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ONTOLOGY REPORT - ANNOTATIONS


Term:spongiotrophoblast layer development
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Accession:GO:0060712 term browser browse the term
Definition:The process in which the spongiotrophoblast layer of the placenta progresses from its formation to its mature state.


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spongiotrophoblast layer development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin ISO MGI:2176598 (MGI:3689296|PMID:16981008) RGD PMID:16981008 MGI:3689296 NCBI chr 1:175,443,189...175,447,260
Ensembl chr 1:175,445,088...175,447,259
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 ISO (PMID:12917334) RGD PMID:12917334 NCBI chr 1:216,154,002...216,156,409
Ensembl chr 1:216,154,002...216,156,409
JBrowse link
G Birc6 baculoviral IAP repeat-containing 6 ISO MGI:3512417 (MGI:3511408|PMID:15485903) RGD PMID:15485903 MGI:3511408 NCBI chr 6:21,900,763...22,092,484
Ensembl chr 6:21,950,100...22,092,346
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 ISO MGI:3028946 (MGI:3027297|PMID:14673158) RGD PMID:14673158 MGI:3027297 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692
JBrowse link
G Fbxw8 F-box and WD repeat domain containing 8 ISO MGI:3665136 (MGI:3653956|PMID:16880526) RGD PMID:16880526 MGI:3653956 NCBI chr12:44,046,204...44,138,138
Ensembl chr12:44,046,217...44,138,138
JBrowse link
G Senp2 SUMO specific peptidase 2 ISO MGI:3832730 (MGI:3831588|PMID:19090619) RGD PMID:19090619 MGI:3831588 NCBI chr11:82,627,973...82,664,702
Ensembl chr11:82,630,436...82,664,630
JBrowse link
G Zfat zinc finger and AT hook domain containing ISO MGI:4829941 (MGI:4822499|PMID:20660741) RGD PMID:20660741 MGI:4822499 NCBI chr 7:109,037,777...109,207,511
Ensembl chr 7:109,037,845...109,205,354
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 ISO MGI:3050540 (MGI:3047495|PMID:15226444) RGD PMID:15226444 MGI:3047495 NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074
JBrowse link
glycogen cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO MGI:2675202 (MGI:2673047|PMID:12783884) RGD PMID:12783884 MGI:2673047 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
regulation of spongiotrophoblast cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrk Nik related kinase ISO MGI:5292103 (MGI:5287920|PMID:21715335) RGD PMID:21715335 MGI:5287920 NCBI chr  X:109,940,439...110,036,361
NCBI chr  X:110,065,199...110,089,124
Ensembl chr  X:109,940,350...110,033,085
JBrowse link
G Phlda2 pleckstrin homology-like domain, family A, member 2 ISO MGI:2181542 (MGI:5749303|PMID:26476147) RGD PMID:26476147 MGI:5749303 NCBI chr 1:216,701,345...216,704,479
Ensembl chr 1:216,702,319...216,703,534
JBrowse link
spongiotrophoblast cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2 insulin-like growth factor 2 IEA
ISO
GO_REF:0000107
(MGI:5424276|PMID:22562201)
Ensembl
RGD
PMID:22562201 GO_REF:0000107, MGI:5424276 NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911
JBrowse link
spongiotrophoblast differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 ISO MGI:2153832 (MGI:1097723|PMID:9331331) RGD PMID:9331331 MGI:1097723 NCBI chr 1:216,154,002...216,156,409
Ensembl chr 1:216,154,002...216,156,409
JBrowse link
G Gjb5 gap junction protein, beta 5 ISO MGI:3769388 (MGI:3768289|PMID:17961533) RGD PMID:17961533 MGI:3768289 NCBI chr 5:145,422,034...145,440,558
Ensembl chr 5:145,422,357...145,423,172
JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 ISO MGI:2137552 (MGI:5604339|PMID:24855001) RGD PMID:24855001 MGI:5604339 NCBI chr 6:72,509,658...72,596,285
Ensembl chr 6:72,510,255...72,596,446
JBrowse link
G Lif LIF, interleukin 6 family cytokine IEA
ISO
GO_REF:0000107
MGI:1201791 (MGI:3609466|PMID:16258063)
Ensembl
RGD
PMID:16258063 GO_REF:0000107, MGI:3609466 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Socs3 suppressor of cytokine signaling 3 IEA
ISO
GO_REF:0000107
MGI:2180861|MGI:96787 (MGI:3609466|PMID:16258063)
Ensembl
RGD
PMID:16258063 GO_REF:0000107, MGI:3609466 NCBI chr10:106,973,863...106,976,969
Ensembl chr10:106,975,178...106,976,040
JBrowse link
spongiotrophoblast layer developmental growth term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plac1 placenta enriched 1 ISO MGI:3808477 (MGI:5432627|PMID:22729990) RGD PMID:22729990 MGI:5432627 NCBI chr  X:157,931,450...158,133,506
Ensembl chr  X:158,569,056...158,569,577
Ensembl chr  X:158,569,056...158,569,577
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    reproductive process 1798
      developmental process involved in reproduction 1189
        embryonic placenta development 110
          spongiotrophoblast layer development 17
            glycogen cell differentiation involved in embryonic placenta development 1
            spongiotrophoblast differentiation 5
            spongiotrophoblast layer developmental growth + 4
Path 2
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure development 6268
        multicellular organism development 5743
          system development 5279
            reproductive system development 593
              reproductive structure development 588
                placenta development 195
                  embryonic placenta development 110
                    spongiotrophoblast layer development 17
                      glycogen cell differentiation involved in embryonic placenta development 1
                      spongiotrophoblast differentiation 5
                      spongiotrophoblast layer developmental growth + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.