI:MGI:1857177 (MGI:MGI:1201220|PMID:9486664) RGD PMID:9486664 MGI:MGI:1201220 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 ISO MGI:MGI:2153823 (MGI:MGI:1197800|PMID:9500551) RGD PMID:9500551 MGI:MGI:1197800 NCBI chr10:43,250,729...43,253,296
Ensembl chr10:43,250,745...43,253,296
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 ISO
IEA
MGI:MGI:1857639 (MGI:MGI:892134|PMID:9171826)
GO_REF:0000107
RGD
Ensembl
PMID:9171826 GO_REF:0000107, MGI:MGI:892134 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO
IEA
MGI:MGI:2179429 (MGI:MGI:3607736|PMID:14659802)
GO_REF:0000107
RGD
Ensembl
PMID:14659802 GO_REF:0000107, MGI:MGI:3607736 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Ift172 intraflagellar transport 172 ISO MGI:MGI:3829198 (MGI:MGI:3828200|PMID:18930042) RGD PMID:18930042 MGI:MGI:3828200 NCBI chr 6:26,390,686...26,485,459 JBrowse link
G Ift52 intraflagellar transport 52 ISO (MGI:MGI:3579954|PMID:15930098) RGD PMID:15930098 MGI:MGI:3579954 NCBI chr 3:159,388,868...159,413,358
Ensembl chr 3:159,392,193...159,413,575
JBrowse link
G Ift57 intraflagellar transport 57 ISO MGI:MGI:3707373 (MGI:MGI:3703110|PMID:17027958) RGD PMID:17027958 MGI:MGI:3703110 NCBI chr11:53,664,638...53,731,779
Ensembl chr11:53,664,638...53,731,779
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO (MGI:MGI:5142377|PMID:11517919) RGD PMID:11517919 MGI:MGI:5142377 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Kdm2a lysine demethylase 2A ISO (MGI:MGI:5615026|PMID:25463925) RGD PMID:25463925 MGI:MGI:5615026 NCBI chr 1:219,566,130...219,642,294
Ensembl chr 1:219,566,156...219,640,294
JBrowse link
G Kif3a kinesin family member 3a ISO MGI:MGI:2181727 (MGI:MGI:1337724|PMID:10330409) RGD PMID:10330409 MGI:MGI:1337724 NCBI chr10:38,918,705...38,953,958
Ensembl chr10:38,918,748...38,952,785
JBrowse link
G Lbx1 ladybird homeobox 1 ISO MGI:MGI:2386948 (MGI:MGI:3628723|PMID:12522123) RGD PMID:12522123 MGI:MGI:3628723 NCBI chr 1:264,973,315...264,975,132
Ensembl chr 1:264,973,315...264,975,132
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO MGI:MGI:98958 (MGI:MGI:4413372|PMID:19795512) RGD PMID:19795512 MGI:MGI:4413372 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Mef2c myocyte enhancer factor 2C IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3830899|PMID:16680724)
Ensembl
UniProt
RGD
PMID:16680724 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3830899 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 ISO (MGI:MGI:1339460|PMID:10393122) RGD PMID:10393122 MGI:MGI:1339460 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
JBrowse link
G Mib1 mindbomb E3 ubiquitin protein ligase 1 ISO MGI:MGI:3603514 (MGI:MGI:3603078|PMID:16000382) RGD PMID:16000382 MGI:MGI:3603078 NCBI chr18:1,970,914...2,094,920
Ensembl chr18:1,970,914...2,094,920
JBrowse link
G Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:177,048,607...177,173,729
Ensembl chr 1:177,048,655...177,173,995
JBrowse link
G Nkx2-5 NK2 homeobox 5 IEA
ISO
GO_REF:0000107
MGI:MGI:1927227 (MGI:MGI:3773736|PMID:16510504), (MGI:MGI:74918|PMID:7628699), (MGI:MGI:892786|PMID:9192865)
Ensembl
RGD
PMID:7628699, PMID:9192865, PMID:16510504 GO_REF:0000107, MGI:MGI:3773736, MGI:MGI:74918, MGI:MGI:892786 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
G Nodal nodal growth differentiation factor ISO MGI:MGI:106676 (MGI:MGI:3624254|PMID:16496285) RGD PMID:16496285 MGI:MGI:3624254 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Notch1 notch receptor 1 ISO UniProtKB:O35516 (MGI:MGI:2661305|PMID:12730124) RGD PMID:12730124 MGI:MGI:2661305 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Notch2 notch receptor 2 ISO
IEA
UniProtKB:Q01705 (MGI:MGI:2661305|PMID:12730124)
GO_REF:0000107
RGD
Ensembl
PMID:12730124 GO_REF:0000107, MGI:MGI:2661305 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Noto notochord homeobox ISO MGI:MGI:3053092 (MGI:MGI:5646191|PMID:17884984) RGD PMID:17884984 MGI:MGI:5646191 NCBI chr 4:117,206,355...117,210,856
Ensembl chr 4:117,206,355...117,210,856
JBrowse link
G Nphp3 nephrocystin 3 ISO (PMID:18371931), (PMID:20007846) RGD PMID:18371931, PMID:20007846 NCBI chr 8:112,526,553...112,575,745
Ensembl chr 8:112,526,553...112,575,745
JBrowse link
G Ovol2 ovo-like zinc finger 2 ISO MGI:MGI:3777011 (MGI:MGI:3776202|PMID:17573777) RGD PMID:17573777 MGI:MGI:3776202 NCBI chr 3:138,433,990...138,464,511
Ensembl chr 3:138,433,990...138,462,063
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:21719175) RGD PMID:21719175 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link
G Psen1 presenilin 1 ISO MGI:MGI:109284 (MGI:MGI:1347695|PMID:10557208) RGD PMID:10557208 MGI:MGI:1347695 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
MGI:MGI:1857796 (MGI:MGI:1340887|PMID:10411502), (MGI:MGI:1346236|PMID:10500184), (MGI:MGI:5142377|PMID:11517919)
Ensembl
RGD
PMID:10411502, PMID:10500184, PMID:11517919 GO_REF:0000107, MGI:MGI:1340887, MGI:MGI:1346236, MGI:MGI:5142377 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smad3 SMAD family member 3 ISO MGI:MGI:108051 (MGI:MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:MGI:3618021 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Smo smoothened, frizzled class receptor ISO
ISS
IEA
(MGI:MGI:5142377|PMID:11517919)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:11517919 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5142377 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO MGI:MGI:2179440 (MGI:MGI:3716256|PMID:17610846), (MGI:MGI:3716378|PMID:17655922) RGD PMID:17610846, PMID:17655922 MGI:MGI:3716256, MGI:MGI:3716378 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
G Srf serum response factor ISO MGI:MGI:2385465|MGI:MGI:2386742 (MGI:MGI:3603734|PMID:15929941) RGD PMID:15929941 MGI:MGI:3603734 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Stil STIL, centriolar assembly protein ISO MGI:MGI:2152962 (MGI:MGI:1339521|PMID:10385121) RGD PMID:10385121 MGI:MGI:1339521 NCBI chr 5:133,819,302...133,851,362
Ensembl chr 5:133,819,726...133,851,416
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO MGI:MGI:3512046 (MGI:MGI:3604917|PMID:16155214) RGD PMID:16155214 MGI:MGI:3604917 NCBI chr 1:266,143,766...266,241,742
Ensembl chr 1:266,143,818...266,239,016
JBrowse link
G Tbr1 T-box brain transcription factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:47,677,720...47,685,902
Ensembl chr 3:47,677,720...47,685,902
JBrowse link
G Tbx20 T-box transcription factor 20 ISO
IBA
MGI:MGI:3579849|MGI:MGI:3580099 (MGI:MGI:3578601|PMID:15843407), (MGI:MGI:3579960|PMID:15901664), (MGI:MGI:3604925|PMID:15843409)
PMID:21873635
RGD PMID:15843407, PMID:15843409, PMID:15901664, PMID:21873635 MGI:MGI:3578601, MGI:MGI:3579960, MGI:MGI:3604925, RGD:13792537 NCBI chr 8:25,849,394...25,904,570
Ensembl chr 8:25,850,962...25,904,570
JBrowse link
G Tbx21 T-box transcription factor 21 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:85,032,799...85,049,331
Ensembl chr10:85,032,799...85,049,331
JBrowse link
G Tbx22 T-box transcription factor 22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:78,731,738...78,782,542
Ensembl chr  X:78,769,419...78,782,542
JBrowse link
G Tbx3 T-box transcription factor 3 ISO
IBA
MGI:MGI:2655214|MGI:MGI:3769504 (MGI:MGI:3769096|PMID:17460765), (MGI:MGI:4412356|PMID:18723448)
PMID:21873635
RGD PMID:17460765, PMID:18723448, PMID:21873635 MGI:MGI:3769096, MGI:MGI:4412356, RGD:13792537 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Tbx6 T-box transcription factor 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:198,214,797...198,218,706
Ensembl chr 1:198,214,797...198,218,706
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 ISO (MGI:MGI:3801267|PMID:17050629) RGD PMID:17050629 MGI:MGI:3801267 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 ISO MGI:MGI:4343479|MGI:MGI:4456438 (MGI:MGI:4453264|PMID:20178780) RGD PMID:20178780 MGI:MGI:4453264 NCBI chr12:37,471,259...37,480,344
