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ONTOLOGY REPORT - ANNOTATIONS


Term:hepaticobiliary system development
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Accession:GO:0061008 term browser browse the term
Definition:The progression of the hepaticobiliary system over time, from its formation to the mature structure. The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins.
Synonyms:exact_synonym: hepatobiliary system development


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common bile duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor ISO (MGI:MGI:3794480|PMID:16443691) RGD PMID:16443691 MGI:MGI:3794480 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO
IEA
MGI:MGI:2149672 (MGI:MGI:4355651|PMID:19619492)
GO_REF:0000107
RGD
Ensembl
PMID:19619492 GO_REF:0000107, MGI:MGI:4355651 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hhex hematopoietically expressed homeobox ISO MGI:MGI:3721426 (MGI:MGI:3720549|PMID:17580084) RGD PMID:17580084 MGI:MGI:3720549 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
G Mks1 MKS transition zone complex subunit 1 ISO
IEA
MGI:MGI:4410614 (MGI:MGI:4367169|PMID:19776033)
GO_REF:0000107
RGD
Ensembl
PMID:19776033 GO_REF:0000107, MGI:MGI:4367169 NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO (MGI:MGI:4421275|PMID:19913509) RGD PMID:19913509 MGI:MGI:4421275 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:120,278,605...120,367,829
Ensembl chr 2:120,278,605...120,316,600
JBrowse link
G Ccdc40 coiled-coil domain containing 40 ISO (PMID:22693285) RGD PMID:22693285 NCBI chr10:108,055,270...108,393,408
Ensembl chr10:108,340,240...108,372,862
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 ISO
IEA
(PMID:19944405)
GO_REF:0000107
RGD
Ensembl
PMID:19944405 GO_REF:0000107 NCBI chr19:52,217,427...52,245,930
Ensembl chr19:52,217,984...52,245,929
JBrowse link
G Nphp3 nephrocystin 3 ISO (PMID:20007846) RGD PMID:20007846 NCBI chr 8:112,526,553...112,575,745
Ensembl chr 8:112,526,553...112,575,745
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:21719175) RGD PMID:21719175 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link
G Zic3 Zic family member 3 ISO (PMID:9354794) RGD PMID:9354794 NCBI chr  X:140,875,191...140,888,344
Ensembl chr  X:140,878,216...140,888,795
JBrowse link
gall bladder development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox ISO MGI:MGI:3721426 (MGI:MGI:3720549|PMID:17580084) RGD PMID:17580084 MGI:MGI:3720549 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO (PMID:19242925) RGD PMID:19242925 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO MGI:MGI:2179440 (MGI:MGI:4421275|PMID:19913509) RGD PMID:19913509 MGI:MGI:4421275 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
hepatic duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox ISO MGI:MGI:3721426 (MGI:MGI:3720549|PMID:17580084) RGD PMID:17580084 MGI:MGI:3720549 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
hepatoblast differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:14,019,723...14,045,781
Ensembl chr20:14,019,723...14,025,068
JBrowse link
G Hhex hematopoietically expressed homeobox ISO MGI:MGI:3721426 (MGI:MGI:3720549|PMID:17580084) RGD PMID:17580084 MGI:MGI:3720549 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:3807614|PMID:18635606) RGD PMID:18635606 MGI:MGI:3807614 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
hepatocyte differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:11668598, PMID:21873635 RGD:2306909, RGD:13792537 NCBI chr 1:237,893,983...237,910,002
Ensembl chr 1:237,893,966...237,910,012
JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP RGD PMID:12939595 RGD:4144098 NCBI chr 9:74,113,437...74,236,274
Ensembl chr 9:74,124,016...74,236,274
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:17574236 RGD:2306655 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
JBrowse link
G E2f7 E2F transcription factor 7 ISO
ISS
(MGI:MGI:5449497|PMID:23064266)
GO_REF:0000024
RGD
UniProt
PMID:23064266 GO_REF:0000024, MGI:MGI:5449497 NCBI chr 7:53,275,659...53,318,261
Ensembl chr 7:53,275,676...53,316,481
JBrowse link
G E2f8 E2F transcription factor 8 IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:5449497|PMID:23064266), (MGI:MGI:5449498|PMID:23064264)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23064264, PMID:23064266 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5449497, MGI:MGI:5449498 NCBI chr 1:104,185,436...104,203,683
Ensembl chr 1:104,187,100...104,202,591
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:14,019,723...14,045,781
Ensembl chr20:14,019,723...14,025,068
JBrowse link
G Hhex hematopoietically expressed homeobox ISO MGI:MGI:2448661 (MGI:MGI:1891782|PMID:11027604) RGD PMID:11027604 MGI:MGI:1891782 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
G Hnf1b HNF1 homeobox B IEP RGD PMID:18286537 RGD:2312718 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IEP
IEA
GO_REF:0000002 InterPro PMID:19621519 GO_REF:0000002, RGD:12904750 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003
JBrowse link
G Itga2 integrin subunit alpha 2 IEP RGD PMID:16458388 RGD:2307397 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Krt18 keratin 18 IEP RGD PMID:24340101, PMID:28941653 RGD:27226712, RGD:27226713 NCBI chr 7:143,629,455...143,633,131
Ensembl chr 7:143,629,455...143,633,131
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:171,213,936...171,219,885
Ensembl chr 3:171,213,936...171,219,871
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:34,216,735...34,224,357
Ensembl chr15:34,216,833...34,224,193
JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:15232737) RGD PMID:15232737 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 ISO MGI:MGI:2176946|MGI:MGI:3606185 (MGI:MGI:3806427|PMID:18722179) RGD PMID:18722179 MGI:MGI:3806427 NCBI chr 1:170,585,160...170,586,428
Ensembl chr 1:170,585,167...170,586,603
JBrowse link
G Wnt1 Wnt family member 1 IMP RGD PMID:20413689 RGD:2326223 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
hepatocyte proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpb CCAAT/enhancer binding protein beta IDA
ISO
PMID:10635333
(MGI:MGI:3778721|PMID:10635333)
RGD PMID:10635333, PMID:10635333 MGI:MGI:3778721, RGD:10047310 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Fgl1 fibrinogen-like 1 ISS
ISO
GO_REF:0000024
(PMID:19880967)
UniProt
RGD
PMID:19880967 GO_REF:0000024 NCBI chr16:54,153,086...54,188,120
Ensembl chr16:54,153,054...54,188,181
JBrowse link
G Il6 interleukin 6 ISS
ISO
GO_REF:0000024
