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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of chromosome condensation
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Accession:GO:0060623 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of chromosome condensation, the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells.


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regulation of chromosome condensation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1 cyclin B1 IMP positive regulation RGD PMID:15291744 RGD:1578405 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Mcph1 microcephalin 1 ISO MGI:MGI:4332146 (MGI:MGI:4437500|PMID:20169082) RGD PMID:20169082 MGI:MGI:4437500 NCBI chr16:75,904,087...76,110,624
Ensembl chr16:75,904,006...76,110,553
JBrowse link
G Wapl WAPL cohesin release factor ISO
IBA
MGI:MGI:5551791|MGI:MGI:5551807 (MGI:MGI:5544860|PMID:23975099)
PMID:21873635
RGD PMID:23975099, PMID:21873635 MGI:MGI:5544860, RGD:13792537 NCBI chr16:11,029,325...11,108,867
Ensembl chr16:11,032,531...11,106,589
JBrowse link
negative regulation of chromosome condensation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H3f3a H3 histone family member 3A ISO MGI:MGI:1101768 (MGI:MGI:5502235|PMID:23903189) RGD PMID:23903189 MGI:MGI:5502235 NCBI chr13:99,091,246...99,102,828
Ensembl chr13:99,091,763...99,101,208
JBrowse link
G H3f3b H3 histone family member 3B ISO MGI:MGI:1097686 (MGI:MGI:5502235|PMID:23903189) RGD PMID:23903189 MGI:MGI:5502235 NCBI chr10:104,573,666...104,575,890
Ensembl chr10:104,573,664...104,575,890
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    cellular process 18791
      regulation of cellular process 12570
        regulation of cellular component organization 2609
          regulation of organelle organization 1388
            regulation of chromosome organization 380
              regulation of chromosome condensation 5
                negative regulation of chromosome condensation + 2
                positive regulation of chromosome condensation + 0
                regulation of mitotic chromosome condensation + 0
Path 2
Term Annotations click to browse term
  biological_process 20017
    cellular process 18791
      cellular component organization or biogenesis 6765
        cellular component organization 6509
          organelle organization 4072
            chromosome organization 1250
              DNA conformation change 312
                DNA packaging 215
                  chromosome condensation 46
                    regulation of chromosome condensation 5
                      negative regulation of chromosome condensation + 2
                      positive regulation of chromosome condensation + 0
                      regulation of mitotic chromosome condensation + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.