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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of ribosomal DNA heterochromatin assembly
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Accession:GO:0061187 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of the repression of assembly of rDNA heterochromatin.
Synonyms:broad_synonym: regulation of chromatin silencing at rDNA


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regulation of ribosomal DNA heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101971629 core histone macro-H2A.1 NOT ISO (PMID:24071584) UniProtKB PMID:24071584 NCBI chrNW_004936597:2,496,489...2,556,352 JBrowse link
negative regulation of ribosomal DNA heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phf2 PHD finger protein 2 ISO (PMID:20129925) UniProtKB PMID:20129925 NCBI chrNW_004936487:2,912,114...2,956,429 JBrowse link
G Phf8 PHD finger protein 8 ISO (PMID:20208542) UniProtKB PMID:20208542 NCBI chrNW_004936751:850,630...935,382 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11962
    cellular process 11135
      regulation of cellular process 7896
        regulation of cellular component biogenesis 931
          regulation of chromatin assembly 20
            regulation of heterochromatin assembly 18
              regulation of ribosomal DNA heterochromatin assembly 3
                negative regulation of ribosomal DNA heterochromatin assembly 2
                positive regulation of rDNA heterochromatin assembly 0
Path 2
Term Annotations click to browse term
  biological_process 11962
    metabolic process 7653
      cellular metabolic process 7051
        cellular aromatic compound metabolic process 3743
          nucleobase-containing compound metabolic process 3574
            nucleic acid metabolic process 3288
              RNA metabolic process 2915
                regulation of RNA metabolic process 2500
                  regulation of RNA biosynthetic process 2291
                    negative regulation of RNA biosynthetic process 1068
                      negative regulation of nucleic acid-templated transcription 1066
                        negative regulation of transcription, DNA-templated 1062
                          chromatin organization involved in negative regulation of transcription 59
                            heterochromatin assembly 41
                              regulation of heterochromatin assembly 18
                                regulation of ribosomal DNA heterochromatin assembly 3
                                  negative regulation of ribosomal DNA heterochromatin assembly 2
                                  positive regulation of rDNA heterochromatin assembly 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.