Ensembl chr12:37,471,260...37,480,297
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO (MGI:MGI:2157686|PMID:11440971) RGD PMID:11440971 MGI:MGI:2157686 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Wnt3a Wnt family member 3A ISO MGI:MGI:1857489 (MGI:MGI:3611726|PMID:16291790) RGD PMID:16291790 MGI:MGI:3611726 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1298218 (MGI:MGI:4413372|PMID:19795512)
GO_REF:0000107
RGD
Ensembl
PMID:19795512 GO_REF:0000107, MGI:MGI:4413372 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Zic3 Zic family member 3 ISO (PMID:9354794)
MGI:MGI:2180720|MGI:MGI:3043027|MGI:MGI:97359 (MGI:MGI:3056222|PMID:15384171), (MGI:MGI:3624254|PMID:16496285)
RGD PMID:9354794, PMID:15384171, PMID:16496285 MGI:MGI:3056222, MGI:MGI:3624254 NCBI chr  X:140,875,191...140,888,344
Ensembl chr  X:140,878,216...140,888,795
JBrowse link
initiation of neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm2b lysine demethylase 2B ISO (MGI:MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:MGI:4949568 NCBI chr12:39,021,924...39,161,954
Ensembl chr12:39,078,119...39,161,956
JBrowse link
lateral sprouting involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 ISO MGI:MGI:2668337 (MGI:MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:MGI:4452277 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:1857642 (MGI:MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:MGI:4452277 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
lateral sprouting involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO
IEA
MGI:MGI:2687199 (MGI:MGI:2683859|PMID:14676301)
GO_REF:0000107
RGD
Ensembl
PMID:14676301 GO_REF:0000107, MGI:MGI:2683859 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
(MGI:MGI:3761053|PMID:17898001)
GO_REF:0000107
RGD
Ensembl
PMID:17898001 GO_REF:0000107, MGI:MGI:3761053 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:MGI:2148567|MGI:MGI:2148569 (MGI:MGI:4360856|PMID:19686689), (MGI:MGI:4361775|PMID:19805295)
Ensembl
RGD
PMID:19686689, PMID:19805295 GO_REF:0000107, MGI:MGI:4360856, MGI:MGI:4361775 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Wnt2 Wnt family member 2 ISO MGI:MGI:1261834 (MGI:MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:MGI:4360856 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
G Wnt2b Wnt family member 2B ISO MGI:MGI:98954 (MGI:MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:MGI:4360856 NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
JBrowse link
mammary duct terminal end bud growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl11 C-C motif chemokine ligand 11 ISO MGI:MGI:2384435 (MGI:MGI:3640884|PMID:10804170) RGD PMID:10804170 MGI:MGI:3640884 NCBI chr10:69,434,965...69,439,566
Ensembl chr10:69,434,941...69,439,575
JBrowse link
G Csf1 colony stimulating factor 1 ISO MGI:MGI:1856333 (MGI:MGI:3640884|PMID:10804170) RGD PMID:10804170 MGI:MGI:3640884 NCBI chr 2:210,522,370...210,550,546
Ensembl chr 2:210,522,375...210,550,560
JBrowse link
G Kdm5b lysine demethylase 5B ISO MGI:MGI:4329395 (MGI:MGI:5619178|PMID:24802759) RGD PMID:24802759 MGI:MGI:5619178 NCBI chr13:51,384,371...51,455,392
Ensembl chr13:51,384,389...51,455,357
JBrowse link
G Mst1 macrophage stimulating 1 ISO MGI:MGI:2445230 (MGI:MGI:5614192|PMID:25049204) RGD PMID:25049204 MGI:MGI:5614192 NCBI chr 8:116,857,716...116,862,286
Ensembl chr 8:116,857,684...116,862,423
JBrowse link
G Robo1 roundabout guidance receptor 1 ISO MGI:MGI:3043142 (MGI:MGI:3617129|PMID:16439476) RGD PMID:16439476 MGI:MGI:3617129 NCBI chr11:9,079,291...10,146,302
Ensembl chr11:9,642,365...10,143,317
JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO MGI:MGI:1935144 (MGI:MGI:2180453|PMID:12040017) RGD PMID:12040017 MGI:MGI:2180453 NCBI chr18:52,917,124...52,985,281
Ensembl chr18:52,917,124...52,985,261
JBrowse link
G Slit2 slit guidance ligand 2 ISO MGI:MGI:2179460 (MGI:MGI:3617129|PMID:16439476) RGD PMID:16439476 MGI:MGI:3617129 NCBI chr14:66,831,848...67,171,491
Ensembl chr14:66,831,848...67,170,361
JBrowse link
mammary gland branching involved in pregnancy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csmd1 CUB and Sushi multiple domains 1 ISO MGI:MGI:5473214 (MGI:MGI:6369467|PMID:31604923) RGD PMID:31604923 MGI:MGI:6369467 NCBI chr16:77,152,823...78,850,222
Ensembl chr16:78,539,489...78,850,222
JBrowse link
G Esr1 estrogen receptor 1 ISO
IEA
MGI:MGI:2150897 (MGI:MGI:1926565|PMID:10919287)
GO_REF:0000107
RGD
Ensembl
PMID:10919287 GO_REF:0000107, MGI:MGI:1926565 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:MGI:3511276 (MGI:MGI:3576991|PMID:15647257) RGD PMID:15647257 MGI:MGI:3576991 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Vdr vitamin D receptor ISO
IEA
MGI:MGI:2183404 (MGI:MGI:3051725|PMID:15178742)
GO_REF:0000107
RGD
Ensembl
PMID:15178742 GO_REF:0000107, MGI:MGI:3051725 NCBI chr 7:139,344,452...139,394,138
Ensembl chr 7:139,342,063...139,394,166
JBrowse link
mammary gland branching involved in thelarche term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin ISO MGI:MGI:2176531 (MGI:MGI:1336843|PMID:10331984), (MGI:MGI:3703920|PMID:17369357) RGD PMID:10331984, PMID:17369357 MGI:MGI:1336843, MGI:MGI:3703920 NCBI chr14:18,521,921...18,531,179
Ensembl chr14:18,521,930...18,531,179
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:MGI:3511276 (MGI:MGI:3576991|PMID:15647257) RGD PMID:15647257 MGI:MGI:3576991 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO MGI:MGI:1931860 (MGI:MGI:1859522|PMID:11015591) RGD PMID:11015591 MGI:MGI:1859522 NCBI chr 3:162,692,176...162,788,582
Ensembl chr 3:162,692,185...162,787,548
JBrowse link
G Phb2 prohibitin 2 ISO MGI:MGI:3574361 (MGI:MGI:3695669|PMID:17065319) RGD PMID:17065319 MGI:MGI:3695669 NCBI chr 4:157,230,769...157,235,375
Ensembl chr 4:157,230,769...157,235,367
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO MGI:MGI:1857258 (MGI:MGI:3814777|PMID:18614704) RGD PMID:18614704 MGI:MGI:3814777 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
(MGI:MGI:3761053|PMID:17898001)
GO_REF:0000107
RGD
Ensembl
PMID:17898001 GO_REF:0000107, MGI:MGI:3761053 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
mammary gland bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pthlh parathyroid hormone-like hormone ISO MGI:MGI:2154515 (MGI:MGI:1203302|PMID:9477327) RGD PMID:9477327 MGI:MGI:1203302 NCBI chr 4:181,663,425...181,674,181 JBrowse link
mammary gland bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1859647 (MGI:MGI:2155478|PMID:11782400) RGD PMID:11782400 MGI:MGI:2155478 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:2153811 (MGI:MGI:2155478|PMID:11782400) RGD PMID:11782400 MGI:MGI:2155478 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
mammary gland bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sostdc1 sclerostin domain containing 1 ISO MGI:MGI:3604658 (MGI:MGI:5319554|PMID:22509524) RGD PMID:22509524 MGI:MGI:5319554 NCBI chr 6:55,812,820...55,816,994
Ensembl chr 6:55,812,747...55,817,066
JBrowse link
mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli2 GLI family zinc finger 2 ISO MGI:MGI:1857509 (MGI:MGI:2151643|PMID:11783999) RGD PMID:11783999 MGI:MGI:2151643 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO MGI:MGI:1298218 (MGI:MGI:3849913|PMID:19503830) RGD PMID:19503830 MGI:MGI:3849913 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO MGI:MGI:1278315 (MGI:MGI:3849913|PMID:19503830) RGD PMID:19503830 MGI:MGI:3849913 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 ISO MGI:MGI:1857745 (MGI:MGI:3758540|PMID:12198239) RGD PMID:12198239 MGI:MGI:3758540 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Ntn1 netrin 1 ISO