(MGI:MGI:84432|PMID:8910279)
UniProt
RGD
PMID:8910279 GO_REF:0000024, MGI:MGI:84432 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Mki67 marker of proliferation Ki-67 ISO (MGI:MGI:5616947|PMID:25446530) RGD PMID:25446530 MGI:MGI:5616947 NCBI chr 1:207,993,895...208,020,454
Ensembl chr 1:207,993,895...208,020,454
JBrowse link
G Notch2 notch receptor 2 ISO
IEA
MGI:MGI:3617328 (MGI:MGI:5616947|PMID:25446530)
GO_REF:0000107
RGD
Ensembl
PMID:25446530 GO_REF:0000107, MGI:MGI:5616947 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IEP RGD PMID:29138817 RGD:15042871 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
G Prox1 prospero homeobox 1 ISO MGI:MGI:2386336 (MGI:MGI:1860507|PMID:10888866) RGD PMID:10888866 MGI:MGI:1860507 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Rps6ka1 ribosomal protein S6 kinase A1 ISO
ISS
(MGI:MGI:3778721|PMID:10635333)
GO_REF:0000024
RGD
UniProt
PMID:10635333 GO_REF:0000024, MGI:MGI:3778721 NCBI chr 5:152,078,217...152,122,684
Ensembl chr 5:152,078,220...152,122,684
JBrowse link
G Tgfa transforming growth factor alpha IDA
ISO
PMID:10635333
(MGI:MGI:3778721|PMID:10635333)
RGD PMID:10635333, PMID:10635333 MGI:MGI:3778721, RGD:10047310 NCBI chr 4:117,961,877...118,045,923
Ensembl chr 4:117,962,319...118,046,344
JBrowse link
intrahepatic bile duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gak cyclin G associated kinase ISO MGI:MGI:2176228|MGI:MGI:5305733 (MGI:MGI:5305417|PMID:18434600) RGD PMID:18434600 MGI:MGI:5305417 NCBI chr14:2,100,104...2,174,332
Ensembl chr14:2,100,106...2,174,318
JBrowse link
G Notch2 notch receptor 2 ISO
IEA
MGI:MGI:3617328 (MGI:MGI:5616947|PMID:25446530)
GO_REF:0000107
RGD
Ensembl
PMID:25446530 GO_REF:0000107, MGI:MGI:5616947 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:MGI:2177602|MGI:MGI:2385468 (MGI:MGI:3852603|PMID:19403103) RGD PMID:19403103 MGI:MGI:3852603 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
liver development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aacs acetoacetyl-CoA synthetase IDA RGD PMID:10513626 RGD:2301023 NCBI chr12:36,512,393...36,555,694
Ensembl chr12:36,512,393...36,555,694
JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain ISO
IEA
MGI:MGI:3692446 (MGI:MGI:3692159|PMID:16121256)
GO_REF:0000107
RGD
Ensembl
PMID:16121256 GO_REF:0000107, MGI:MGI:3692159 NCBI chr 2:260,124,418...260,148,589
Ensembl chr 2:260,124,418...260,148,589
JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 IEP RGD PMID:5166591 RGD:2326169 NCBI chr 8:58,166,990...58,195,884
Ensembl chr 8:58,166,990...58,195,884
JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 IEP RGD PMID:5166591 RGD:2326169 NCBI chr 1:47,972,399...47,992,654
Ensembl chr 1:47,972,399...47,992,653
JBrowse link
G Aco1 aconitase 1 IEP RGD PMID:755797 RGD:11552585 NCBI chr 5:56,425,076...56,481,218
Ensembl chr 5:56,425,024...56,481,218
JBrowse link
G Aco2 aconitase 2 IEP RGD PMID:755797 RGD:11552585 NCBI chr 7:123,102,493...123,145,608
Ensembl chr 7:123,102,468...123,145,635
JBrowse link
G Ada adenosine deaminase ISO MGI:MGI:1857117|MGI:MGI:2155977 (MGI:MGI:72798|PMID:7731963), (MGI:MGI:74163|PMID:7670465) RGD PMID:7670465, PMID:7731963 MGI:MGI:72798, MGI:MGI:74163 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Adrb2 adrenoceptor beta 2 IEP RGD PMID:8408243 RGD:8548535 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
JBrowse link
G Afp alpha-fetoprotein IEP RGD PMID:16822301 RGD:2292045 NCBI chr14:19,141,755...19,159,919
Ensembl chr14:19,141,755...19,159,923
JBrowse link
G Ahr aryl hydrocarbon receptor ISO (MGI:MGI:1889403|PMID:10973493), (MGI:MGI:3794480|PMID:16443691), (MGI:MGI:72762|PMID:7732381), (MGI:MGI:81320|PMID:8692887) RGD PMID:7732381, PMID:8692887, PMID:10973493, PMID:16443691 MGI:MGI:1889403, MGI:MGI:3794480, MGI:MGI:72762, MGI:MGI:81320 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Ak2 adenylate kinase 2 IEP RGD PMID:5123889 RGD:5490208 NCBI chr 5:147,185,474...147,204,050
Ensembl chr 5:147,185,474...147,204,050
JBrowse link
G Ak3 adenylate kinase 3 IEP RGD PMID:5123889 RGD:5490208 NCBI chr 1:247,144,486...247,169,690
Ensembl chr 1:247,144,491...247,169,693
JBrowse link
G Ak4 adenylate kinase 4 IEP RGD PMID:9813319 RGD:632174 NCBI chr 5:120,250,318...120,309,153
Ensembl chr 5:120,250,616...120,305,897
JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 IEP RGD PMID:14729401 RGD:1643117 NCBI chr 1:238,222,689...238,264,381
Ensembl chr 1:238,222,521...238,264,330
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 IEP RGD PMID:14729401 RGD:1643117 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member IEP RGD PMID:16291827 RGD:2300311 NCBI chr12:40,466,418...40,498,813
Ensembl chr12:40,466,495...40,498,752
JBrowse link
G Aldh9a1 aldehyde dehydrogenase 9 family, member A1 IEP RGD PMID:19150623 RGD:2313411 NCBI chr13:85,580,828...85,597,497
Ensembl chr13:85,580,828...85,597,493
JBrowse link
G Aldob aldolase, fructose-bisphosphate B IEP RGD PMID:8641049 RGD:2313428 NCBI chr 5:64,805,772...64,818,813
Ensembl chr 5:64,805,773...64,818,824
JBrowse link
G Ang angiogenin IEP RGD PMID:2440105 RGD:2325721 NCBI chr15:28,022,926...28,028,636 JBrowse link
G Arf6 ADP-ribosylation factor 6 ISO MGI:MGI:3662650 (MGI:MGI:3653957|PMID:16880525) RGD PMID:16880525 MGI:MGI:3653957 NCBI chr 6:91,697,109...91,698,257
Ensembl chr 6:91,697,109...91,698,255
JBrowse link
G Arg1 arginase 1 IEP RGD PMID:8690412 RGD:4144072 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Asl argininosuccinate lyase IEP
IDA
DNA:increased methylation:5' utr RGD PMID:10473900, PMID:9535537 RGD:1599266, RGD:1599268 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) IEP RGD PMID:237754 RGD:2316008 NCBI chr 4:33,742,876...33,761,106
Ensembl chr 4:33,743,364...33,761,163
JBrowse link
G Ass1 argininosuccinate synthase 1 IEP RGD PMID:10473900, PMID:9395312 RGD:1599266, RGD:4139912 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Atg7 autophagy related 7 ISO MGI:MGI:2176073|MGI:MGI:3587769 (MGI:MGI:3587473|PMID:15866887) RGD PMID:15866887 MGI:MGI:3587473 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Atp5f1b ATP synthase F1 subunit beta IEP RGD PMID:8420961 RGD:13792579 NCBI chr 7:2,504,708...2,511,748
Ensembl chr 7:2,504,695...2,511,749
JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:25349135 RGD:11341669 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
G Baat bile acid CoA:amino acid N-acyltransferase IEP RGD PMID:7575455 RGD:69770 NCBI chr 5:64,768,397...64,777,368
Ensembl chr 5:64,768,401...64,777,368
JBrowse link
