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ONTOLOGY REPORT - ANNOTATIONS


Term:process utilizing autophagic mechanism
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Accession:GO:0061919 term browser browse the term
Definition:A cellular process involving delivery of a portion of the cytoplasm to lysosomes or to the plant or fungal vacuole that does not involve direct transport through the endocytic or vacuolar protein sorting (Vps) pathways. This process typically leads to degradation of the cargo; however, it can also be used to deliver resident proteins, such as in the cytoplasm-to-vacuole targeting (Cvt) pathway.


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aggrephagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acbd5 acyl-CoA binding domain containing 5 JBrowse link NW_004955429 2,623,042 2,661,182 RGD:9068941
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Map1lc3c microtubule associated protein 1 light chain 3 gamma JBrowse link NW_004955406 5,769,894 5,774,806 RGD:9068941
G Sqstm1 sequestosome 1 JBrowse link NW_004955408 757,426 764,989 RGD:9068941
G Ubqln1 ubiquilin 1 JBrowse link NW_004955432 3,575,034 3,617,029 RGD:9068941
G Wdfy3 WD repeat and FYVE domain containing 3 JBrowse link NW_004955474 4,764,902 5,045,421 RGD:9068941
G Wdr81 WD repeat domain 81 JBrowse link NW_004955481 1,450,127 1,462,564 RGD:9068941
autophagosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link NW_004955422 1,455,392 1,644,368 RGD:9068941
G Atg101 autophagy related 101 JBrowse link NW_004955547 2,436,974 2,446,849 RGD:9068941
G Atg12 autophagy related 12 JBrowse link NW_004955408 35,607,541 35,620,878 RGD:9068941
G Atg13 autophagy related 13 JBrowse link NW_004955422 1,398,646 1,432,440 RGD:9068941
G Atg14 autophagy related 14 JBrowse link NW_004955466 13,898,311 13,972,506 RGD:9068941
G Atg16l2 autophagy related 16 like 2 JBrowse link NW_004955414 18,600,904 18,618,048 RGD:9068941
G Atg2a autophagy related 2A JBrowse link NW_004955422 20,261,749 20,290,879 RGD:9068941
G Atg3 autophagy related 3 JBrowse link NW_004955427 12,881,454 12,906,399 RGD:9068941
G Atg4b autophagy related 4B cysteine peptidase JBrowse link NW_004955542 164,969 192,498 RGD:9068941
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Atg9a autophagy related 9A JBrowse link NW_004955453 14,203,798 14,214,760 RGD:9068941
G Atg9b autophagy related 9B JBrowse link NW_004955491 5,458,152 5,467,260 RGD:9068941
G Bag3 BAG cochaperone 3 JBrowse link NW_004955551 446,322 468,329 RGD:9068941
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G Ctsd cathepsin D JBrowse link NW_004955422 13,576,315 13,584,267 RGD:9068941
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 JBrowse link NW_004955435 12,531,651 12,626,969 RGD:9068941
G Emc6 ER membrane protein complex subunit 6 JBrowse link NW_004955467 13,144,659 13,146,434 RGD:9068941
G Epm2a EPM2A glucan phosphatase, laforin JBrowse link NW_004955436 14,925,452 14,982,357 RGD:9068941
G Irgm immunity related GTPase M JBrowse link NW_004955408 2,338,510 2,344,566 RGD:9068941
G Map1lc3a microtubule associated protein 1 light chain 3 alpha JBrowse link NW_004955422 26,774,466 26,776,024 RGD:9068941
G Pacs2 phosphofurin acidic cluster sorting protein 2 JBrowse link NW_004955538 3,559,738 3,616,862 RGD:9068941
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 JBrowse link NW_004955402 28,081,150 28,195,305 RGD:9068941