IEA
MGI:MGI:1315205 (MGI:MGI:3617129|PMID:16439476)
GO_REF:0000107
RGD
Ensembl
PMID:16439476 GO_REF:0000107, MGI:MGI:3617129 NCBI chr10:54,761,925...54,982,072
Ensembl chr10:54,761,871...54,967,585
JBrowse link
G Ptch1 patched 1 ISO MGI:MGI:1857447 (MGI:MGI:1346456|PMID:10529434) RGD PMID:10529434 MGI:MGI:1346456 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Scrib scribble planar cell polarity protein ISO (MGI:MGI:4359580|PMID:19041750) RGD PMID:19041750 MGI:MGI:4359580 NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798
JBrowse link
G Slit2 slit guidance ligand 2 ISO MGI:MGI:105088|MGI:MGI:2179460 (MGI:MGI:3617129|PMID:16439476) RGD PMID:16439476 MGI:MGI:3617129 NCBI chr14:66,831,848...67,171,491
Ensembl chr14:66,831,848...67,170,361
JBrowse link
mesonephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:MGI:4430439 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Wnt9b Wnt family member 9B ISO MGI:MGI:3526437 (MGI:MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:MGI:3588895 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
mesonephric duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc3 glypican 3 ISO
ISS
IEA
MGI:MGI:2159356 (MGI:MGI:1931343|PMID:11180950)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:11180950 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1931343 NCBI chr  X:139,579,268...139,947,093
Ensembl chr  X:139,579,268...139,916,883
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO
ISS
(MGI:MGI:3697513|PMID:16790474)
GO_REF:0000024
RGD
UniProt
PMID:16790474 GO_REF:0000024, MGI:MGI:3697513 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
mesonephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
metanephric distal tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (PMID:11891195) RGD PMID:11891195 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
JBrowse link
metanephric nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Sox8 SRY-box transcription factor 8 ISO
ISS
MGI:MGI:98371 (MGI:MGI:4939090|PMID:21212101)
GO_REF:0000024
RGD
UniProt
PMID:21212101 GO_REF:0000024, MGI:MGI:4939090 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO
ISS
MGI:MGI:98370 (MGI:MGI:4939090|PMID:21212101)
GO_REF:0000024
RGD
UniProt
PMID:21212101 GO_REF:0000024, MGI:MGI:4939090 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
metanephric nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 IEA
ISO
GO_REF:0000107
(PMID:15465493)
Ensembl
RGD
PMID:15465493 GO_REF:0000107 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hes5 hes family bHLH transcription factor 5 ISO (PMID:15465493) RGD PMID:15465493 NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 ISO (MGI:MGI:5006869|PMID:21523854) RGD PMID:21523854 MGI:MGI:5006869 NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
JBrowse link
metanephric tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 ISO
IEA
MGI:MGI:1857453 (MGI:MGI:4950307|PMID:21350016)
GO_REF:0000107
RGD
Ensembl
PMID:21350016 GO_REF:0000107, MGI:MGI:4950307 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
G Wnt9b Wnt family member 9B ISO MGI:MGI:3526437 (MGI:MGI:4950307|PMID:21350016) RGD PMID:21350016 MGI:MGI:4950307 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
metanephric tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr2 C-X-C motif chemokine receptor 2 IMP RGD PMID:17634442 RGD:7257700 NCBI chr 9:81,427,275...81,435,065
Ensembl chr 9:81,427,730...81,434,102
JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
ISS
GO_REF:0000107
(PMID:10706139), (PMID:17118062)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10706139, PMID:17118062 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnf tumor necrosis factor ISO (PMID:17350185) RGD PMID:17350185 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISS
ISO
GO_REF:0000024
MGI:MGI:102780 (MGI:MGI:3525902|PMID:15634693), (MGI:MGI:4949995|PMID:21281623)
(PMID:12141440), (PMID:17118062)
UniProt
RGD
PMID:12141440, PMID:15634693, PMID:17118062, PMID:21281623 GO_REF:0000024, MGI:MGI:3525902, MGI:MGI:4949995 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5315060|PMID:22194864)
Ensembl
UniProt
RGD
PMID:22194864 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5315060 NCBI chr 4:98,341,187...98,342,887
Ensembl chr 4:98,341,188...98,342,887
JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 ISO
ISS
(MGI:MGI:3822373|PMID:19112489)
GO_REF:0000024
RGD
UniProt
PMID:19112489 GO_REF:0000024, MGI:MGI:3822373 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 ISO
ISS
(MGI:MGI:3822373|PMID:19112489)
GO_REF:0000024
RGD
UniProt
PMID:19112489 GO_REF:0000024, MGI:MGI:3822373 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
negative regulation of heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box transcription factor 2 ISO (MGI:MGI:3039059|PMID:15042700) RGD PMID:15042700 MGI:MGI:3039059 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 ISO MGI:MGI:98958 (MGI:MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:MGI:4830282 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
nephric duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 ISO (MGI:MGI:3613206|PMID:16216236) RGD PMID:16216236 MGI:MGI:3613206 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
nephric duct formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 ISO
ISS
(MGI:MGI:3611949|PMID:16319112)
GO_REF:0000024
RGD
UniProt
PMID:16319112 GO_REF:0000024, MGI:MGI:3611949 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:4430449|PMID:19913010) RGD PMID:19913010 MGI:MGI:4430449 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Pax2 paired box 2 ISO
ISS
(MGI:MGI:2445273|PMID:12435636)
GO_REF:0000024
RGD
UniProt
PMID:12435636 GO_REF:0000024, MGI:MGI:2445273 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
nephric duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb2 ephrin B2 ISO MGI:MGI:3026687 (MGI:MGI:5604037|PMID:25139858) RGD PMID:25139858 MGI:MGI:5604037 NCBI chr16:86,631,151...86,672,050
Ensembl chr16:86,631,064...86,675,049
JBrowse link
G Epha4 Eph receptor A4 ISO MGI:MGI:95276 (MGI:MGI:5604037|PMID:25139858) RGD PMID:25139858 MGI:MGI:5604037 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458
JBrowse link
G Epha7 Eph receptor A7 ISO MGI:MGI:98277 (MGI:MGI:5604037|PMID:25139858) RGD PMID:25139858 MGI:MGI:5604037 NCBI chr 5:43,602,744...43,761,198
Ensembl chr 5:43,603,043...43,757,549
JBrowse link
G Gata3 GATA binding protein 3 ISO
ISS
(MGI:MGI:3822373|PMID:19112489)
GO_REF:0000024
RGD
UniProt
PMID:19112489 GO_REF:0000024, MGI:MGI:3822373 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Lhx1 LIM homeobox 1 ISO
ISS
(MGI:MGI:3613206|PMID:16216236)
GO_REF:0000024
RGD
UniProt
PMID:16216236 GO_REF:0000024, MGI:MGI:3613206 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
nephron tubule formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 ISO
IEA
MGI:MGI:1858008 (MGI:MGI:3714576|PMID:17537789)
GO_REF:0000107
RGD
Ensembl
PMID:17537789 GO_REF:0000107, MGI:MGI:3714576 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Wnt6 Wnt family member 6 ISO (MGI:MGI:2178881|PMID:11948913) RGD PMID:11948913 MGI:MGI:2178881 NCBI chr 9:82,033,543...82,047,172
Ensembl chr 9:82,033,543...82,047,166
JBrowse link
nephron tubule morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt9b Wnt family member 9B ISO MGI:MGI:3526437|MGI:MGI:3805020 (MGI:MGI:4353952|PMID:19543268) RGD PMID:19543268 MGI:MGI:4353952 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
neural fold bending term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Luzp1 leucine zipper protein 1 ISO
IBA
IEA
MGI:MGI:3818454 (MGI:MGI:3818102|PMID:18801334)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:18801334, PMID:21873635 GO_REF:0000107, MGI:MGI:3818102, RGD:13792537 NCBI chr 5:154,831,697...154,907,646
