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ONTOLOGY REPORT - ANNOTATIONS


Term:morphogenesis of an epithelial fold
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Accession:GO:0060571 term browser browse the term
Definition:The morphogenetic process in which an epithelial sheet bends along a linear axis.
Synonyms:exact_synonym: epithelial folding
 related_synonym: folding of an epithelial sheet


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morphogenesis of an epithelial fold term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO
IEA
MGI:MGI:2385927|MGI:MGI:2451025 (MGI:MGI:3718266|PMID:17652515)
GO_REF:0000107
RGD
Ensembl
PMID:17652515 GO_REF:0000107, MGI:MGI:3718266 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Egfr epidermal growth factor receptor ISO MGI:MGI:1856402 (MGI:MGI:74263|PMID:7618084) RGD PMID:7618084 MGI:MGI:74263 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Gdf7 growth differentiation factor 7 ISO MGI:MGI:2387817 (MGI:MGI:1934988|PMID:11356025) RGD PMID:11356025 MGI:MGI:1934988 NCBI chr 6:33,496,596...33,507,626
Ensembl chr 6:33,503,217...33,507,542
JBrowse link
G Hoxd13 homeo box D13 ISO MGI:MGI:1857871 (MGI:MGI:86772|PMID:9097018) RGD PMID:9097018 MGI:MGI:86772 NCBI chr 3:61,590,376...61,593,692
Ensembl chr 3:61,590,376...61,593,692
JBrowse link
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO
IEA
MGI:MGI:3716756 (MGI:MGI:3714080|PMID:17317769)
GO_REF:0000107
RGD
Ensembl
PMID:17317769 GO_REF:0000107, MGI:MGI:3714080 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:MGI:2148567|MGI:MGI:2148569 (MGI:MGI:4360856|PMID:19686689), (MGI:MGI:4361775|PMID:19805295)
Ensembl
RGD
PMID:19686689, PMID:19805295 GO_REF:0000107, MGI:MGI:4360856, MGI:MGI:4361775 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Wnt2 Wnt family member 2 ISO MGI:MGI:1261834 (MGI:MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:MGI:4360856 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
G Wnt2b Wnt family member 2B ISO MGI:MGI:98954 (MGI:MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:MGI:4360856 NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
JBrowse link
mammary gland bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pthlh parathyroid hormone-like hormone ISO MGI:MGI:2154515 (MGI:MGI:1203302|PMID:9477327) RGD PMID:9477327 MGI:MGI:1203302 NCBI chr 4:181,663,425...181,674,181 JBrowse link
mammary gland bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1859647 (MGI:MGI:2155478|PMID:11782400) RGD PMID:11782400 MGI:MGI:2155478 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:2153811 (MGI:MGI:2155478|PMID:11782400) RGD PMID:11782400 MGI:MGI:2155478 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
mammary gland bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sostdc1 sclerostin domain containing 1 ISO MGI:MGI:3604658 (MGI:MGI:5319554|PMID:22509524) RGD PMID:22509524 MGI:MGI:5319554 NCBI chr 6:55,812,820...55,816,994
Ensembl chr 6:55,812,747...55,817,066
JBrowse link
negative regulation of prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
MGI:MGI:1857137 (MGI:MGI:1934513|PMID:11401393), (MGI:MGI:3785350|PMID:18393306)
Ensembl
RGD
PMID:11401393, PMID:18393306 GO_REF:0000107, MGI:MGI:1934513, MGI:MGI:3785350 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (MGI:MGI:3612905|PMID:16324690) RGD PMID:16324690 MGI:MGI:3612905 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Sulf1 sulfatase 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:4941125|PMID:20410206)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20410206 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4941125 NCBI chr 5:5,999,520...6,186,901
Ensembl chr 5:5,999,475...6,186,329
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:1857617 (MGI:MGI:3822053|PMID:18804104)
GO_REF:0000107
RGD
Ensembl
PMID:18804104 GO_REF:0000107, MGI:MGI:3822053 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
neural fold bending term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Luzp1 leucine zipper protein 1 ISO
IBA
IEA
MGI:MGI:3818454 (MGI:MGI:3818102|PMID:18801334)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:18801334, PMID:21873635 GO_REF:0000107, MGI:MGI:3818102, RGD:13792537 NCBI chr 5:154,831,697...154,907,646
Ensembl chr 5:154,868,534...154,907,634
JBrowse link
neural fold elevation formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 ISO UniProtKB:P23359 (MGI:MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:MGI:1332253 NCBI chr 8:82,669,466...82,950,273
Ensembl chr 8:82,878,941...82,950,273