G Bdh1 3-hydroxybutyrate dehydrogenase 1 IEP RGD PMID:2806552 RGD:4105456 NCBI chr11:72,577,547...72,619,435
Ensembl chr11:72,578,533...72,614,176
JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IEP RGD PMID:14160653 RGD:2303538 NCBI chr 6:26,657,507...26,680,459
Ensembl chr 6:26,657,780...26,680,284
JBrowse link
G Cadm1 cell adhesion molecule 1 IMP RGD PMID:17326163 RGD:2289097 NCBI chr 8:51,858,906...52,200,591
Ensembl chr 8:52,127,399...52,189,722
JBrowse link
G Cast calpastatin IEP RGD PMID:16871587 RGD:5683869 NCBI chr 2:1,452,111...1,561,669
Ensembl chr 2:1,452,116...1,561,464
JBrowse link
G Ccnd1 cyclin D1 IEP RGD PMID:15809057 RGD:1582338 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Ccnd2 cyclin D2 IEP RGD PMID:15809057 RGD:1582338 NCBI chr 4:159,674,885...159,697,207
Ensembl chr 4:159,674,885...159,697,207
JBrowse link
G Ccne1 cyclin E1 IEP RGD PMID:15809057 RGD:1582338 NCBI chr 1:94,485,830...94,495,112
Ensembl chr 1:94,485,832...94,494,980
JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:MGI:6284072|PMID:30635284)
UniProt
Ensembl
RGD
PMID:30635284 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6284072 NCBI chr10:84,780,644...84,789,800
Ensembl chr10:84,780,608...84,789,832
JBrowse link
G Cdkn2b cyclin-dependent kinase inhibitor 2B IEP RGD PMID:11042273 RGD:7248763 NCBI chr 5:107,834,353...107,857,428
Ensembl chr 5:107,845,951...107,858,104
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha IEP
ISO
ISS
IEA
MGI:MGI:2177068 (MGI:MGI:3688957|PMID:17021047), (MGI:MGI:83240|PMID:8798745)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:8798745, PMID:17021047, PMID:16172914 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3688957, MGI:MGI:83240, RGD:1625368 NCBI chr 1:91,363,492...91,366,164
Ensembl chr 1:91,363,492...91,366,164
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IEP RGD PMID:1377818 RGD:69946 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma IEP PMID:1377818 UniProt PMID:1377818 RGD:69946 NCBI chr 1:91,286,956...91,297,459
Ensembl chr 1:91,287,917...91,296,656
JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 ISO MGI:MGI:2179530 (MGI:MGI:1346729|PMID:10521397) RGD PMID:10521397 MGI:MGI:1346729 NCBI chr 9:41,045,352...41,051,979
Ensembl chr 9:41,045,363...41,052,024
JBrowse link
G Chek1_v2 checkpoint kinase 1, variant 2 IEP RGD PMID:11687578 RGD:70230
G Cit citron rho-interacting serine/threonine kinase IEP RGD PMID:12411428 RGD:628497 NCBI chr12:46,334,669...46,494,152
Ensembl chr12:46,334,665...46,494,174
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO MGI:MGI:2385355 (MGI:MGI:3813432|PMID:17932483), (MGI:MGI:3847632|PMID:17644732) RGD PMID:17644732, PMID:17932483 MGI:MGI:3813432, MGI:MGI:3847632 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Cobl cordon-bleu WH2 repeat protein ISO
IEA
(PMID:7586755)
GO_REF:0000107
RGD
Ensembl
PMID:7586755 GO_REF:0000107 NCBI chr14:92,341,949...92,497,169
Ensembl chr14:92,342,957...92,577,936
JBrowse link
G Cp ceruloplasmin IEP RGD PMID:2332446 RGD:728241 NCBI chr 2:104,744,249...104,803,034
Ensembl chr 2:104,744,461...104,799,853
JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP RGD PMID:8690412 RGD:4144072 NCBI chr 9:74,113,437...74,236,274
Ensembl chr 9:74,124,016...74,236,274
JBrowse link
G Ctnnb1 catenin beta 1 IEP RGD PMID:17236583 RGD:1599633 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:12162855 RGD:727721 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
JBrowse link
G Cyp2d3 cytochrome P450, family 2, subfamily d, polypeptide 3 IEP RGD PMID:9929501 RGD:2301678 NCBI chr 7:123,634,400...123,638,757
Ensembl chr 7:123,625,590...123,638,765
JBrowse link
G Dbp D-box binding PAR bZIP transcription factor IEP RGD PMID:2331750 RGD:727680 NCBI chr 1:101,687,896...101,692,845
Ensembl chr 1:101,687,855...101,692,846
JBrowse link
G Ddx39b DExD-box helicase 39B IEP RGD PMID:1618789 RGD:632224 NCBI chr20:4,806,103...4,818,600
Ensembl chr20:4,806,108...4,818,568
JBrowse link
G Dut deoxyuridine triphosphatase IEP RGD PMID:11121581 RGD:5133681 NCBI chr 3:117,514,399...117,525,450
Ensembl chr 3:117,514,444...117,525,446
JBrowse link
G Egfr epidermal growth factor receptor IEP RGD PMID:12454858 RGD:2289959 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:10231554 RGD:13204733 NCBI chr 1:21,748,201...21,813,205
Ensembl chr 1:21,748,261...21,813,371
JBrowse link
G Ep300 E1A binding protein p300 IEP RGD PMID:15598887 RGD:1581923 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Ephx1 epoxide hydrolase 1 IEP RGD PMID:2469391 RGD:4889418 NCBI chr13:99,271,390...99,300,580
Ensembl chr13:99,271,366...99,300,579
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IEP RGD PMID:12454858 RGD:2289959 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728
JBrowse link
G Foxm1 forkhead box M1 ISO MGI:MGI:3522201 (MGI:MGI:3522012|PMID:15531365) RGD PMID:15531365 MGI:MGI:3522012 NCBI chr 4:161,685,236...161,697,633
Ensembl chr 4:161,685,258...161,696,305
JBrowse link
G Fpgs folylpolyglutamate synthase IEP RGD PMID:1435744 RGD:2315102 NCBI chr 3:11,717,667...11,729,694
Ensembl chr 3:11,717,667...11,723,327
JBrowse link
G Fscn1 fascin actin-bundling protein 1 IEP RGD PMID:18855019 RGD:2317768 NCBI chr12:13,655,459...13,668,595
Ensembl chr12:13,656,554...13,668,515
JBrowse link
G Gata6 GATA binding protein 6 ISO
IEA
MGI:MGI:3576383 (MGI:MGI:3575862|PMID:15767668)
GO_REF:0000107
RGD
Ensembl
PMID:15767668 GO_REF:0000107, MGI:MGI:3575862 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Gfer growth factor, augmenter of liver regeneration IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:14,059,347...14,061,703
Ensembl chr10:14,059,347...14,061,703
JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 IEP RGD PMID:3996734 RGD:2302171 NCBI chr15:19,721,292...19,734,032
Ensembl chr15:19,721,293...19,733,967
JBrowse link
G H19 H19, imprinted maternally expressed transcript (non-protein coding) IEP RGD PMID:8981228 RGD:1342456 NCBI chr 1:215,744,404...215,747,080 JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO
IEA
MGI:MGI:2149672 (MGI:MGI:3525024|PMID:15578515)
GO_REF:0000107
RGD
Ensembl
PMID:15578515 GO_REF:0000107, MGI:MGI:3525024 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hgf hepatocyte growth factor ISO (MGI:MGI:3653957|PMID:16880525) RGD PMID:16880525 MGI:MGI:3653957 NCBI chr 4:15,435,460...15,505,377
Ensembl chr 4:15,433,295...15,505,362
JBrowse link