Ensembl chr 5:154,868,534...154,907,634
JBrowse link
neural fold elevation formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 ISO UniProtKB:P23359 (MGI:MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:MGI:1332253 NCBI chr 8:82,669,466...82,950,273
Ensembl chr 8:82,878,941...82,950,273
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO UniProtKB:P49003 (MGI:MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:MGI:1332253 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO
IEA
MGI:MGI:1857719 (MGI:MGI:1337194|PMID:10328919)
GO_REF:0000107
RGD
Ensembl
PMID:10328919 GO_REF:0000107, MGI:MGI:1337194 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
neural fold formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cecr2 CECR2, histone acetyl-lysine reader ISO MGI:MGI:3574034 (MGI:MGI:4880797|PMID:21246654) RGD PMID:21246654 MGI:MGI:4880797 NCBI chr 4:153,217,521...153,327,153
Ensembl chr 4:153,217,782...153,322,564
JBrowse link
G Cfl1 cofilin 1 ISO MGI:MGI:3574399 (MGI:MGI:3530675|PMID:15649475) RGD PMID:15649475 MGI:MGI:3530675 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
JBrowse link
G Gatad2a GATA zinc finger domain containing 2A ISO (MGI:MGI:3762244|PMID:17565372) RGD PMID:17565372 MGI:MGI:3762244 NCBI chr16:21,177,793...21,267,768
Ensembl chr16:21,178,138...21,268,504
JBrowse link
G Nodal nodal growth differentiation factor ISO MGI:MGI:2158732 (MGI:MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:MGI:2155575 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Ovol2 ovo-like zinc finger 2 ISO MGI:MGI:3522498 (MGI:MGI:3618450|PMID:16423343) RGD PMID:16423343 MGI:MGI:3618450 NCBI chr 3:138,433,990...138,464,511
Ensembl chr 3:138,433,990...138,462,063
JBrowse link
neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO MGI:MGI:87860 (MGI:MGI:1327082|PMID:9883720) RGD PMID:9883720 MGI:MGI:1327082 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ISO MGI:MGI:87859 (MGI:MGI:1327082|PMID:9883720) RGD PMID:9883720 MGI:MGI:1327082 NCBI chr13:74,154,533...74,333,244
Ensembl chr13:74,154,835...74,333,244
JBrowse link
G Adm adrenomedullin ISO MGI:MGI:2176598 (MGI:MGI:3689296|PMID:16981008) RGD PMID:16981008 MGI:MGI:3689296 NCBI chr 1:175,443,189...175,447,260
Ensembl chr 1:175,445,088...175,447,259
JBrowse link
G Alx1 ALX homeobox 1 ISO MGI:MGI:1857553 (MGI:MGI:81193|PMID:8673125) RGD PMID:8673125 MGI:MGI:81193 NCBI chr 7:44,751,865...44,771,458
Ensembl chr 7:44,751,873...44,771,458
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 ISO MGI:MGI:1888997 (MGI:MGI:2149166|PMID:11504943), (MGI:MGI:893797|PMID:9216040) RGD PMID:9216040, PMID:11504943 MGI:MGI:2149166, MGI:MGI:893797 NCBI chr 7:31,699,309...31,784,192
Ensembl chr 7:31,699,885...31,784,192
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 ISO
IEA
MGI:MGI:2448591 (MGI:MGI:1926242|PMID:11044403)
GO_REF:0000107
RGD
Ensembl
PMID:11044403 GO_REF:0000107, MGI:MGI:1926242 NCBI chr 1:78,456,409...78,573,374
Ensembl chr 1:78,456,409...78,573,374
JBrowse link
G Arid1a AT-rich interaction domain 1A ISO MGI:MGI:5469314 (MGI:MGI:5466629|PMID:23129809) RGD PMID:23129809 MGI:MGI:5466629 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO MGI:MGI:3055492 (MGI:MGI:3607949|PMID:16170314) RGD PMID:16170314 MGI:MGI:3607949 NCBI chr 8:64,115,005...64,154,432
Ensembl chr 8:64,121,392...64,154,396
JBrowse link
G Bcl10 BCL10, immune signaling adaptor ISO
ISS
(MGI:MGI:1930354|PMID:11163238) RGD PMID:11163238, PMID:11163238 MGI:MGI:1930354, RGD:734638 NCBI chr 2:251,805,392...251,814,957
Ensembl chr 2:251,805,392...251,814,957
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO
IEA
(MGI:MGI:4429763|PMID:19850029)
GO_REF:0000107
RGD
Ensembl
PMID:19850029 GO_REF:0000107, MGI:MGI:4429763 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A ISO MGI:MGI:5708063 (MGI:MGI:5696765|PMID:24947469) RGD PMID:24947469 MGI:MGI:5696765 NCBI chr14:71,895,128...71,979,452
Ensembl chr14:71,895,246...71,973,419
JBrowse link
G Cdk20 cyclin-dependent kinase 20 ISO
IEA
MGI:MGI:6113512 (MGI:MGI:5912686|PMID:28817564)
GO_REF:0000107
RGD
Ensembl
PMID:28817564 GO_REF:0000107, MGI:MGI:5912686 NCBI chr17:1,935,900...1,942,867
Ensembl chr17:1,936,163...1,942,865
JBrowse link
G Cecr2 CECR2, histone acetyl-lysine reader ISO MGI:MGI:2135272|MGI:MGI:3574034|MGI:MGI:4829945 (MGI:MGI:3530173|PMID:15640247), (MGI:MGI:4822542|PMID:20589882), (MGI:MGI:4880797|PMID:21246654) RGD PMID:15640247, PMID:20589882, PMID:21246654 MGI:MGI:3530173, MGI:MGI:4822542, MGI:MGI:4880797 NCBI chr 4:153,217,521...153,327,153
Ensembl chr 4:153,217,782...153,322,564
JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 ISO MGI:MGI:107926|MGI:MGI:2135272 (MGI:MGI:2667273|PMID:12842012), (MGI:MGI:3703464|PMID:17229766) RGD PMID:12842012, PMID:17229766 MGI:MGI:2667273, MGI:MGI:3703464 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO MGI:MGI:2385355 (MGI:MGI:2384266|PMID:12149478) RGD PMID:12149478 MGI:MGI:2384266 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Cluap1 clusterin associated protein 1 ISO MGI:MGI:5523142 (MGI:MGI:5509110|PMID:23742838) RGD PMID:23742838 MGI:MGI:5509110 NCBI chr10:11,847,058...11,878,792
Ensembl chr10:11,847,102...11,878,792
JBrowse link
G Cobl cordon-bleu WH2 repeat protein ISO
IEA
MGI:MGI:2135272 (MGI:MGI:2676511|PMID:14512015)
GO_REF:0000107
RGD
Ensembl
PMID:14512015 GO_REF:0000107, MGI:MGI:2676511 NCBI chr14:92,341,949...92,497,169
Ensembl chr14:92,342,957...92,577,936
JBrowse link
G Deaf1 DEAF1 transcription factor IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3029622|PMID:14966286)
Ensembl
UniProt
RGD
PMID:14966286 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3029622 NCBI chr 1:214,283,787...214,317,466
Ensembl chr 1:214,283,790...214,317,466
JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein ISO MGI:MGI:3529997 (MGI:MGI:3529660|PMID:15710412) RGD PMID:15710412 MGI:MGI:3529660 NCBI chr16:58,776,489...59,247,752
Ensembl chr16:59,077,574...59,247,754
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 ISO MGI:MGI:2429760 (MGI:MGI:2389015|PMID:12421720) RGD PMID:12421720 MGI:MGI:2389015 NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
JBrowse link
G Enah ENAH, actin regulator ISO MGI:MGI:109268|MGI:MGI:97549 (MGI:MGI:1331576|PMID:10069337), (MGI:MGI:3054149|PMID:15371503) RGD PMID:10069337, PMID:15371503 MGI:MGI:1331576, MGI:MGI:3054149 NCBI chr13:100,297,421...100,415,335
Ensembl chr13:100,300,054...100,414,226
JBrowse link
G Fuz fuzzy planar cell polarity protein ISO
ISS
(PMID:21840926)
MGI:MGI:4346364 (MGI:MGI:4367921|PMID:19877275), (MGI:MGI:4438317|PMID:19767740), (MGI:MGI:5296277|PMID:21840926)
GO_REF:0000024
RGD
UniProt
PMID:19767740, PMID:19877275, PMID:21840926 GO_REF:0000024, MGI:MGI:4367921, MGI:MGI:4438317, MGI:MGI:5296277 NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807
JBrowse link
G Fzd3 frizzled class receptor 3 ISO MGI:MGI:108474 (MGI:MGI:3616416|PMID:16495441) RGD PMID:16495441 MGI:MGI:3616416 NCBI chr15:48,601,259...48,670,257
Ensembl chr15:48,601,266...48,670,257
JBrowse link
G Fzd6 frizzled class receptor 6 ISO MGI:MGI:108476 (MGI:MGI:3616416|PMID:16495441) RGD PMID:16495441 MGI:MGI:3616416 NCBI chr 7:77,898,329...77,931,034
Ensembl chr 7:77,899,322...77,931,029
JBrowse link
G Glmn glomulin, FKBP associated protein ISO MGI:MGI:3817643 (MGI:MGI:5320488|PMID:22405651) RGD PMID:22405651 MGI:MGI:5320488 NCBI chr14:3,204,390...3,247,703
Ensembl chr14:3,204,390...3,247,695
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 ISO MGI:MGI:4331210 (MGI:MGI:4835348|PMID:20654612), (MGI:MGI:4867118|PMID:20978075), (MGI:MGI:4947318|PMID:21262862) RGD PMID:20654612, PMID:20978075, PMID:21262862 MGI:MGI:4835348, MGI:MGI:4867118, MGI:MGI:4947318 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Grhl3 grainyhead-like transcription factor 3 ISO (MGI:MGI:3689640|PMID:16949565), (MGI:MGI:4835348|PMID:20654612) RGD PMID:16949565, PMID:20654612 MGI:MGI:3689640, MGI:MGI:4835348 NCBI chr 5:153,893,039...153,925,045
