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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of transcription from RNA polymerase II promoter in response to hypoxia
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Accession:GO:0061418 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus.


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regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bach1 BTB domain and CNC homolog 1 JBrowse link 11 27,364,913 27,398,713 RGD:1624291
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:1624291
RGD:1600115
G Stox1 storkhead box 1 JBrowse link 20 32,276,857 32,353,677 RGD:1624291
negative regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 1 12,823,363 12,825,806 RGD:1624291
G Hif1an hypoxia inducible factor 1 subunit alpha inhibitor JBrowse link 1 264,309,214 264,319,269 RGD:1624291
RGD:13792537
G Sirt2 sirtuin 2 JBrowse link 1 86,948,866 86,971,954 RGD:1600115
RGD:1624291
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 4 145,580,869 145,587,835 RGD:1624291
positive regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:1600115
RGD:1624291
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:1624291
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1624291
RGD:1600115
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link 14 59,657,738 59,865,427 RGD:1624291
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19332
    response to stimulus 10393
      response to stress 3956
        response to hypoxia 431
          cellular response to hypoxia 174
            regulation of transcription from RNA polymerase II promoter in response to hypoxia 13
              negative regulation of transcription from RNA polymerase II promoter in response to hypoxia 4
              positive regulation of transcription from RNA polymerase II promoter in response to hypoxia 6
Path 2
Term Annotations click to browse term
  biological_process 19332
    metabolic process 11554
      cellular metabolic process 10566
        cellular aromatic compound metabolic process 5484
          nucleobase-containing compound metabolic process 5258
            nucleic acid metabolic process 4770
              RNA metabolic process 4282
                regulation of RNA metabolic process 3495
                  regulation of RNA biosynthetic process 3234
                    regulation of nucleic acid-templated transcription 3229
                      regulation of transcription, DNA-templated 3178
                        regulation of DNA-templated transcription in response to stress 60
                          regulation of transcription from RNA polymerase II promoter in response to stress 56
                            regulation of transcription from RNA polymerase II promoter in response to hypoxia 13
                              negative regulation of transcription from RNA polymerase II promoter in response to hypoxia 4
                              positive regulation of transcription from RNA polymerase II promoter in response to hypoxia 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.