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO UniProtKB:P49003 (MGI:MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:MGI:1332253 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO
IEA
MGI:MGI:1857719 (MGI:MGI:1337194|PMID:10328919)
GO_REF:0000107
RGD
Ensembl
PMID:10328919 GO_REF:0000107, MGI:MGI:1337194 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
neural fold formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cecr2 CECR2, histone acetyl-lysine reader ISO MGI:MGI:3574034 (MGI:MGI:4880797|PMID:21246654) RGD PMID:21246654 MGI:MGI:4880797 NCBI chr 4:153,217,521...153,327,153
Ensembl chr 4:153,217,782...153,322,564
JBrowse link
G Cfl1 cofilin 1 ISO MGI:MGI:3574399 (MGI:MGI:3530675|PMID:15649475) RGD PMID:15649475 MGI:MGI:3530675 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
JBrowse link
G Gatad2a GATA zinc finger domain containing 2A ISO (MGI:MGI:3762244|PMID:17565372) RGD PMID:17565372 MGI:MGI:3762244 NCBI chr16:21,177,793...21,267,768
Ensembl chr16:21,178,138...21,268,504
JBrowse link
G Nodal nodal growth differentiation factor ISO MGI:MGI:2158732 (MGI:MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:MGI:2155575 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Ovol2 ovo-like zinc finger 2 ISO MGI:MGI:3522498 (MGI:MGI:3618450|PMID:16423343) RGD PMID:16423343 MGI:MGI:3618450 NCBI chr 3:138,433,990...138,464,511
Ensembl chr 3:138,433,990...138,462,063
JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox ISO MGI:MGI:2177762 (MGI:MGI:3703395|PMID:16364283) RGD PMID:16364283 MGI:MGI:3703395 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:88064 (MGI:MGI:2673763|PMID:12941620) RGD PMID:12941620 MGI:MGI:2673763 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Gli2 GLI family zinc finger 2 ISO MGI:MGI:1857509 (MGI:MGI:3832153|PMID:16707121) RGD PMID:16707121 MGI:MGI:3832153 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Nog noggin ISO
IEA
MGI:MGI:1862000 (MGI:MGI:3771245|PMID:18028901)
GO_REF:0000107
RGD
Ensembl
PMID:18028901 GO_REF:0000107, MGI:MGI:3771245 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Shh sonic hedgehog signaling molecule NOT ISO MGI:MGI:88064 (MGI:MGI:3037217|PMID:15013801) RGD PMID:15013801 MGI:MGI:3037217 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Tp63 tumor protein p63 ISO MGI:MGI:1934269 (MGI:MGI:1928010|PMID:11106548) RGD PMID:11106548 MGI:MGI:1928010 NCBI chr11:78,234,853...78,456,559
Ensembl chr11:78,234,800...78,456,501
JBrowse link
regulation of prostatic bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO MGI:MGI:1099809 (MGI:MGI:2673763|PMID:12941620) RGD PMID:12941620 MGI:MGI:2673763 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
(MGI:MGI:2386799|PMID:12221011), (MGI:MGI:3785350|PMID:18393306)
Ensembl
RGD
PMID:12221011, PMID:18393306 GO_REF:0000107, MGI:MGI:2386799, MGI:MGI:3785350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    developmental process 6827
      anatomical structure morphogenesis 2877
        tissue morphogenesis 698
          morphogenesis of an epithelium 586
            morphogenesis of an epithelial fold 29
              invagination involved in gastrulation with mouth forming second 0
              involution involved in gastrulation with mouth forming second 0
              morphogenesis of an epithelial bud + 18
              morphogenesis of an epithelial fold involved in embryonic heart tube formation + 0
              myocardial epithelial involution involved in heart jogging 0
              neural fold bending + 1
              neural fold folding 0
              neural fold formation + 9
              posterior midgut invagination 0
              pouch outgrowth involved in semicircular canal formation 0
Path 2
Term Annotations click to browse term
  biological_process 20028
    developmental process 6827
      anatomical structure development 6269
        anatomical structure morphogenesis 2877
          tissue morphogenesis 698
            morphogenesis of an epithelium 586
              morphogenesis of an epithelial fold 29
                invagination involved in gastrulation with mouth forming second 0
                involution involved in gastrulation with mouth forming second 0
                morphogenesis of an epithelial bud + 18
                morphogenesis of an epithelial fold involved in embryonic heart tube formation + 0
                myocardial epithelial involution involved in heart jogging 0
                neural fold bending + 1
                neural fold folding 0
                neural fold formation + 9
                posterior midgut invagination 0
                pouch outgrowth involved in semicircular canal formation 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.