Ensembl chr 5:153,893,039...153,924,896
JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 ISO MGI:MGI:2137552 (MGI:MGI:1267118|PMID:9636176), (MGI:MGI:3577662|PMID:15755804), (MGI:MGI:3714713|PMID:17442300) RGD PMID:9636176, PMID:15755804, PMID:17442300 MGI:MGI:1267118, MGI:MGI:3577662, MGI:MGI:3714713 NCBI chr 6:72,509,658...72,596,285
Ensembl chr 6:72,510,255...72,596,446
JBrowse link
G Ift122 intraflagellar transport 122 ISO (MGI:MGI:3827087|PMID:19000668) RGD PMID:19000668 MGI:MGI:3827087 NCBI chr 4:147,756,574...147,826,983
Ensembl chr 4:147,756,553...147,826,997
JBrowse link
G Ift172 intraflagellar transport 172 ISO MGI:MGI:3829198 (MGI:MGI:3828200|PMID:18930042) RGD PMID:18930042 MGI:MGI:3828200 NCBI chr 6:26,390,686...26,485,459 JBrowse link
G Ift57 intraflagellar transport 57 ISO MGI:MGI:3707373 (MGI:MGI:3703110|PMID:17027958) RGD PMID:17027958 MGI:MGI:3703110 NCBI chr11:53,664,638...53,731,779
Ensembl chr11:53,664,638...53,731,779
JBrowse link
G Kat2a lysine acetyltransferase 2A ISO MGI:MGI:3711317 (MGI:MGI:3709911|PMID:17325035) RGD PMID:17325035 MGI:MGI:3709911 NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537
JBrowse link
G Kdm2a lysine demethylase 2A ISO (MGI:MGI:5615026|PMID:25463925) RGD PMID:25463925 MGI:MGI:5615026 NCBI chr 1:219,566,130...219,642,294
Ensembl chr 1:219,566,156...219,640,294
JBrowse link
G Kdm6a lysine demethylase 6A ISO MGI:MGI:5448825 (MGI:MGI:5448135|PMID:22949634) RGD PMID:22949634 MGI:MGI:5448135 NCBI chr  X:4,805,493...4,945,788
Ensembl chr  X:4,806,277...4,945,944
JBrowse link
G Kif20b kinesin family member 20B ISO MGI:MGI:3578531 (MGI:MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:MGI:3577662 NCBI chr 1:253,220,038...253,275,523
Ensembl chr 1:253,221,812...253,275,490
JBrowse link
G Lhx2 LIM homeobox 2 ISO
IEA
MGI:MGI:1890208 (MGI:MGI:2154554|PMID:11719201)
GO_REF:0000107
RGD
Ensembl
PMID:11719201 GO_REF:0000107, MGI:MGI:2154554 NCBI chr 3:22,628,674...22,658,447
Ensembl chr 3:22,640,545...22,658,446
JBrowse link
G Lias lipoic acid synthetase ISO MGI:MGI:3578174 (MGI:MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:MGI:3577662 NCBI chr14:44,507,217...44,524,287
Ensembl chr14:44,507,218...44,524,252
JBrowse link
G Lmo4 LIM domain only 4 ISO MGI:MGI:3035827|MGI:MGI:3574586 (MGI:MGI:3029621|PMID:14966285), (MGI:MGI:3573996|PMID:15691703), (MGI:MGI:3689640|PMID:16949565) RGD PMID:14966285, PMID:15691703, PMID:16949565 MGI:MGI:3029621, MGI:MGI:3573996, MGI:MGI:3689640 NCBI chr 2:250,218,635...250,235,435
Ensembl chr 2:250,218,641...250,241,673
JBrowse link
G LOC100909544 bromodomain-containing protein 2-like ISO MGI:MGI:3840071 (MGI:MGI:6120662|PMID:19362612) RGD PMID:19362612 MGI:MGI:6120662 NCBI chr20:3,910,555...3,918,348
Ensembl chr20:3,910,555...3,917,426
JBrowse link
G Lrp2 LDL receptor related protein 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5603707|PMID:24639464)
Ensembl
UniProt
RGD
PMID:24639464 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5603707 NCBI chr 3:55,665,153...55,822,484
Ensembl chr 3:55,665,145...55,822,551
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO
IBA
MGI:MGI:1861309|MGI:MGI:2673982|MGI:MGI:4415718|MGI:MGI:98958 (MGI:MGI:1347661|PMID:10545599), (MGI:MGI:3055483|PMID:15469977), (MGI:MGI:4413372|PMID:19795512), (MGI:MGI:4413396|PMID:19653321)
PMID:21873635
RGD PMID:10545599, PMID:15469977, PMID:19653321, PMID:19795512, PMID:21873635 MGI:MGI:1347661, MGI:MGI:3055483, MGI:MGI:4413372, MGI:MGI:4413396, MGI:MGI:61254, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Med12 mediator complex subunit 12 ISO MGI:MGI:4839484 (MGI:MGI:4839483|PMID:20630950) RGD PMID:20630950 MGI:MGI:4839483 NCBI chr  X:71,174,653...71,197,812
Ensembl chr  X:71,174,699...71,197,812
JBrowse link
G Mks1 MKS transition zone complex subunit 1 IEA
ISO
GO_REF:0000107
MGI:MGI:4410614|MGI:MGI:4433029 (MGI:MGI:4367169|PMID:19776033), (MGI:MGI:5487695|PMID:23454480)
Ensembl
RGD
PMID:19776033, PMID:23454480 GO_REF:0000107, MGI:MGI:4367169, MGI:MGI:5487695 NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO (MGI:MGI:5503248|PMID:23704330) RGD PMID:23704330 MGI:MGI:5503248 NCBI chr 6:99,282,850...99,350,367
Ensembl chr 6:99,282,850...99,350,340
JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like ISO (MGI:MGI:5468075|PMID:23267094) RGD PMID:23267094 MGI:MGI:5468075 NCBI chr 1:40,529,092...40,719,232
Ensembl chr 1:40,529,045...40,719,391
JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO (PMID:25855017), (PMID:29222906) RGD PMID:25855017, PMID:29222906 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
G Nckap1 NCK-associated protein 1 ISO MGI:MGI:3578145 (MGI:MGI:3701029|PMID:16831833) RGD PMID:16831833 MGI:MGI:3701029 NCBI chr 3:67,725,180...67,804,680
Ensembl chr 3:67,725,947...67,787,990
JBrowse link
G Nog noggin ISO
IEA
MGI:MGI:1856173|MGI:MGI:1862000 (MGI:MGI:3640733|PMID:16712836)
GO_REF:0000107
RGD
Ensembl
PMID:16712836 GO_REF:0000107, MGI:MGI:3640733 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase ISO MGI:MGI:3578528 (MGI:MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:MGI:3577662 NCBI chr11:74,717,600...74,793,902
Ensembl chr11:74,720,254...74,793,803
JBrowse link
G Pax2 paired box 2 ISO
ISS
(MGI:MGI:84247|PMID:8951055)
GO_REF:0000024
RGD
UniProt
PMID:8951055 GO_REF:0000024, MGI:MGI:84247 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax3 paired box 3 ISO MGI:MGI:3043030 (MGI:MGI:3056222|PMID:15384171) RGD PMID:15384171 MGI:MGI:3056222 NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172
JBrowse link
G Pfn1 profilin 1 ISO MGI:MGI:108360 (MGI:MGI:1331576|PMID:10069337) RGD PMID:10069337 MGI:MGI:1331576 NCBI chr10:57,273,003...57,275,708
Ensembl chr10:57,273,005...57,275,708
JBrowse link
G Phactr4 phosphatase and actin regulator 4 ISO (MGI:MGI:3719969|PMID:17609112) RGD PMID:17609112 MGI:MGI:3719969 NCBI chr 5:150,533,895...150,609,423
Ensembl chr 5:150,546,430...150,609,352
JBrowse link
G Plxnb2 plexin B2 ISO (MGI:MGI:3712712|PMID:17554007) RGD PMID:17554007 MGI:MGI:3712712 NCBI chr 7:130,135,484...130,161,568
Ensembl chr 7:130,135,464...130,151,880
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 IEA
ISO
GO_REF:0000107
(PMID:21901791)
Ensembl
RGD
PMID:21901791 GO_REF:0000107 NCBI chr 7:134,702,964...134,799,437
Ensembl chr 7:134,702,964...134,722,215
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO
IEA
MGI:MGI:97760 (MGI:MGI:5308523|PMID:22007132)
GO_REF:0000107
RGD
Ensembl
PMID:22007132 GO_REF:0000107, MGI:MGI:5308523 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Prkacb protein kinase cAMP-activated catalytic subunit beta ISO MGI:MGI:97592 (MGI:MGI:5308523|PMID:22007132) RGD PMID:22007132 MGI:MGI:5308523 NCBI chr 2:252,602,197...252,691,886
Ensembl chr 2:252,605,307...252,691,886
JBrowse link
G Ptch1 patched 1 ISO MGI:MGI:1857447 (MGI:MGI:1095757|PMID:9262482) RGD PMID:9262482 MGI:MGI:1095757 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Ptk7 protein tyrosine kinase 7 ISO MGI:MGI:2135272|MGI:MGI:3046905|MGI:MGI:3640803 (MGI:MGI:3046397|PMID:15229603), (MGI:MGI:4830023|PMID:20704721) RGD PMID:15229603, PMID:20704721 MGI:MGI:3046397, MGI:MGI:4830023 NCBI chr 9:16,662,588...16,729,888
Ensembl chr 9:16,702,460...16,729,030
JBrowse link
G Rab23 RAB23, member RAS oncogene family ISO MGI:MGI:2137533 (MGI:MGI:1267118|PMID:9636176), (MGI:MGI:69552|PMID:7720556) RGD PMID:7720556, PMID:9636176 MGI:MGI:1267118, MGI:MGI:69552 NCBI chr 9:38,469,784...38,496,185
Ensembl chr 9:38,470,298...38,495,176
JBrowse link