G Hhex hematopoietically expressed homeobox ISO MGI:MGI:2177762|MGI:MGI:2448661|MGI:MGI:2449914 (MGI:MGI:1855906|PMID:10804184), (MGI:MGI:1891782|PMID:11027604), (MGI:MGI:3487182|PMID:15459110), (MGI:MGI:3703395|PMID:16364283) RGD PMID:10804184, PMID:11027604, PMID:15459110, PMID:16364283 MGI:MGI:1855906, MGI:MGI:1891782, MGI:MGI:3487182, MGI:MGI:3703395 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
G Hlx H2.0-like homeobox ISO MGI:MGI:2182089 (MGI:MGI:79044|PMID:8557196) RGD PMID:8557196 MGI:MGI:79044 NCBI chr13:102,637,967...102,643,376
Ensembl chr13:102,637,769...102,643,223
JBrowse link
G Hmbs hydroxymethylbilane synthase IDA RGD PMID:971328 RGD:25394583 NCBI chr 8:48,667,278...48,674,673
Ensembl chr 8:48,667,275...48,674,748
JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase IEP RGD PMID:13990 RGD:2326149 NCBI chr 5:154,294,841...154,308,582
Ensembl chr 5:154,294,806...154,308,640
JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 IEP RGD PMID:5166591 RGD:2326169 NCBI chr 2:52,427,351...52,445,082
Ensembl chr 2:52,431,601...52,445,055
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:8620869 RGD:2326125 NCBI chr 2:200,452,623...200,480,785
Ensembl chr 2:200,452,624...200,479,423
JBrowse link
G Hnf1a HNF1 homeobox A ISO MGI:MGI:2384429 (MGI:MGI:1202489|PMID:9566924) RGD PMID:9566924 MGI:MGI:1202489 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Hnf1b HNF1 homeobox B ISO
IEA
MGI:MGI:1857856 (MGI:MGI:3807614|PMID:18635606)
GO_REF:0000002
RGD
InterPro
PMID:18635606 GO_REF:0000002, MGI:MGI:3807614 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IEP RGD PMID:20102719 RGD:10042969 NCBI chr14:11,256,163...11,274,684
Ensembl chr14:11,256,268...11,274,578
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:16488668 RGD:10002779 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Hp haptoglobin IDA RGD PMID:16172914 RGD:1625368 NCBI chr19:42,096,255...42,100,805
Ensembl chr19:42,097,995...42,100,804
JBrowse link
G Hras HRas proto-oncogene, GTPase IEP RGD PMID:2581126 RGD:14694813 NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686
JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase ISO MGI:MGI:2183607 (MGI:MGI:2182507|PMID:12105862) RGD PMID:12105862 MGI:MGI:2182507 NCBI chr 5:169,475,270...169,482,031
Ensembl chr 5:169,475,270...169,482,030
JBrowse link
G Ift88 intraflagellar transport 88 ISO MGI:MGI:2157527 (MGI:MGI:2155922|PMID:11773599), (MGI:MGI:892192|PMID:9176412) RGD PMID:9176412, PMID:11773599 MGI:MGI:2155922, MGI:MGI:892192 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
JBrowse link
G Igf2r insulin-like growth factor 2 receptor IDA RGD PMID:12127995 RGD:2311626 NCBI chr 1:48,176,095...48,264,482
Ensembl chr 1:48,176,106...48,264,477
JBrowse link
G Insr insulin receptor IEP RGD PMID:6364984 RGD:14701029 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 ISO MGI:MGI:1856923 (MGI:MGI:1096257|PMID:9376320) RGD PMID:9376320 MGI:MGI:1096257 NCBI chr17:20,183,440...20,365,219
Ensembl chr17:20,184,245...20,364,714
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO MGI:MGI:2149630 (MGI:MGI:1338596|PMID:10352021) RGD PMID:10352021 MGI:MGI:1338596 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Klf1 Kruppel like factor 1 ISO MGI:MGI:1857557 (MGI:MGI:73364|PMID:7753194) RGD PMID:7753194 MGI:MGI:73364 NCBI chr19:26,016,289...26,019,557
Ensembl chr19:26,016,382...26,019,553
JBrowse link
G Kras KRAS proto-oncogene, GTPase IEP RGD PMID:1526114 RGD:11060153 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Lbp lipopolysaccharide binding protein IEP RGD PMID:20978830 RGD:9685195 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464
JBrowse link
G Lipc lipase C, hepatic type IEP RGD PMID:11004003 RGD:2307448 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G LOC100912596 FAD-linked sulfhydryl oxidase ALR-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Lsr lipolysis stimulated lipoprotein receptor ISO
ISS
(MGI:MGI:3052428|PMID:15265030)
GO_REF:0000024
RGD
HGNC
PMID:15265030 GO_REF:0000024, MGI:MGI:3052428 NCBI chr 1:89,383,515...89,399,041
Ensembl chr 1:89,383,519...89,399,041
JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 ISO MGI:MGI:2150656 (MGI:MGI:3652665|PMID:16754854) RGD PMID:16754854 MGI:MGI:3652665 NCBI chr 9:112,293,388...112,451,677
Ensembl chr 9:112,293,388...112,451,677
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:MGI:2684189 (MGI:MGI:2682174|PMID:14500757) RGD PMID:14500757 MGI:MGI:2682174 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IEP
IBA
ISO
PMID:21873635
MGI:MGI:1857655 (MGI:MGI:76093|PMID:7651534)
RGD PMID:7651534, PMID:8506951, PMID:21873635 MGI:MGI:76093, RGD:2317549, RGD:13792537 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Mpst mercaptopyruvate sulfurtransferase IDA RGD PMID:6573924 RGD:9685558 NCBI chr 7:119,626,636...119,631,317
Ensembl chr 7:119,626,637...119,631,425
JBrowse link
G Mrtfb myocardin related transcription factor B ISO MGI:MGI:3587937 (MGI:MGI:3695837|PMID:17183527) RGD PMID:17183527 MGI:MGI:3695837 NCBI chr10:1,151,163...1,273,269 JBrowse link
G Nat1 N-acetyltransferase 1 IEP RGD PMID:18799802 RGD:2303764 NCBI chr16:23,970,742...23,991,573
Ensembl chr16:23,970,743...23,991,573
JBrowse link
G Nf1 neurofibromin 1 ISO
ISS
IEA
MGI:MGI:1857444 (MGI:MGI:66069|PMID:7926784)
GO_REF:0000024
GO_REF:0000107
RGD
HGNC
Ensembl
PMID:7926784 GO_REF:0000024, GO_REF:0000107, MGI:MGI:66069 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Nodal nodal growth differentiation factor ISO MGI:MGI:2158732 (MGI:MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:MGI:2155575 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:3045664|PMID:15226394) RGD PMID:15226394 MGI:MGI:3045664 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Notch2 notch receptor 2 ISO MGI:MGI:3617328 (MGI:MGI:5616947|PMID:25446530) RGD PMID:25446530 MGI:MGI:5616947 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Nts neurotensin IEP RGD PMID:8342998 RGD:9743870 NCBI chr 7:44,111,594...44,120,998
Ensembl chr 7:44,111,151...44,121,130
JBrowse link
G Onecut1 one cut homeobox 1 ISO
IEA
MGI:MGI:1891408 (MGI:MGI:3763866|PMID:17936262)
GO_REF:0000107
RGD
Ensembl
PMID:17936262 GO_REF:0000107, MGI:MGI:3763866 NCBI chr 8:81,765,779...81,799,894
Ensembl chr 8:81,766,041...81,793,577
JBrowse link
G Onecut2 one cut homeobox 2 ISO
IEA
MGI:MGI:1196423 (MGI:MGI:3763866|PMID:17936262)
GO_REF:0000107
RGD
Ensembl
PMID:17936262 GO_REF:0000107, MGI:MGI:3763866 NCBI chr18:59,830,375...59,882,490
Ensembl chr18:59,830,363...59,875,127
JBrowse link
G Otc ornithine carbamoyltransferase IEP RGD PMID:8690412 RGD:4144072 NCBI chr  X:13,524,804...13,601,074
Ensembl chr  X:13,524,607...13,601,069