G Psen1 presenilin 1 JBrowse link NW_004955523 2,128,529 2,210,737 RGD:9068941
G Rab1a RAB1A, member RAS oncogene family JBrowse link NW_004955424 19,393,589 19,421,373 RGD:9068941
G Rab23 RAB23, member RAS oncogene family JBrowse link NW_004955502 2,947,170 2,980,634 RGD:9068941
G Rab33b RAB33B, member RAS oncogene family JBrowse link NW_004955428 4,192,357 4,211,740 RGD:9068941
G Rab7a RAB7A, member RAS oncogene family JBrowse link NW_004955429 15,103,792 15,167,498 RGD:9068941
G Rb1cc1 RB1 inducible coiled-coil 1 JBrowse link NW_004955454 12,201,566 12,257,383 RGD:9068941
G Rufy4 RUN and FYVE domain containing 4 JBrowse link NW_004955453 15,243,125 15,259,086 RGD:9068941
G Sting1 stimulator of interferon response cGAMP interactor 1 JBrowse link NW_004955418 1,091,022 1,097,064 RGD:9068941
G Stx12 syntaxin 12 JBrowse link NW_004955452 6,977,813 7,015,281 RGD:9068941
G Synpo2 synaptopodin 2 JBrowse link NW_004955428 21,152,210 21,323,254 RGD:9068941
G Tmem41b transmembrane protein 41B JBrowse link NW_004955414 25,063,497 25,082,901 RGD:9068941
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 JBrowse link NW_004955422 26,640,239 26,649,291 RGD:9068941
G Ubqln1 ubiquilin 1 JBrowse link NW_004955432 3,575,034 3,617,029 RGD:9068941
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link NW_004955482 760,200 777,133 RGD:9068941
G Vmp1 vacuole membrane protein 1 JBrowse link NW_004955451 3,265,109 3,370,610 RGD:9068941
G Wdr45 WD repeat domain 45 JBrowse link NW_004955543 597,796 604,163 RGD:9068941
G Wdr45b WD repeat domain 45B JBrowse link NW_004955506 515,364 556,507 RGD:9068941
G Wipi1 WD repeat domain, phosphoinositide interacting 1 JBrowse link NW_004955478 4,309,975 4,341,107 RGD:9068941
G Wipi2 WD repeat domain, phosphoinositide interacting 2 JBrowse link NW_004955460 10,090,343 10,132,724 RGD:9068941
autophagosome maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link NW_004955493 6,696,520 6,707,849 RGD:9068941
G Epg5 ectopic P-granules autophagy protein 5 homolog JBrowse link NW_004955402 31,422,848 31,532,189 RGD:9068941
G Lamp2 lysosomal associated membrane protein 2 JBrowse link NW_004955572 1,423,048 1,464,443 RGD:9068941
G Map1lc3a microtubule associated protein 1 light chain 3 alpha JBrowse link NW_004955422 26,774,466 26,776,024 RGD:9068941
G Map1lc3b microtubule associated protein 1 light chain 3 beta JBrowse link NW_004955541 1,852,388 1,868,194 RGD:9068941
G Map1lc3c microtubule associated protein 1 light chain 3 gamma JBrowse link NW_004955406 5,769,894 5,774,806 RGD:9068941
G Mcoln1 mucolipin 1 JBrowse link NW_004955563 1,703,408 1,712,908 RGD:9068941
G Mfsd8 major facilitator superfamily domain containing 8 JBrowse link NW_004955428 13,519,285 13,548,007 RGD:9068941
G Rubcnl rubicon like autophagy enhancer JBrowse link NW_004955431 140,999 206,570 RGD:9068941
G Snap29 synaptosome associated protein 29 JBrowse link NW_004955442 19,419,381 19,446,782 RGD:9068941
G Snapin SNAP associated protein JBrowse link NW_004955545 306,546 308,229 RGD:9068941
G Snx14 sorting nexin 14 JBrowse link NW_004955411 12,967,980 13,048,839 RGD:9068941
G Stx17 syntaxin 17 JBrowse link NW_004955419 25,674,771 25,741,357 RGD:9068941
G Tecpr1 tectonin beta-propeller repeat containing 1 JBrowse link NW_004955460 14,106,711 14,137,983 RGD:9068941
G Ubqln1 ubiquilin 1 JBrowse link NW_004955432 3,575,034 3,617,029 RGD:9068941