G Rala RAS like proto-oncogene A ISO (MGI:MGI:5504565|PMID:23063435) RGD PMID:23063435 MGI:MGI:5504565 NCBI chr17:49,676,073...49,729,133
Ensembl chr17:49,714,294...49,727,664
JBrowse link
G Rara retinoic acid receptor, alpha ISO MGI:MGI:97858 (MGI:MGI:69060|PMID:7607067) RGD PMID:7607067 MGI:MGI:69060 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G Rarg retinoic acid receptor, gamma ISO MGI:MGI:97856 (MGI:MGI:69060|PMID:7607067) RGD PMID:7607067 MGI:MGI:69060 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186
JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a ISO MGI:MGI:3029714 (MGI:MGI:3027667|PMID:14749425) RGD PMID:14749425 MGI:MGI:3027667 NCBI chr 1:134,699,053...134,742,512
Ensembl chr 1:134,699,299...134,742,514
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 ISO MGI:MGI:1100883|MGI:MGI:2135272 (MGI:MGI:3703464|PMID:17229766) RGD PMID:17229766 MGI:MGI:3703464 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
G Rps7 ribosomal protein S7 ISO MGI:MGI:3043039 (MGI:MGI:3056222|PMID:15384171) RGD PMID:15384171 MGI:MGI:3056222 NCBI chr 6:47,899,525...47,904,389
Ensembl chr 6:47,899,525...47,904,437
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO MGI:MGI:2139360 (MGI:MGI:3698636|PMID:16790473) RGD PMID:16790473 MGI:MGI:3698636 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Sall4 spalt-like transcription factor 4 ISO MGI:MGI:1889585|MGI:MGI:3699175 (MGI:MGI:3698636|PMID:16790473) RGD PMID:16790473 MGI:MGI:3698636 NCBI chr 3:165,520,155...165,538,176
Ensembl chr 3:165,520,392...165,537,940
JBrowse link
G Scrib scribble planar cell polarity protein ISO (PMID:22095531)
MGI:MGI:1889322|MGI:MGI:2135272|MGI:MGI:5056373 (MGI:MGI:4819429|PMID:20643356), (MGI:MGI:5050793|PMID:21515572)
RGD PMID:20643356, PMID:21515572, PMID:22095531 MGI:MGI:4819429, MGI:MGI:5050793 NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798
JBrowse link
G Sdc4 syndecan 4 ISO MGI:MGI:2135272 (MGI:MGI:5498591|PMID:23760952) RGD PMID:23760952 MGI:MGI:5498591 NCBI chr 3:160,872,503...160,891,190
Ensembl chr 3:160,872,503...160,891,190
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:MGI:2135272|MGI:MGI:4440621 (MGI:MGI:4438817|PMID:19966784), (MGI:MGI:4439427|PMID:20215345) RGD PMID:19966784, PMID:20215345 MGI:MGI:4438817, MGI:MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Sema4c semaphorin 4C ISO (MGI:MGI:4881530|PMID:21122816) RGD PMID:21122816 MGI:MGI:4881530 NCBI chr 9:43,129,413...43,140,442
Ensembl chr 9:43,129,415...43,139,870
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase ISO MGI:MGI:4437211 (MGI:MGI:4431136|PMID:20133625) RGD PMID:20133625 MGI:MGI:4431136 NCBI chr 8:118,802,478...118,888,224
Ensembl chr 8:118,803,075...118,888,224
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO MGI:MGI:108078 (MGI:MGI:4429763|PMID:19850029) RGD PMID:19850029 MGI:MGI:4429763 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:MGI:892014 (MGI:MGI:4429763|PMID:19850029) RGD PMID:19850029 MGI:MGI:4429763 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Shroom3 shroom family member 3 ISO MGI:MGI:1889778 (MGI:MGI:3610718|PMID:16249236) RGD PMID:16249236 MGI:MGI:3610718 NCBI chr14:16,622,767...16,903,265
Ensembl chr14:16,622,760...16,903,242
JBrowse link
G Ski SKI proto-oncogene ISO MGI:MGI:2177555 (MGI:MGI:1095997|PMID:9284043) RGD PMID:9284043 MGI:MGI:1095997 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 ISO MGI:MGI:1338031|MGI:MGI:1338881 (MGI:MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:MGI:4360135 NCBI chr 3:111,049,132...111,061,991
Ensembl chr 3:111,049,118...111,062,011
JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 ISO MGI:MGI:1338033|MGI:MGI:1338881|MGI:MGI:2156187 (MGI:MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:MGI:4360135 NCBI chr 1:87,199,373...87,221,826
Ensembl chr 1:87,199,313...87,221,892
JBrowse link
G St14 ST14 transmembrane serine protease matriptase ISO MGI:MGI:1338031|MGI:MGI:1338033 (MGI:MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:MGI:4360135 NCBI chr 8:32,240,113...32,280,813
Ensembl chr 8:32,240,133...32,280,869
JBrowse link
G Stil STIL, centriolar assembly protein ISO MGI:MGI:2152962 (MGI:MGI:1339521|PMID:10385121) RGD PMID:10385121 MGI:MGI:1339521 NCBI chr 5:133,819,302...133,851,362
Ensembl chr 5:133,819,726...133,851,416
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO MGI:MGI:3512046 (MGI:MGI:3604917|PMID:16155214) RGD PMID:16155214 MGI:MGI:3604917 NCBI chr 1:266,143,766...266,241,742
Ensembl chr 1:266,143,818...266,239,016
JBrowse link
G Tbxt T-box transcription factor T ISO MGI:MGI:1856158 (MGI:MGI:3701028|PMID:16835439) RGD PMID:16835439 MGI:MGI:3701028 NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832
JBrowse link
G Tead2 TEA domain transcription factor 2 ISO MGI:MGI:3763367 (MGI:MGI:3763398|PMID:17868131) RGD PMID:17868131 MGI:MGI:3763398 NCBI chr 1:101,213,782...101,230,483
Ensembl chr 1:101,213,788...101,230,477
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO MGI:MGI:2176682 (MGI:MGI:1313057|PMID:9811866), (MGI:MGI:80519|PMID:8622766) RGD PMID:8622766, PMID:9811866 MGI:MGI:1313057, MGI:MGI:80519 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO (MGI:MGI:74339|PMID:7600998) RGD PMID:7600998 MGI:MGI:74339 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO (MGI:MGI:894212|PMID:9217007) RGD PMID:9217007 MGI:MGI:894212 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 ISO MGI:MGI:3698004 (MGI:MGI:3697552|PMID:17082251) RGD PMID:17082251 MGI:MGI:3697552 NCBI chr 9:119,181,079...119,190,698
Ensembl chr 9:119,181,083...119,190,698
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 ISO MGI:MGI:4456438 (MGI:MGI:4453264|PMID:20178780) RGD PMID:20178780 MGI:MGI:4453264 NCBI chr12:37,471,259...37,480,344
Ensembl chr12:37,471,260...37,480,297
JBrowse link
G Traf6 TNF receptor associated factor 6 ISO (MGI:MGI:2181331|PMID:11007897) RGD PMID:11007897 MGI:MGI:2181331 NCBI chr 3:91,252,829...91,271,607
Ensembl chr 3:91,252,829...91,271,607
JBrowse link
G Trim71 tripartite motif containing 71 ISO MGI:MGI:4123844 (MGI:MGI:4356244|PMID:19098426) RGD PMID:19098426 MGI:MGI:4356244 NCBI chr 8:122,553,015...122,604,787
Ensembl chr 8:122,553,015...122,604,787
JBrowse link
G Tsc1 TSC complex subunit 1 ISO MGI:MGI:2183146 (MGI:MGI:2137425|PMID:11438694) RGD PMID:11438694 MGI:MGI:2137425 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link
G Tsc2 TSC complex subunit 2 ISO MGI:MGI:1926345 (MGI:MGI:1333508|PMID:10096549) RGD PMID:10096549 MGI:MGI:1333508 NCBI chr10:13,962,006...13,996,684
Ensembl chr10:13,961,947...13,996,584
JBrowse link
G Tulp3 TUB like protein 3 ISO MGI:MGI:3664273 (MGI:MGI:3841513|PMID:19223390) RGD PMID:19223390 MGI:MGI:3841513 NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO MGI:MGI:1857265 (MGI:MGI:72096|PMID:7729687) RGD PMID:7729687 MGI:MGI:72096 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:105056|MGI:MGI:107926|MGI:MGI:1100883|MGI:MGI:1349164|MGI:MGI:1857642|MGI:MGI:1918711|MGI:MGI:1923799|MGI:MGI:2139764|MGI:MGI:98958 (MGI:MGI:2153976|PMID:11709546), (MGI:MGI:2449213|PMID:12499390), (MGI:MGI:2676511|PMID:14512015), (MGI:MGI:3046397|PMID:15229603), (MGI:MGI:3703464|PMID:17229766), (MGI:MGI:3714704|PMID:17433286), (MGI:MGI:4438817|PMID:19966784), (MGI:MGI:4880797|PMID:21246654), (MGI:MGI:5498591|PMID:23760952) RGD PMID:11709546, PMID:12499390, PMID:14512015, PMID:15229603, PMID:17229766, PMID:17433286, PMID:19966784, PMID:21246654, PMID:23760952 MGI:MGI:2153976, MGI:MGI:2449213, MGI:MGI:2676511, MGI:MGI:3046397, MGI:MGI:3703464, MGI:MGI:3714704, MGI:MGI:4438817, MGI:MGI:4880797, MGI:MGI:5498591 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Vasp vasodilator-stimulated phosphoprotein ISO
IBA
MGI:MGI:108360 (MGI:MGI:3054149|PMID:15371503)
PMID:21873635