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 IEP
ISO
PMID:12552133
(PMID:12552133)
RGD PMID:12552133, PMID:12552133 RGD:629554 NCBI chr 5:126,031,368...126,053,726
Ensembl chr 5:126,031,368...126,053,726
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 ISO MGI:MGI:2388676 (MGI:MGI:4355651|PMID:19619492) RGD PMID:19619492 MGI:MGI:4355651 NCBI chr12:9,496,044...9,501,211
Ensembl chr12:9,496,044...9,501,213
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha ISO MGI:MGI:4845856 (MGI:MGI:5582991|PMID:24691033) RGD PMID:24691033 MGI:MGI:5582991 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO UniProtKB:O35245 (MGI:MGI:5441703|PMID:21685914) RGD PMID:21685914 MGI:MGI:5441703 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO UniProtKB:O08852 (MGI:MGI:5441703|PMID:21685914)
(PMID:11891195)
RGD PMID:11891195, PMID:21685914 MGI:MGI:5441703 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link
G Pkm pyruvate kinase M1/2 IDA RGD PMID:7327170 RGD:2303137 NCBI chr 8:64,480,963...64,502,957
Ensembl chr 8:64,481,172...64,502,722
JBrowse link
G Prkcsh protein kinase C substrate 80K-H ISO
IBA
UniProtKB:Q8VHE0 (MGI:MGI:5441703|PMID:21685914)
PMID:21873635
RGD PMID:21685914, PMID:21873635 MGI:MGI:5441703, RGD:13792537 NCBI chr 8:23,014,802...23,026,507
Ensembl chr 8:23,014,956...23,026,503
JBrowse link
G Proc protein C, inactivator of coagulation factors Va and VIIIa IEP
ISO
MGI:MGI:2183063 (MGI:MGI:1306904|PMID:9788960) RGD PMID:9788960, PMID:7660357 MGI:MGI:1306904, RGD:1299299 NCBI chr18:24,918,402...24,928,822
Ensembl chr18:24,918,398...24,929,091
JBrowse link
G Pros1 protein S IEP RGD PMID:7660357 RGD:1299299 NCBI chr 7:1,206,648...1,288,140
Ensembl chr 7:1,206,648...1,288,134
JBrowse link
G Prox1 prospero homeobox 1 IEP
ISO
(PMID:11789987) RGD PMID:11789987, PMID:16770575 RGD:5133274 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Psmb9 proteasome 20S subunit beta 9 IEP RGD PMID:24707720 RGD:9854625 NCBI chr20:3,973,424...3,978,845
Ensembl chr20:3,973,420...3,978,845
JBrowse link
G Ptcd2 pentatricopeptide repeat domain 2 ISO MGI:MGI:3830811 (MGI:MGI:3829520|PMID:18729827) RGD PMID:18729827 MGI:MGI:3829520 NCBI chr 2:29,570,581...29,598,328
Ensembl chr 2:29,570,538...29,598,277
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:12057922 RGD:727382 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Qdpr quinoid dihydropteridine reductase IEP RGD PMID:710385 RGD:5128606 NCBI chr14:70,164,682...70,178,284
Ensembl chr14:70,164,650...70,178,284
JBrowse link
G Rara retinoic acid receptor, alpha IEP RGD PMID:15388488 RGD:2314298 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 ISO MGI:MGI:3690329 (MGI:MGI:3689241|PMID:17015619) RGD PMID:17015619 MGI:MGI:3689241 NCBI chr 5:13,033,918...13,097,369
Ensembl chr 5:13,033,918...13,097,341
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (MGI:MGI:76008|PMID:7603567) RGD PMID:7603567 MGI:MGI:76008 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Rgn regucalcin IEP RGD PMID:9546611, PMID:8794449 RGD:9590173, RGD:9590212 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904
JBrowse link
G Rhbdd3 rhomboid domain containing 3 ISO MGI:MGI:5516031 (MGI:MGI:5492204|PMID:23610400) RGD PMID:23610400 MGI:MGI:5492204 NCBI chr14:85,350,852...85,357,029
Ensembl chr14:85,351,358...85,357,023
JBrowse link
G Rpgrip1l Rpgrip1-like ISO MGI:MGI:3716208 (MGI:MGI:3716248|PMID:17558409) RGD PMID:17558409 MGI:MGI:3716248 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055
JBrowse link
G Runx1 RUNX family transcription factor 1 ISO MGI:MGI:3043614 (MGI:MGI:3759935|PMID:16174759) RGD PMID:16174759 MGI:MGI:3759935 NCBI chr11:32,765,147...33,003,061
Ensembl chr11:32,769,165...33,003,021
JBrowse link
G Rxra retinoid X receptor alpha IEP RGD PMID:14729401 RGD:1643117 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908
JBrowse link
G Sec63 SEC63 homolog, protein translocation regulator ISO MGI:MGI:5442171|UniProtKB:O08795 (MGI:MGI:5441703|PMID:21685914) RGD PMID:21685914 MGI:MGI:5441703 NCBI chr20:47,494,270...47,563,222
Ensembl chr20:47,494,270...47,563,222
JBrowse link
G Slc25a4 solute carrier family 25 member 4 IEP RGD PMID:9468308 RGD:9681468 NCBI chr16:49,266,903...49,270,698
Ensembl chr16:49,266,903...49,270,698
JBrowse link
G Slco1b2 solute carrier organic anion transporter family member 1B2 IEP RGD PMID:15288467 RGD:2303131 NCBI chr 4:175,814,118...175,881,775
Ensembl chr 4:175,814,118...175,881,768
JBrowse link
G Slco2b1 solute carrier organic anion transporter family, member 2b1 IEP RGD PMID:15345472 RGD:2316987 NCBI chr 1:164,623,313...164,671,612
Ensembl chr 1:164,623,599...164,671,577
JBrowse link
G Smad3 SMAD family member 3 ISO MGI:MGI:108051 (MGI:MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:MGI:3618021 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO MGI:MGI:2386105|MGI:MGI:3611933 (MGI:MGI:3610843|PMID:16287714) RGD PMID:16287714 MGI:MGI:3610843 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
G Sod2 superoxide dismutase 2 ISO MGI:MGI:2177602|MGI:MGI:2447406 (MGI:MGI:3718142|PMID:17367743) RGD PMID:17367743 MGI:MGI:3718142 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587
JBrowse link
G Sp1 Sp1 transcription factor ISO MGI:MGI:1277166 (MGI:MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:MGI:3717030 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629
JBrowse link
G Sp3 Sp3 transcription factor ISO MGI:MGI:98372 (MGI:MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:MGI:3717030 NCBI chr 3:59,644,579...59,689,011
Ensembl chr 3:59,646,015...59,688,692
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:36,320,504...36,354,694
Ensembl chr 1:36,320,461...36,354,756
JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IEP RGD PMID:9199345 RGD:11039429 NCBI chr 6:104,611,026...104,640,033
Ensembl chr 6:104,611,026...104,615,302
JBrowse link
G Stat5b signal transducer and activator of transcription 5B IDA RGD PMID:17565389 RGD:2291935 NCBI chr10:88,686,207...88,712,313
Ensembl chr10:88,686,207...88,754,829
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 ISO MGI:MGI:2176946|MGI:MGI:3606185 (MGI:MGI:3806427|PMID:18722179) RGD PMID:18722179 MGI:MGI:3806427 NCBI chr 1:170,585,160...170,586,428
Ensembl chr 1:170,585,167...170,586,603
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 ISO (MGI:MGI:2663364|PMID:12773577) RGD PMID:12773577 MGI:MGI:2663364 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
G Thra thyroid hormone receptor alpha IEP RGD PMID:17496154 RGD:2314319 NCBI chr10:86,657,285...86,684,935