G Uvrag UV radiation resistance associated JBrowse link NW_004955414 15,733,116 16,043,555 RGD:9068941
G Vamp7 vesicle associated membrane protein 7 JBrowse link NW_004955594 20,496 72,648 RGD:9068941
G Vamp8 vesicle associated membrane protein 8 JBrowse link NW_004955424 1,922,830 1,926,844 RGD:9068941
G Vcp valosin containing protein JBrowse link NW_004955472 1,111,649 1,124,076 RGD:9068941
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog JBrowse link NW_004955438 1,320,862 1,351,344 RGD:9068941
G Vps16 VPS16 core subunit of CORVET and HOPS complexes JBrowse link NW_004955415 13,791,611 13,813,500 RGD:9068941
G Vps33a VPS33A core subunit of CORVET and HOPS complexes JBrowse link NW_004955482 6,333,282 6,352,369 RGD:9068941
G Vps33b VPS33B late endosome and lysosome associated JBrowse link NW_004955416 15,049,849 15,071,108 RGD:9068941
G Vti1b vesicle transport through interaction with t-SNAREs 1B JBrowse link NW_004955466 2,527,750 2,549,599 RGD:9068941
G Wipi2 WD repeat domain, phosphoinositide interacting 2 JBrowse link NW_004955460 10,090,343 10,132,724 RGD:9068941
autophagosome membrane docking term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atg14 autophagy related 14 JBrowse link NW_004955466 13,898,311 13,972,506 RGD:9068941
G Snap29 synaptosome associated protein 29 JBrowse link NW_004955442 19,419,381 19,446,782 RGD:9068941
G Stx17 syntaxin 17 JBrowse link NW_004955419 25,674,771 25,741,357 RGD:9068941
G Vamp8 vesicle associated membrane protein 8 JBrowse link NW_004955424 1,922,830 1,926,844 RGD:9068941
autophagosome organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp13a2 ATPase cation transporting 13A2 JBrowse link NW_004955527 1,805,854 1,823,623 RGD:9068941
G Gba glucosylceramidase beta JBrowse link NW_004955545 1,682,097 1,689,373 RGD:9068941
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha JBrowse link NW_004955414 31,896,161 31,999,730 RGD:9068941
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta JBrowse link NW_004955406 40,247,690 40,317,556 RGD:9068941
autophagosome-endosome fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rubcnl rubicon like autophagy enhancer JBrowse link NW_004955431 140,999 206,570 RGD:9068941
autophagosome-lysosome fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp13a2 ATPase cation transporting 13A2 JBrowse link NW_004955527 1,805,854 1,823,623 RGD:9068941
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link NW_004955493 6,696,520 6,707,849 RGD:9068941
G Rubcnl rubicon like autophagy enhancer JBrowse link NW_004955431 140,999 206,570 RGD:9068941
autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link NW_004955422 1,455,392 1,644,368 RGD:9068941
G Anxa7 annexin A7 JBrowse link NW_004955437 18,394,371 18,421,779 RGD:9068941
G Arsa arylsulfatase A JBrowse link NW_004955413 33,624,460 33,629,491 RGD:9068941
G Arsb arylsulfatase B JBrowse link NW_004955425 22,120,507 22,281,221 RGD:9068941
G Atg10 autophagy related 10 JBrowse link NW_004955418 28,118,843 28,368,358 RGD:9068941
G Atg12 autophagy related 12 JBrowse link NW_004955408 35,607,541 35,620,878 RGD:9068941
G Atg14 autophagy related 14 JBrowse link NW_004955466 13,898,311 13,972,506 RGD:9068941
G Atg16l2 autophagy related 16 like 2 JBrowse link NW_004955414 18,600,904 18,618,048 RGD:9068941
G Atg3 autophagy related 3 JBrowse link NW_004955427 12,881,454 12,906,399 RGD:9068941