RGD PMID:15371503, PMID:21873635 MGI:MGI:3054149, RGD:13792537 NCBI chr 1:80,170,608...80,185,882
Ensembl chr 1:80,170,619...80,185,882
JBrowse link
G Wnt5a Wnt family member 5A ISO MGI:MGI:1298218|MGI:MGI:2135272 (MGI:MGI:3714704|PMID:17433286), (MGI:MGI:4413372|PMID:19795512) RGD PMID:17433286, PMID:19795512 MGI:MGI:3714704, MGI:MGI:4413372 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO MGI:MGI:2387501 (MGI:MGI:3624924|PMID:16598713) RGD PMID:16598713 MGI:MGI:3624924 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865
JBrowse link
G Zic2 Zic family member 2 ISO MGI:MGI:1862004 (MGI:MGI:3056222|PMID:15384171) RGD PMID:15384171 MGI:MGI:3056222 NCBI chr15:108,908,366...108,913,812
Ensembl chr15:108,908,607...108,912,737
JBrowse link
G Zic5 Zic family member 5 ISO MGI:MGI:3052154 (MGI:MGI:3051968|PMID:15136147) RGD PMID:15136147 MGI:MGI:3051968 NCBI chr15:108,891,992...108,907,601
Ensembl chr15:108,891,992...108,898,703
JBrowse link
neural tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brpf1 bromodomain and PHD finger containing, 1 ISO MGI:MGI:5705132 (MGI:MGI:5806011|PMID:27528195) RGD PMID:27528195 MGI:MGI:5806011 NCBI chr 4:145,264,445...145,280,943
Ensembl chr 4:145,264,462...145,280,857
JBrowse link
G Casp8 caspase 8 ISO MGI:MGI:3609638 (MGI:MGI:3609631|PMID:12404118) RGD PMID:12404118 MGI:MGI:3609631 NCBI chr 9:65,614,142...65,662,624
Ensembl chr 9:65,614,142...65,662,106
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO MGI:MGI:2179740 (MGI:MGI:2179743|PMID:11694877) RGD PMID:11694877 MGI:MGI:2179743 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Coq7 coenzyme Q7, hydroxylase ISO MGI:MGI:2158322 (MGI:MGI:2154585|PMID:11716496) RGD PMID:11716496 MGI:MGI:2154585 NCBI chr 1:188,176,060...188,190,874
Ensembl chr 1:188,174,874...188,190,860
JBrowse link
G Ift172 intraflagellar transport 172 ISO MGI:MGI:2682066 (MGI:MGI:2679893|PMID:14603322) RGD PMID:14603322 MGI:MGI:2679893 NCBI chr 6:26,390,686...26,485,459 JBrowse link
G Ift52 intraflagellar transport 52 ISO (MGI:MGI:3579954|PMID:15930098) RGD PMID:15930098 MGI:MGI:3579954 NCBI chr 3:159,388,868...159,413,358
Ensembl chr 3:159,392,193...159,413,575
JBrowse link
G Ipmk inositol polyphosphate multikinase ISO MGI:MGI:3583918 (MGI:MGI:3583505|PMID:15939867) RGD PMID:15939867 MGI:MGI:3583505 NCBI chr20:18,457,309...18,489,884
Ensembl chr20:18,457,310...18,489,833
JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 ISO (MGI:MGI:3607973|PMID:16260493) RGD PMID:16260493 MGI:MGI:3607973 NCBI chr 5:47,183,142...47,244,424
Ensembl chr 5:47,186,558...47,244,416
JBrowse link
G Mib1 mindbomb E3 ubiquitin protein ligase 1 ISO MGI:MGI:3603514 (MGI:MGI:3603078|PMID:16000382) RGD PMID:16000382 MGI:MGI:3603078 NCBI chr18:1,970,914...2,094,920
Ensembl chr18:1,970,914...2,094,920
JBrowse link
G Nup50 nucleoporin 50 ISO
IEA
MGI:MGI:103561|MGI:MGI:107532|MGI:MGI:2152414|MGI:MGI:2385621|MGI:MGI:2386173 (MGI:MGI:1860670|PMID:10891500)
GO_REF:0000107
RGD
Ensembl
PMID:10891500 GO_REF:0000107, MGI:MGI:1860670 NCBI chr 7:125,833,557...125,850,830
Ensembl chr 7:125,833,557...125,850,827
JBrowse link
G Ptch1 patched 1 ISO (MGI:MGI:3687672|PMID:10500113) RGD PMID:10500113 MGI:MGI:3687672 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Shh sonic hedgehog signaling molecule IMP RGD PMID:8124714 RGD:69996 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Sox11 SRY-box transcription factor 11 ISO
ISS
(MGI:MGI:5285157|PMID:20596238)
GO_REF:0000024
RGD
UniProt
PMID:20596238 GO_REF:0000024, MGI:MGI:5285157 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Sox4 SRY-box transcription factor 4 ISO (MGI:MGI:5285157|PMID:20596238) RGD PMID:20596238 MGI:MGI:5285157 NCBI chr17:37,615,022...37,619,728 JBrowse link
G Stk3 serine/threonine kinase 3 ISO
IEA
MGI:MGI:1929004 (MGI:MGI:4412133|PMID:19786569)
GO_REF:0000107
RGD
Ensembl
PMID:19786569 GO_REF:0000107, MGI:MGI:4412133 NCBI chr 7:73,617,926...73,883,896
Ensembl chr 7:73,618,644...73,883,812
JBrowse link
G Stk4 serine/threonine kinase 4 ISO MGI:MGI:1928487 (MGI:MGI:4412133|PMID:19786569) RGD PMID:19786569 MGI:MGI:4412133 NCBI chr 3:160,467,552...160,546,540
Ensembl chr 3:160,467,552...160,546,540
JBrowse link
G Tctn1 tectonic family member 1 ISO MGI:MGI:3716885 (MGI:MGI:3610767|PMID:16357211) RGD PMID:16357211 MGI:MGI:3610767 NCBI chr12:39,790,948...39,828,215
Ensembl chr12:39,790,965...39,824,064
JBrowse link
G Tulp3 TUB like protein 3 ISO MGI:MGI:2388066 (MGI:MGI:2136130|PMID:11406614) RGD PMID:11406614 MGI:MGI:2136130 NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
JBrowse link
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 ISO MGI:MGI:2668337 (MGI:MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:MGI:4452277 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:1857642 (MGI:MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:MGI:4452277 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
otic vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:95517 (MGI:MGI:2683889|PMID:14623822) RGD PMID:14623822 MGI:MGI:2683889 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf3 fibroblast growth factor 3 ISO MGI:MGI:1099809|MGI:MGI:96604 (MGI:MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:MGI:3720541 NCBI chr 1:218,003,018...218,006,942
Ensembl chr 1:218,003,018...218,006,942
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:MGI:95117 (MGI:MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:MGI:3720541 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:2153790 (MGI:MGI:1197797|PMID:9435295) RGD PMID:9435295 MGI:MGI:1197797 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Hesx1 HESX homeobox 1 ISO MGI:MGI:1931124 (MGI:MGI:1206234|PMID:9620767) RGD PMID:9620767 MGI:MGI:1206234 NCBI chr16:2,616,538...2,636,708
Ensembl chr16:2,634,603...2,636,708
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO
ISS
MGI:MGI:1932522|MGI:MGI:2385468 (MGI:MGI:3795349|PMID:18377888)
GO_REF:0000024
RGD
UniProt
PMID:18377888 GO_REF:0000024, MGI:MGI:3795349 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tcap titin-cap ISO (PMID:9817758) RGD PMID:9817758 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
JBrowse link
otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO
IEA
MGI:MGI:2150426 (MGI:MGI:3702803|PMID:16916509)
GO_REF:0000107
RGD
Ensembl
PMID:16916509 GO_REF:0000107, MGI:MGI:3702803 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Tbx1 T-box transcription factor 1 ISO MGI:MGI:3046793 (MGI:MGI:3703494|PMID:17074316) RGD PMID:17074316 MGI:MGI:3703494 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 ISO MGI:MGI:1918711|MGI:MGI:2135272 (MGI:MGI:4830023|PMID:20704721) RGD PMID:20704721 MGI:MGI:4830023 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO
IBA
MGI:MGI:106613 (MGI:MGI:3624185|PMID:16571627)
PMID:21873635
RGD PMID:16571627, PMID:21873635 MGI:MGI:3624185, RGD:13792537 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 ISO
IBA
MGI:MGI:2135272|MGI:MGI:2429760|MGI:MGI:94941 (MGI:MGI:3624185|PMID:16571627)
PMID:21873635
RGD PMID:16571627, PMID:21873635 MGI:MGI:3624185, RGD:13792537 NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
JBrowse link
G Dvl3 dishevelled segment polarity protein 3 ISO
IBA
MGI:MGI:2135272 (MGI:MGI:3821448|PMID:19008950)
PMID:21873635
RGD PMID:19008950, PMID:21873635 MGI:MGI:3821448, RGD:13792537 NCBI chr11:84,051,177...84,068,479
Ensembl chr11:84,051,078...84,068,302
JBrowse link
G Fzd1 frizzled class receptor 1 ISO
IEA
MGI:MGI:1888513|MGI:MGI:2135272 (MGI:MGI:4837757|PMID:20940229)
GO_REF:0000107
RGD
Ensembl
PMID:20940229 GO_REF:0000107, MGI:MGI:4837757 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Fzd2 frizzled class receptor 2 ISO
IEA
MGI:MGI:1196625|MGI:MGI:2135272 (MGI:MGI:4837757|PMID:20940229)
GO_REF:0000107
RGD
Ensembl