Ensembl chr10:86,657,285...86,684,933
JBrowse link
G Thra_v1 thyroid hormone receptor alpha, variant 1 IEP RGD PMID:17496154 RGD:2314319
G Thra_v2 thyroid hormone receptor alpha, variant 2 IEP RGD PMID:17496154 RGD:2314319
G Tk1 thymidine kinase 1 IEP RGD PMID:995499 RGD:2317236 NCBI chr10:106,817,556...106,828,888
Ensembl chr10:106,817,601...106,828,884
JBrowse link
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 IEP RGD PMID:16310220, PMID:18938141 RGD:2315453, RGD:2317023 NCBI chr 9:95,295,701...95,302,822
Ensembl chr 9:95,161,157...95,302,822
JBrowse link
G Ugt1a2 UDP glucuronosyltransferase 1 family, polypeptide A2 IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:95,285,592...95,302,822
Ensembl chr 9:95,161,157...95,302,822
JBrowse link
G Ugt1a5 UDP glucuronosyltransferase family 1 member A5 IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:95,256,628...95,302,822
Ensembl chr 9:95,161,157...95,302,822
JBrowse link
G Ugt1a6 UDP glucuronosyltransferase family 1 member A6 IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:95,241,609...95,302,822
Ensembl chr 9:95,161,157...95,302,822
JBrowse link
G Ugt1a7c UDP glucuronosyltransferase 1 family, polypeptide A7C IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:95,233,957...95,302,822
Ensembl chr 9:95,161,157...95,302,822
JBrowse link
G Upb1 beta-ureidopropionase 1 IDA RGD PMID:6870258 RGD:2317093 NCBI chr20:14,167,383...14,193,724
Ensembl chr20:14,167,586...14,193,690
JBrowse link
G Upf2 UPF2, regulator of nonsense mediated mRNA decay ISO MGI:MGI:3790198 (MGI:MGI:4821037|PMID:20657840) RGD PMID:20657840 MGI:MGI:4821037 NCBI chr17:76,176,379...76,287,246
Ensembl chr17:76,175,643...76,287,186
JBrowse link
G Urod uroporphyrinogen decarboxylase IEP RGD PMID:6219675 RGD:4145103 NCBI chr 5:135,855,429...135,859,515
Ensembl chr 5:135,855,433...135,859,643
JBrowse link
G Vwf von Willebrand factor ISO MGI:MGI:1857656 (MGI:MGI:70957|PMID:7854452) RGD PMID:7854452 MGI:MGI:70957 NCBI chr 4:158,085,059...158,219,525
Ensembl chr 4:158,088,505...158,219,523
JBrowse link
G Wnt4 Wnt family member 4 IEA
ISO
GO_REF:0000107
(PMID:15312687)
Ensembl
RGD
PMID:15312687 GO_REF:0000107 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
G Xbp1 X-box binding protein 1 ISO
ISS
(MGI:MGI:1352298|PMID:10652269)
GO_REF:0000024
RGD
UniProt
PMID:10652269 GO_REF:0000024, MGI:MGI:1352298 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:MGI:2180033 (MGI:MGI:5609934|PMID:23117660) RGD PMID:23117660 MGI:MGI:5609934 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
liver morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 ISO
IEA
MGI:MGI:3714267 (MGI:MGI:3713609|PMID:17339333)
GO_REF:0000107
RGD
Ensembl
PMID:17339333 GO_REF:0000107, MGI:MGI:3713609 NCBI chr 9:86,044,485...86,129,066
Ensembl chr 9:86,044,485...86,129,329
JBrowse link
G Notch2 notch receptor 2 ISO MGI:MGI:3617328 (MGI:MGI:5616947|PMID:25446530) RGD PMID:25446530 MGI:MGI:5616947 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 ISO MGI:MGI:5301343 (MGI:MGI:5298314|PMID:21803851) RGD PMID:21803851 MGI:MGI:5298314 NCBI chr 2:238,719,389...238,802,975
Ensembl chr 2:238,720,835...238,803,024
JBrowse link
liver regeneration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 IEP RGD PMID:8855951 RGD:8548508 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
JBrowse link
G Alas2 5'-aminolevulinate synthase 2 IEP RGD PMID:6895999 RGD:11035238 NCBI chr  X:23,167,576...23,187,356
Ensembl chr  X:23,167,696...23,187,341
JBrowse link
G Angpt1 angiopoietin 1 IEP RGD PMID:11549276 RGD:704403 NCBI chr 7:81,338,327...81,592,459
Ensembl chr 7:81,342,280...81,592,206
JBrowse link
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 IEP RGD PMID:11032760 RGD:13782137 NCBI chr10:59,528,849...59,560,440
Ensembl chr10:59,529,785...59,560,433
JBrowse link
G Aurka aurora kinase A IEA
ISO
GO_REF:0000107
(PMID:19435814)
Ensembl
RGD
PMID:19435814 GO_REF:0000107 NCBI chr 3:170,364,177...170,380,278
Ensembl chr 3:170,364,181...170,378,210
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEP RGD PMID:21503946 RGD:11531107 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Ccnd1 cyclin D1 ISO (MGI:MGI:5515698|PMID:23740243) RGD PMID:23740243 MGI:MGI:5515698 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta ISO
ISS
(MGI:MGI:1277818|PMID:9727068)
GO_REF:0000024
RGD
UniProt
PMID:9727068 GO_REF:0000024, MGI:MGI:1277818 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Cftr CF transmembrane conductance regulator IEP RGD PMID:1378998 RGD:11567227 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676
JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:15826721 RGD:11344894 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G Cpb2 carboxypeptidase B2 IEP RGD PMID:19386599 RGD:7243112 NCBI chr15:57,290,849...57,339,762
Ensembl chr15:57,290,849...57,339,760
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IEP RGD PMID:31953200 RGD:25823179 NCBI chr 1:218,568,157...218,629,679
Ensembl chr 1:218,569,510...218,629,678
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 IEP RGD PMID:8573159 RGD:11565141 NCBI chr 3:147,713,808...147,760,375
Ensembl chr 3:147,713,821...147,757,862
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 IEP RGD PMID:8573159 RGD:11565141 NCBI chr19:9,972,537...10,012,043
Ensembl chr19:9,972,537...10,012,043
JBrowse link
G Csnk2b casein kinase 2 beta IEP RGD PMID:8573159 RGD:11565141 NCBI chr20:5,108,692...5,113,675
Ensembl chr20:5,106,890...5,113,112
JBrowse link
G Egfr epidermal growth factor receptor IEP RGD PMID:2401457 RGD:10395295 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO MGI:MGI:107940 (MGI:MGI:5637451|PMID:25477280) RGD PMID:25477280 MGI:MGI:5637451 NCBI chr10:89,104,026...89,139,978
Ensembl chr10:89,104,027...89,130,339
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO MGI:MGI:1097695 (MGI:MGI:5637451|PMID:25477280) RGD PMID:25477280 MGI:MGI:5637451 NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:10632538 RGD:8662889 NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790
JBrowse link
G Fga fibrinogen alpha chain IEP RGD PMID:3817019 RGD:728788 NCBI chr 2:181,997,562...182,013,726
Ensembl chr 2:182,006,242...182,013,763
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 IEP RGD PMID:16162160 RGD:10402121 NCBI chr12:9,033,993...9,205,886
Ensembl chr12:9,034,308...9,205,905
JBrowse link
G Gfer growth factor, augmenter of liver regeneration IMP RGD PMID:24880092 RGD:9685725 NCBI chr10:14,059,347...14,061,703
Ensembl chr10:14,059,347...14,061,703