G Atg4b autophagy related 4B cysteine peptidase JBrowse link NW_004955542 164,969 192,498 RGD:9068941
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Atg9a autophagy related 9A JBrowse link NW_004955453 14,203,798 14,214,760 RGD:9068941
G Atp13a2 ATPase cation transporting 13A2 JBrowse link NW_004955527 1,805,854 1,823,623 RGD:9068941
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G C9orf72 C9orf72-SMCR8 complex subunit JBrowse link NW_004955472 7,299,092 7,337,591 RGD:9068941
G Chmp4b charged multivesicular body protein 4B JBrowse link NW_004955422 27,482,239 27,526,798 RGD:9068941
G Ctsb cathepsin B JBrowse link NW_004955403 53,086,236 53,100,217 RGD:9068941
G Drd2 dopamine receptor D2 JBrowse link NW_004955412 15,054,255 15,114,558 RGD:9068941
G Drd3 dopamine receptor D3 JBrowse link NW_004955427 14,219,519 14,252,178 RGD:9068941
G Ei24 EI24 autophagy associated transmembrane protein JBrowse link NW_004955412 26,574,814 26,586,154 RGD:9068941
G Epg5 ectopic P-granules autophagy protein 5 homolog JBrowse link NW_004955402 31,422,848 31,532,189 RGD:9068941
G Epm2a EPM2A glucan phosphatase, laforin JBrowse link NW_004955436 14,925,452 14,982,357 RGD:9068941
G Gba glucosylceramidase beta JBrowse link NW_004955545 1,682,097 1,689,373 RGD:9068941
G Itgb4 integrin subunit beta 4 JBrowse link NW_004955506 6,493,466 6,526,778 RGD:9068941
G Lamp2 lysosomal associated membrane protein 2 JBrowse link NW_004955572 1,423,048 1,464,443 RGD:9068941
G LOC102011427 chromosome unknown open reading frame, human C19orf12 JBrowse link NW_004955468 7,903,438 7,914,038 RGD:9068941
G Map1lc3a microtubule associated protein 1 light chain 3 alpha JBrowse link NW_004955422 26,774,466 26,776,024 RGD:9068941
G Map1lc3b microtubule associated protein 1 light chain 3 beta JBrowse link NW_004955541 1,852,388 1,868,194 RGD:9068941
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 JBrowse link NW_004955483 8,078,796 8,079,612 RGD:9068941
G Npc1 NPC intracellular cholesterol transporter 1 JBrowse link NW_004955402 11,699,434 11,742,899 RGD:9068941
G Nrbf2 nuclear receptor binding factor 2 JBrowse link NW_004955425 16,330,115 16,336,798 RGD:9068941
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 JBrowse link NW_004955402 28,081,150 28,195,305 RGD:9068941
G Pmp22 peripheral myelin protein 22 JBrowse link NW_004955467 2,422,181 2,456,925 RGD:9068941
G Psen1 presenilin 1 JBrowse link NW_004955523 2,128,529 2,210,737 RGD:9068941
G Rab1a RAB1A, member RAS oncogene family JBrowse link NW_004955424 19,393,589 19,421,373 RGD:9068941
G Rb1cc1 RB1 inducible coiled-coil 1 JBrowse link NW_004955454 12,201,566 12,257,383 RGD:9068941
G S100a9 S100 calcium binding protein A9 JBrowse link NW_004955592 90,647 93,842 RGD:9068941
G Sqstm1 sequestosome 1 JBrowse link NW_004955408 757,426 764,989 RGD:9068941
G Srpx sushi repeat containing protein X-linked JBrowse link NW_004955601 286,092 364,235 RGD:9068941
G Syt11 synaptotagmin 11 JBrowse link NW_004955545 2,054,720 2,074,526 RGD:9068941
G Tbc1d5 TBC1 domain family member 5 JBrowse link NW_004955430 9,411,865 9,966,710 RGD:9068941
G Tecpr1 tectonin beta-propeller repeat containing 1 JBrowse link NW_004955460 14,106,711 14,137,983 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004955467 9,241,391 9,256,716 RGD:9068941
G Trappc4 trafficking protein particle complex 4 JBrowse link NW_004955412 20,129,154 20,133,043 RGD:9068941
