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ONTOLOGY REPORT - ANNOTATIONS


Term:inflammasome complex
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Accession:GO:0061702 term browser browse the term
Definition:A cytosolic protein complex that is capable of activating caspase-1.


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inflammasome complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nlrp1a NLR family, pyrin domain containing 1A JBrowse link 10 57,692,474 57,747,608 RGD:13792537
G Nlrp6 NLR family, pyrin domain containing 6 JBrowse link 1 213,676,954 213,683,114 RGD:1600115
G Nlrp9 NLR family, pyrin domain containing 9 JBrowse link 1 71,859,390 71,917,337 RGD:1624291
AIM2 inflammasome complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aim2 absent in melanoma 2 JBrowse link 13 91,919,834 91,963,080 RGD:1624291
RGD:13792537
G Casp1 caspase 1 JBrowse link 8 2,605,743 2,614,637 RGD:1624291
RGD:13792537
RGD:1600115
G Casp12 caspase 12 JBrowse link 8 2,658,892 2,686,160 RGD:13792537
G Casp4 caspase 4 JBrowse link 8 2,616,391 2,651,682 RGD:13792537
G Pycard PYD and CARD domain containing JBrowse link 1 199,438,029 199,439,062 RGD:1624291
IPAF inflammasome complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casp1 caspase 1 JBrowse link 8 2,605,743 2,614,637 RGD:1600115
RGD:13792537
RGD:1624291
G Casp12 caspase 12 JBrowse link 8 2,658,892 2,686,160 RGD:13792537
G Casp4 caspase 4 JBrowse link 8 2,616,391 2,651,682 RGD:13792537
G Naip6 NLR family, apoptosis inhibitory protein 6 JBrowse link 2 30,377,505 30,418,578 RGD:1624291
G Nlrc4 NLR family, CARD domain containing 4 JBrowse link 6 22,167,874 22,194,755 RGD:1600115
RGD:1624291
NLRP1 inflammasome complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casp1 caspase 1 JBrowse link 8 2,605,743 2,614,637 RGD:1624291
RGD:1600115
G Nlrp1a NLR family, pyrin domain containing 1A JBrowse link 10 57,692,474 57,747,608 RGD:1624291
G Pycard PYD and CARD domain containing JBrowse link 1 199,438,029 199,439,062 RGD:1624291
NLRP3 inflammasome complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casp1 caspase 1 JBrowse link 8 2,605,743 2,614,637 RGD:1624291
RGD:13792537
RGD:1600115
G Casp12 caspase 12 JBrowse link 8 2,658,892 2,686,160 RGD:13792537
G Casp4 caspase 4 JBrowse link 8 2,616,391 2,651,682 RGD:13792537
G Ddx3x DEAD-box helicase 3, X-linked JBrowse link X 10,400,363 10,414,010 RGD:1600115
RGD:1624291
G Dhx33 DEAH-box helicase 33 JBrowse link 10 57,622,022 57,638,485 RGD:1624291
G Gsdmd gasdermin D JBrowse link 7 116,889,147 116,894,134 RGD:1624291
RGD:13792537
G Nlrp1b NLR family, pyrin domain containing 1B JBrowse link 10 57,755,957 57,847,867 RGD:1624291
G Nlrp3 NLR family, pyrin domain containing 3 JBrowse link 10 45,884,324 45,918,290 RGD:1624291
G Pycard PYD and CARD domain containing JBrowse link 1 199,438,029 199,439,062 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19843
    protein-containing complex 5779
      inflammasome complex 15
        AIM2 inflammasome complex 5
        IPAF inflammasome complex 5
        NLRP1 inflammasome complex 3
        NLRP3 inflammasome complex 9
Path 2
Term Annotations click to browse term
  cellular_component 19843
    intracellular 13806
      cytoplasm 10553
        cytosol 3815
          inflammasome complex 15
            AIM2 inflammasome complex 5
            IPAF inflammasome complex 5
            NLRP1 inflammasome complex 3
            NLRP3 inflammasome complex 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.