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:14,019,723...14,045,781
Ensembl chr20:14,019,723...14,025,068
JBrowse link
G Gli1 GLI family zinc finger 1 ISO
IEP
MGI:MGI:1857797 (MGI:MGI:5515698|PMID:23740243) RGD PMID:23740243, PMID:22024090, PMID:22790641 MGI:MGI:5515698, RGD:12911223, RGD:12832760 NCBI chr 7:70,620,794...70,633,171
Ensembl chr 7:70,620,766...70,630,338
JBrowse link
G Gli3 GLI family zinc finger 3 IEP RGD PMID:22024090 RGD:12911223 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:22364558 RGD:8694419 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Hfe homeostatic iron regulator IEP RGD PMID:22364558 RGD:8694419 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985
JBrowse link
G Hmox1 heme oxygenase 1 IMP RGD PMID:24815159 RGD:10755743 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456
JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 IEP RGD PMID:16081591 RGD:1599972 NCBI chr 1:199,248,084...199,251,745
Ensembl chr 1:199,248,470...199,251,740
JBrowse link
G Ihh Indian hedgehog signaling molecule IEP RGD PMID:22024090 RGD:12911223 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Il10 interleukin 10 IEP RGD PMID:11813605 RGD:11049526 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:24412291 RGD:14696652 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G Il6 interleukin 6 ISS
ISO
GO_REF:0000024
(MGI:MGI:84432|PMID:8910279)
UniProt
RGD
PMID:8910279 GO_REF:0000024, MGI:MGI:84432 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Insr insulin receptor IEP RGD PMID:23633480 RGD:9685423 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 IMP RGD PMID:24814243 RGD:13793384 NCBI chr 4:140,247,297...140,580,749
Ensembl chr 4:140,247,313...140,580,748
JBrowse link
G Klkb1 kallikrein B1 IEP RGD PMID:9869390 RGD:7297052 NCBI chr16:50,151,127...50,175,407
Ensembl chr16:50,152,008...50,175,458
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:3335218 RGD:10059623 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Ncl nucleolin IEP RGD PMID:7490256 RGD:9686389 NCBI chr 9:93,369,119...93,377,643
Ensembl chr 9:93,368,932...93,377,643
JBrowse link
G Nfkbia NFKB inhibitor alpha IEP RGD PMID:24512945 RGD:10413865 NCBI chr 6:76,267,227...76,270,457
Ensembl chr 6:76,267,228...76,270,457
JBrowse link
G Npm1 nucleophosmin 1 IEP RGD PMID:14635188 RGD:11534994 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IEP RGD PMID:29138817 RGD:15042871 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
G Pcna proliferating cell nuclear antigen IEP RGD PMID:7906221 RGD:10448980 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 IEP RGD PMID:191106 RGD:11554175 NCBI chr14:113,530,470...113,561,645
Ensembl chr14:113,530,470...113,561,645
JBrowse link
G Pou2f1 POU class 2 homeobox 1 IEP RGD PMID:1841628 RGD:9743904 NCBI chr13:84,075,316...84,217,368
Ensembl chr13:84,083,632...84,217,366
JBrowse link
G Prmt1 protein arginine methyltransferase 1 IEP RGD PMID:15837430 RGD:2299961 NCBI chr 1:100,971,132...100,980,411
Ensembl chr 1:100,971,273...100,980,340
JBrowse link
G Prmt5 protein arginine methyltransferase 5 IEP RGD PMID:15837430 RGD:2299961 NCBI chr15:33,156,508...33,165,893
Ensembl chr15:33,156,492...33,165,895
JBrowse link
G Ptch1 patched 1 IEP RGD PMID:22024090 RGD:12911223 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Ptpn3 protein tyrosine phosphatase, non-receptor type 3 IEP RGD PMID:7591957 RGD:1599982 NCBI chr 5:74,248,996...74,368,167
Ensembl chr 5:74,248,996...74,368,186
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family IEP RGD PMID:9015365 RGD:10003155 NCBI chr 2:208,193,950...208,215,186
Ensembl chr 2:208,193,954...208,215,187
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IEP RGD PMID:22227930 RGD:9850085 NCBI chr 7:139,232,263...139,254,668
Ensembl chr 7:139,232,251...139,254,551
JBrowse link
G Reg1a regenerating family member 1 alpha IEP RGD PMID:19284990 RGD:10044030 NCBI chr 4:109,497,962...109,500,626
Ensembl chr 4:109,497,962...109,501,082
JBrowse link
G Rgn regucalcin IEP RGD PMID:7759556 RGD:9590197 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904
JBrowse link
G Rpl10 ribosomal protein L10 IEP RGD PMID:6121318 RGD:11038709 NCBI chr  X:156,438,251...156,440,461
Ensembl chr  X:156,438,251...156,440,461
JBrowse link
G Rpl13 ribosomal protein L13 IEP RGD PMID:6121318 RGD:11038709 NCBI chr19:55,917,489...55,920,040
Ensembl chr19:55,917,736...55,919,996
JBrowse link
G Rpl18 ribosomal protein L18 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 1:101,700,910...101,703,551
Ensembl chr 1:101,701,975...101,703,550
JBrowse link
G Rpl19 ribosomal protein L19 IEP RGD PMID:6121318 RGD:11038709 NCBI chr10:85,978,691...85,981,979
Ensembl chr10:85,978,691...85,981,979
JBrowse link
G Rpl30 ribosomal protein L30 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 7:73,213,538...73,216,431
Ensembl chr 7:73,213,581...73,216,251
JBrowse link
G Rpl32 ribosomal protein L32 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 4:147,715,480...147,719,044
Ensembl chr 6:145,777,318...145,777,767
Ensembl chr 4:145,777,318...145,777,767
JBrowse link
G Rpl7 ribosomal protein L7 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 5:2,633,517...2,636,525
Ensembl chr 5:2,632,712...2,640,021
JBrowse link
G Rps15 ribosomal protein S15 IEP RGD PMID:2829897 RGD:11040696 NCBI chr 7:12,282,134...12,283,573
Ensembl chr 7:12,282,109...12,283,608
JBrowse link
G Rps16 ribosomal protein S16 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 1:85,405,499...85,408,444
Ensembl chr 1:85,405,512...85,408,444
JBrowse link
G Rps24 ribosomal protein S24 IEP RGD PMID:7612009 RGD:11041663 NCBI chr16:757,390...762,091
Ensembl chr16:757,403...762,075
JBrowse link
G Serpina10 serpin family A member 10 IEP RGD PMID:8670294 RGD:729731 NCBI chr 6:127,500,014...127,508,470
Ensembl chr 6:127,500,016...127,508,452
JBrowse link
G Shh sonic hedgehog signaling molecule IEP RGD PMID:22790641 RGD:12832760 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 IEP RGD PMID:23633480 RGD:9685423 NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197
JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IEP RGD PMID:7686911 RGD:729792 NCBI chr 6:104,611,026...104,640,033
Ensembl chr 6:104,611,026...104,615,302
JBrowse link
G Sulf2 sulfatase 2 ISO MGI:MGI:3587954 (MGI:MGI:5515698|PMID:23740243) RGD PMID:23740243 MGI:MGI:5515698 NCBI chr 3:162,791,349...162,872,984
Ensembl chr 3:162,791,355...162,872,831