G Trim17 tripartite motif containing 17 JBrowse link NW_004955581 107,251 113,907 RGD:9068941
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link NW_004955482 760,200 777,133 RGD:9068941
G Ulk2 unc-51 like autophagy activating kinase 2 JBrowse link NW_004955467 818,975 894,103 RGD:9068941
G Umod uromodulin JBrowse link NW_004955442 3,986,936 4,001,155 RGD:9068941
G Uvrag UV radiation resistance associated JBrowse link NW_004955414 15,733,116 16,043,555 RGD:9068941
G Vcp valosin containing protein JBrowse link NW_004955472 1,111,649 1,124,076 RGD:9068941
G Vmp1 vacuole membrane protein 1 JBrowse link NW_004955451 3,265,109 3,370,610 RGD:9068941
G Vps13a vacuolar protein sorting 13 homolog A JBrowse link NW_004955512 2,037,803 2,267,197 RGD:9068941
G Vps39 VPS39 subunit of HOPS complex JBrowse link NW_004955416 8,893,249 8,936,351 RGD:9068941
G Vps51 VPS51 subunit of GARP complex JBrowse link NW_004955422 20,091,682 20,102,371 RGD:9068941
G Vti1a vesicle transport through interaction with t-SNAREs 1A JBrowse link NW_004955431 17,542,605 17,910,809 RGD:9068941
G Wdr45 WD repeat domain 45 JBrowse link NW_004955543 597,796 604,163 RGD:9068941
G Wipi1 WD repeat domain, phosphoinositide interacting 1 JBrowse link NW_004955478 4,309,975 4,341,107 RGD:9068941
autophagy of mitochondrion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link NW_004955422 1,455,392 1,644,368 RGD:9068941
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G Capn10 calpain 10 JBrowse link NW_004955542 874,083 885,085 RGD:9068941
G Cisd2 CDGSH iron sulfur domain 2 JBrowse link NW_004955496 5,656,686 5,672,888 RGD:9068941
G Ctsk cathepsin K JBrowse link NW_004955588 149,036 158,093 RGD:9068941
G Fbxo7 F-box protein 7 JBrowse link NW_004955405 41,429,421 41,449,670 RGD:9068941
G Fis1 fission, mitochondrial 1 JBrowse link NW_004955456 16,057,158 16,060,623 RGD:9068941
G Fundc1 FUN14 domain containing 1 JBrowse link NW_004955516 3,648,629 3,664,032 RGD:9068941
G Map1lc3a microtubule associated protein 1 light chain 3 alpha JBrowse link NW_004955422 26,774,466 26,776,024 RGD:9068941
G Map1lc3b microtubule associated protein 1 light chain 3 beta JBrowse link NW_004955541 1,852,388 1,868,194 RGD:9068941
G Pink1 PTEN induced kinase 1 JBrowse link NW_004955452 1,171,115 1,186,338 RGD:9068941
G Ppargc1a PPARG coactivator 1 alpha JBrowse link NW_004955480 543,397 1,188,376 RGD:9068941
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004955439 18,664,230 19,953,358 RGD:9068941
G Slc25a46 solute carrier family 25 member 46 JBrowse link NW_004955418 4,316,790 4,342,748 RGD:9068941
G Usp30 ubiquitin specific peptidase 30 JBrowse link NW_004955455 10,234,779 10,257,959 RGD:9068941
autophagy of peroxisome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acbd5 acyl-CoA binding domain containing 5 JBrowse link NW_004955429 2,623,042 2,661,182 RGD:9068941
chaperone-mediated autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Bag3 BAG cochaperone 3 JBrowse link NW_004955551 446,322 468,329 RGD:9068941
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link NW_004955412 23,863,513 23,867,984 RGD:9068941
G Lamp2 lysosomal associated membrane protein 2 JBrowse link NW_004955572 1,423,048 1,464,443 RGD:9068941
G Stub1 STIP1 homology and U-box containing protein 1 JBrowse link NW_004955442 16,521,130 16,523,733 RGD:9068941
