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ONTOLOGY REPORT - ANNOTATIONS


Term:common bile duct development
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Accession:GO:0061009 term browser browse the term
Definition:The progression of the common bile duct over time, from its formation to the mature structure. The common bile duct is formed from the joining of the common hepatic duct running from the liver, and the cystic duct running from the gall bladder. The common bile duct transports bile from the liver and gall bladder to the intestine.
Synonyms:exact_synonym: CBD development;   bile duct development
 broad_synonym: EHBD development;   extrahepatic bile duct development


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common bile duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor ISO (MGI:3794480|PMID:16443691) RGD PMID:16443691 MGI:3794480 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEA
ISO
GO_REF:0000107
MGI:2149672 (MGI:4355651|PMID:19619492)
Ensembl
RGD
PMID:19619492 GO_REF:0000107, MGI:4355651 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hhex hematopoietically expressed homeobox ISO MGI:3721426 (MGI:3720549|PMID:17580084) RGD PMID:17580084 MGI:3720549 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
G Mks1 MKS transition zone complex subunit 1 IEA
ISO
GO_REF:0000107
MGI:4410614 (MGI:4367169|PMID:19776033)
Ensembl
RGD
PMID:19776033 GO_REF:0000107, MGI:4367169 NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO (MGI:4421275|PMID:19913509) RGD PMID:19913509 MGI:4421275 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
hepatic duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox ISO MGI:3721426 (MGI:3720549|PMID:17580084) RGD PMID:17580084 MGI:3720549 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
intrahepatic bile duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gak cyclin G associated kinase ISO MGI:2176228|MGI:5305733 (MGI:5305417|PMID:18434600) RGD PMID:18434600 MGI:5305417 NCBI chr14:2,100,104...2,174,332
Ensembl chr14:2,100,106...2,174,318
JBrowse link
G Notch2 notch receptor 2 IEA
ISO
GO_REF:0000107
MGI:3617328 (MGI:5616947|PMID:25446530)
Ensembl
RGD
PMID:25446530 GO_REF:0000107, MGI:5616947 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:2177602|MGI:2385468 (MGI:3852603|PMID:19403103) RGD PMID:19403103 MGI:3852603 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    multicellular organismal process 9047
      multicellular organism development 5743
        tube development 1210
          common bile duct development 8
            cystic duct development 0
            hepatic duct development 1
            intrahepatic bile duct development 3
Path 2
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure development 6268
        multicellular organism development 5743
          system development 5279
            hepaticobiliary system development 265
              common bile duct development 8
                cystic duct development 0
                hepatic duct development 1
                intrahepatic bile duct development 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.