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:25862490 RGD:11073669 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:9178702 RGD:14995465 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tyms thymidylate synthetase IEP RGD PMID:2707640 RGD:2317422 NCBI chr 9:121,918,875...121,931,564
Ensembl chr 9:121,918,947...121,931,564
JBrowse link
G Ucp2 uncoupling protein 2 IEP RGD PMID:19104935 RGD:7204431 NCBI chr 1:165,506,375...165,512,744
Ensembl chr 1:165,506,361...165,512,744
JBrowse link
G Vtn vitronectin IDA RGD PMID:10988248 RGD:10003090 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038
JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:12217600 RGD:727737 NCBI chr 4:158,085,059...158,219,525
Ensembl chr 4:158,088,505...158,219,523
JBrowse link
G Wdr35 WD repeat domain 35 IEP RGD PMID:18472094 RGD:11553927 NCBI chr 6:34,094,291...34,152,048
Ensembl chr 6:34,094,306...34,151,622
JBrowse link
negative regulation of hepatocyte differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frzb frizzled-related protein ISO (MGI:MGI:4356222|PMID:19562671) RGD PMID:19562671 MGI:MGI:4356222 NCBI chr 3:67,635,604...67,668,772
Ensembl chr 3:67,635,607...67,668,772
JBrowse link
negative regulation of hepatocyte proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A IMP RGD PMID:24190239 RGD:11252157 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 IMP
ISS
ISO
PMID:15467833
GO_REF:0000024
(MGI:MGI:3057041|PMID:15467833)
UniProt
RGD
PMID:15467833, PMID:15467833 GO_REF:0000024, MGI:MGI:3057041, RGD:11059592 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Cpb2 carboxypeptidase B2 IMP RGD PMID:19386599 RGD:7243112 NCBI chr15:57,290,849...57,339,762
Ensembl chr15:57,290,849...57,339,760
JBrowse link
G Lims1 LIM zinc finger domain containing 1 ISO MGI:MGI:2385067 (MGI:MGI:5559100|PMID:24058607) RGD PMID:24058607 MGI:MGI:5559100 NCBI chr20:27,895,981...28,004,767
Ensembl chr20:27,954,433...28,002,082
JBrowse link
G Lims2 LIM zinc finger domain containing 2 ISO MGI:MGI:1195263 (MGI:MGI:5559100|PMID:24058607) RGD PMID:24058607 MGI:MGI:5559100 NCBI chr18:24,707,951...24,746,159
Ensembl chr18:24,708,115...24,746,159
JBrowse link
positive regulation of hepatocyte differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IMP RGD PMID:19229878 RGD:8885195 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Foxa3 forkhead box A3 IMP RGD PMID:9878541 RGD:2315086 NCBI chr 1:79,921,292...79,930,219
Ensembl chr 1:79,920,752...79,930,263
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 ISO (MGI:MGI:4441249|PMID:18593560) RGD PMID:18593560 MGI:MGI:4441249 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
JBrowse link
positive regulation of hepatocyte proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD-like apoptosis regulator IMP RGD PMID:16033771 RGD:11341689 NCBI chr 9:65,534,608...65,586,395
Ensembl chr 9:65,534,704...65,587,251
JBrowse link
G Fgf1 fibroblast growth factor 1 IDA PMID:16756958 UniProt PMID:16756958 RGD:10047366 NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824
JBrowse link
G Fgf18 fibroblast growth factor 18 IDA PMID:16756958 UniProt PMID:16756958 RGD:10047366 NCBI chr10:18,047,109...18,082,290
Ensembl chr10:18,047,109...18,063,391
JBrowse link
G Hpn hepsin IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15614436)
Ensembl
UniProt
RGD
PMID:15614436 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:89,534,112...89,549,575
Ensembl chr 1:89,534,106...89,543,967
JBrowse link
G Il18 interleukin 18 IDA RGD PMID:24412291 RGD:14696652 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 IMP RGD PMID:24814243 RGD:13793384 NCBI chr 4:140,247,297...140,580,749
Ensembl chr 4:140,247,313...140,580,748
JBrowse link
G Mdk midkine ISS
ISO
GO_REF:0000024
(MGI:MGI:3606557|PMID:15482347)
UniProt
RGD
PMID:15482347 GO_REF:0000024, MGI:MGI:3606557 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:MGI:2176946|MGI:MGI:3511276 (MGI:MGI:3719773|PMID:17438330) RGD PMID:17438330 MGI:MGI:3719773 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Ptn pleiotrophin IDA
ISO
(MGI:MGI:3606557|PMID:15482347) RGD PMID:15482347, PMID:16226713 MGI:MGI:3606557, RGD:9834996 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Rtn4 reticulon 4 ISS
ISO
GO_REF:0000024
(MGI:MGI:6282933|PMID:23299899)
UniProt
RGD
PMID:23299899 GO_REF:0000024, MGI:MGI:6282933 NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458
JBrowse link
G Tnf tumor necrosis factor IMP
IDA
with PCB 126 or TCDD RGD PMID:9111198, PMID:17557910 RGD:14995469, RGD:14995481 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 ISO (MGI:MGI:4943408|PMID:15962316) RGD PMID:15962316 MGI:MGI:4943408 NCBI chr 1:14,401,103...14,416,369
Ensembl chr 1:14,402,913...14,412,807
JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:MGI:5515698|PMID:23740243) RGD PMID:23740243 MGI:MGI:5515698 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Xbp1 X-box binding protein 1 ISO
ISS
(MGI:MGI:1352298|PMID:10652269)
GO_REF:0000024
RGD
UniProt
PMID:10652269 GO_REF:0000024, MGI:MGI:1352298 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
regulation of hepatocyte proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI family zinc finger 1 ISO (MGI:MGI:5515698|PMID:23740243) RGD PMID:23740243 MGI:MGI:5515698 NCBI chr 7:70,620,794...70,633,171
Ensembl chr 7:70,620,766...70,630,338
JBrowse link
G Ifng interferon gamma IDA RGD PMID:15799032 RGD:8142374 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Plau plasminogen activator, urokinase IMP RGD PMID:17587687 RGD:6484147 NCBI chr15:3,644,296...3,650,765
Ensembl chr15:3,644,769...3,650,819
JBrowse link
G Sulf2 sulfatase 2 ISO MGI:MGI:3587954 (MGI:MGI:5515698|PMID:23740243) RGD PMID:23740243 MGI:MGI:5515698 NCBI chr 3:162,791,349...162,872,984
Ensembl chr 3:162,791,355...162,872,831
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    multicellular organismal process 9055
      multicellular organism development 5735
        system development 5272
          hepaticobiliary system development 265
            common bile duct development + 8
            gall bladder development 3
            liver development + 262
Path 2
Term Annotations click to browse term
  biological_process 20017
    developmental process 6813
      anatomical structure development 6256
        multicellular organism development 5735
          system development 5272
            hepaticobiliary system development 265
              common bile duct development + 8
              gall bladder development 3
              liver development + 262
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.