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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of ribosomal DNA heterochromatin assembly
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Accession:GO:0061187 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of the repression of assembly of rDNA heterochromatin.
Synonyms:broad_synonym: regulation of chromatin silencing at rDNA


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regulation of ribosomal DNA heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Macroh2a1 macroH2A.1 histone NOT ISO (PMID:24071584) RGD PMID:24071584 NCBI chr17:9,282,109...9,344,698
Ensembl chr17:9,282,675...9,344,678
JBrowse link
G Naa40 N(alpha)-acetyltransferase 40, NatD catalytic subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:222,478,021...222,495,382
Ensembl chr 1:222,478,021...222,495,382
JBrowse link
negative regulation of ribosomal DNA heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phf2 PHD finger protein 2 ISO (PMID:20129925) RGD PMID:20129925 NCBI chr17:16,240,458...16,274,626
Ensembl chr17:16,204,427...16,274,624
JBrowse link
G Phf8 PHD finger protein 8 ISO (PMID:20208542) RGD PMID:20208542 NCBI chr  X:21,063,487...21,168,750
Ensembl chr  X:21,063,562...21,168,750
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    cellular process 18791
      regulation of cellular process 12570
        regulation of cellular component biogenesis 1048
          regulation of chromatin assembly 22
            regulation of heterochromatin assembly 20
              regulation of ribosomal DNA heterochromatin assembly 4
                negative regulation of ribosomal DNA heterochromatin assembly 2
                positive regulation of rDNA heterochromatin assembly 0
Path 2
Term Annotations click to browse term
  biological_process 20017
    metabolic process 12256
      cellular metabolic process 11064
        cellular aromatic compound metabolic process 5708
          nucleobase-containing compound metabolic process 5483
            nucleic acid metabolic process 4980
              RNA metabolic process 4470
                regulation of RNA metabolic process 3616
                  regulation of RNA biosynthetic process 3343
                    negative regulation of RNA biosynthetic process 1376
                      negative regulation of nucleic acid-templated transcription 1374
                        negative regulation of transcription, DNA-templated 1341
                          chromatin organization involved in negative regulation of transcription 130
                            heterochromatin assembly 52
                              regulation of heterochromatin assembly 20
                                regulation of ribosomal DNA heterochromatin assembly 4
                                  negative regulation of ribosomal DNA heterochromatin assembly 2
                                  positive regulation of rDNA heterochromatin assembly 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.