PMID:20940229 GO_REF:0000107, MGI:MGI:4837757 NCBI chr10:90,550,147...90,552,057
Ensembl chr10:90,550,147...90,552,057
JBrowse link
G Grhl3 grainyhead-like transcription factor 3 ISO MGI:MGI:2135272 (MGI:MGI:4819429|PMID:20643356) RGD PMID:20643356 MGI:MGI:4819429 NCBI chr 5:153,893,039...153,925,045
Ensembl chr 5:153,893,039...153,924,896
JBrowse link
G Ptk7 protein tyrosine kinase 7 ISO MGI:MGI:1100883|MGI:MGI:2135272 (MGI:MGI:4830023|PMID:20704721) RGD PMID:20704721 MGI:MGI:4830023 NCBI chr 9:16,662,588...16,729,888
Ensembl chr 9:16,702,460...16,729,030
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO
IEA
MGI:MGI:108078|MGI:MGI:1860298|MGI:MGI:2135272 (MGI:MGI:3793375|PMID:18257070)
GO_REF:0000107
RGD
Ensembl
PMID:18257070 GO_REF:0000107, MGI:MGI:3793375 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:MGI:1860298|MGI:MGI:2135272|MGI:MGI:892014 (MGI:MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:MGI:3793375 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Sfrp5 secreted frizzled-related protein 5 ISO MGI:MGI:108078|MGI:MGI:2135272|MGI:MGI:892014 (MGI:MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:MGI:3793375 NCBI chr 1:261,442,108...261,446,570
Ensembl chr 1:261,442,108...261,446,570
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:106613|MGI:MGI:108078|MGI:MGI:108100|MGI:MGI:1100883|MGI:MGI:1196625|MGI:MGI:1857642|MGI:MGI:1860298|MGI:MGI:1888513|MGI:MGI:1918711|MGI:MGI:2655333|MGI:MGI:892014 (MGI:MGI:3624185|PMID:16571627), (MGI:MGI:3793375|PMID:18257070), (MGI:MGI:3821448|PMID:19008950), (MGI:MGI:4819429|PMID:20643356), (MGI:MGI:4830023|PMID:20704721), (MGI:MGI:4837757|PMID:20940229) RGD PMID:16571627, PMID:18257070, PMID:19008950, PMID:20643356, PMID:20704721, PMID:20940229 MGI:MGI:3624185, MGI:MGI:3793375, MGI:MGI:3821448, MGI:MGI:4819429, MGI:MGI:4830023, MGI:MGI:4837757 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1857617 (MGI:MGI:4830282|PMID:19056682)
GO_REF:0000107
RGD
Ensembl
PMID:19056682 GO_REF:0000107, MGI:MGI:4830282 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 ISO MGI:MGI:2668337 (MGI:MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:MGI:4452277 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:1857642 (MGI:MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:MGI:4452277 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
positive regulation blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (MGI:MGI:5588737|PMID:24863063) RGD PMID:24863063 MGI:MGI:5588737 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Mdk midkine ISS
ISO
GO_REF:0000024
(PMID:19060126)
UniProt
RGD
PMID:19060126 GO_REF:0000024 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Sirt6 sirtuin 6 ISO (PMID:23201774) RGD PMID:23201774 NCBI chr 7:10,937,622...10,943,048
Ensembl chr 7:10,937,599...10,943,063
JBrowse link
positive regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4456940|PMID:17350185)
Ensembl
UniProt
RGD
PMID:17350185 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4456940 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Ctnnb1 catenin beta 1 ISO MGI:MGI:2148567 (MGI:MGI:3801531|PMID:18533146) RGD PMID:18533146 MGI:MGI:3801531 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IMP RGD PMID:8879189 RGD:11087558 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO (PMID:18607644) RGD PMID:18607644 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Agtr1a angiotensin II receptor, type 1a IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr17:35,907,102...35,958,136
Ensembl chr17:35,907,108...35,958,077
JBrowse link
G Agtr1b angiotensin II receptor, type 1b IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 2:105,149,020...105,224,335
Ensembl chr 2:105,149,020...105,224,295
JBrowse link
G Agtr2 angiotensin II receptor, type 2 IMP
ISO
PMID:17537984
(MGI:MGI:3808848|PMID:18607644)
RGD PMID:18607644, PMID:17537984 MGI:MGI:3808848, RGD:1643596 NCBI chr  X:119,389,480...119,393,845
Ensembl chr  X:119,390,013...119,393,842
JBrowse link
G Bmp4 bone morphogenetic protein 4 IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Gdnf glial cell derived neurotrophic factor IMP
IBA
ISO
IEA
IDA
PMID:17537984
PMID:21873635
(PMID:17229286), (PMID:8657307)
(MGI:MGI:5284782|PMID:17229286)
GO_REF:0000107
PMID:17522159
RGD
Ensembl
PMID:8657307, PMID:17229286, PMID:17537984, PMID:21873635, PMID:17522159 GO_REF:0000107, MGI:MGI:5284782, RGD:1643596, RGD:13792537, RGD:8656002 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO MGI:MGI:88180 (MGI:MGI:3714585|PMID:17522159), (MGI:MGI:4949995|PMID:21281623) RGD PMID:17522159, PMID:21281623 MGI:MGI:3714585, MGI:MGI:4949995 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Hoxb7 homeo box B7 ISO (MGI:MGI:3833510|PMID:17881463) RGD PMID:17881463 MGI:MGI:3833510 NCBI chr10:84,135,224...84,138,642
Ensembl chr10:84,135,116...84,138,637
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 ISO (MGI:MGI:5006869|PMID:21523854) RGD PMID:21523854 MGI:MGI:5006869 NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
JBrowse link
G Lhx1 LIM homeobox 1 ISO
ISS
(MGI:MGI:3613206|PMID:16216236)
GO_REF:0000024
RGD
UniProt
PMID:16216236 GO_REF:0000024, MGI:MGI:3613206 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Maged1 MAGE family member D1 ISO (MGI:MGI:3848096|PMID:19268530) RGD PMID:19268530 MGI:MGI:3848096 NCBI chr  X:63,803,194...63,809,715
Ensembl chr  X:63,803,189...63,809,861
JBrowse link
G Nog noggin IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:2446986|PMID:12141440), (MGI:MGI:3714585|PMID:17522159)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12141440, PMID:17522159 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2446986, MGI:MGI:3714585 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
(MGI:MGI:3704067|PMID:17314325), (MGI:MGI:3833510|PMID:17881463), (MGI:MGI:5009394|PMID:17538188)
UniProt
RGD
PMID:17314325, PMID:17538188, PMID:17881463 GO_REF:0000024, MGI:MGI:3704067, MGI:MGI:3833510, MGI:MGI:5009394 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO MGI:MGI:3603818 (MGI:MGI:5563280|PMID:24550112) RGD PMID:24550112 MGI:MGI:5563280 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:MGI:88180 (MGI:MGI:4949995|PMID:21281623), (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925, PMID:21281623 MGI:MGI:4949995, MGI:MGI:5009396 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Smo smoothened, frizzled class receptor IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3611729|PMID:16396903)
Ensembl
UniProt
RGD
PMID:16396903 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3611729 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Sox8 SRY-box transcription factor 8 ISO
ISS
(MGI:MGI:4939090|PMID:21212101)
GO_REF:0000024
RGD
UniProt
PMID:21212101 GO_REF:0000024, MGI:MGI:4939090 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO
ISS
(MGI:MGI:4939090|PMID:21212101)
GO_REF:0000024
RGD
UniProt
PMID:21212101 GO_REF:0000024, MGI:MGI:4939090 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:MGI:3611700|PMID:16291795) RGD PMID:16291795 MGI:MGI:3611700 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Wnt2b Wnt family member 2B ISO (MGI:MGI:2150217|PMID:11507767) RGD PMID:11507767 MGI:MGI:2150217 NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
JBrowse link
positive regulation of endothelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type IMP RGD PMID:10733500 RGD:2313864 NCBI chr10:56,851,734...56,864,049
Ensembl chr10:56,851,734...56,864,005
JBrowse link
G Itgax integrin subunit alpha X ISO (PMID:30873824) RGD PMID:30873824 NCBI chr 1:199,555,560...199,576,948
Ensembl chr 1:199,555,722...199,576,932
JBrowse link
positive regulation of otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stox1 storkhead box 1 ISO (MGI:MGI:5635320|PMID:2567