G Synpo2 synaptopodin 2 JBrowse link NW_004955428 21,152,210 21,323,254 RGD:9068941
chaperone-mediated protein transport involved in chaperone-mediated autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link NW_004955412 23,863,513 23,867,984 RGD:9068941
engulfment of target by autophagosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link NW_004955460 14,774,545 14,860,783 RGD:9068941
glycophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Stbd1 starch binding domain 1 JBrowse link NW_004955433 1,036,265 1,038,652 RGD:9068941
induction by virus of host autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 JBrowse link NW_004955416 6,897,897 7,005,602 RGD:9068941
G Phb2 prohibitin 2 JBrowse link NW_004955413 4,557,969 4,563,697 RGD:9068941
late endosomal microautophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link NW_004955412 23,863,513 23,867,984 RGD:9068941
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link NW_004955484 7,368,938 7,375,964 RGD:9068941
G Vps4b vacuolar protein sorting 4 homolog B JBrowse link NW_004955402 47,154,350 47,183,979 RGD:9068941
lipophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor JBrowse link NW_004955424 11,259,288 11,262,413 RGD:9068941
G Rab7a RAB7A, member RAS oncogene family JBrowse link NW_004955429 15,103,792 15,167,498 RGD:9068941
macroautophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acbd5 acyl-CoA binding domain containing 5 JBrowse link NW_004955429 2,623,042 2,661,182 RGD:9068941
G Atg14 autophagy related 14 JBrowse link NW_004955466 13,898,311 13,972,506 RGD:9068941
G Atg3 autophagy related 3 JBrowse link NW_004955427 12,881,454 12,906,399 RGD:9068941
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link NW_004955493 6,696,520 6,707,849 RGD:9068941
G Hdac10 histone deacetylase 10 JBrowse link NW_004955413 33,272,600 33,277,893 RGD:9068941
G Map1lc3a microtubule associated protein 1 light chain 3 alpha JBrowse link NW_004955422 26,774,466 26,776,024 RGD:9068941
G Map1lc3b microtubule associated protein 1 light chain 3 beta JBrowse link NW_004955541 1,852,388 1,868,194 RGD:9068941
G Map1lc3c microtubule associated protein 1 light chain 3 gamma JBrowse link NW_004955406 5,769,894 5,774,806 RGD:9068941
G Nbr1 NBR1 autophagy cargo receptor JBrowse link NW_004955451 16,871,091 16,896,090 RGD:9068941
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha JBrowse link NW_004955414 31,896,161 31,999,730 RGD:9068941
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta JBrowse link NW_004955406 40,247,690 40,317,556 RGD:9068941
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 JBrowse link NW_004955402 28,081,150 28,195,305 RGD:9068941
G Plaa phospholipase A2 activating protein JBrowse link NW_004955472 7,879,196 7,915,040 RGD:9068941
G Sqstm1 sequestosome 1 JBrowse link NW_004955408 757,426 764,989 RGD:9068941
G Tbc1d5 TBC1 domain family member 5 JBrowse link NW_004955430 9,411,865 9,966,710 RGD:9068941
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 JBrowse link NW_004955422 17,768,469 17,778,976 RGD:9068941
G Tmem74 transmembrane protein 74 JBrowse link NW_004955417 31,328,352 31,334,228 RGD:9068941
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 JBrowse link NW_004955422 26,640,239 26,649,291 RGD:9068941
G Ubqln1 ubiquilin 1 JBrowse link NW_004955432 3,575,034 3,617,029 RGD:9068941
G Ubxn6 UBX domain protein 6 JBrowse link NW_004955495 4,456,182 4,465,954 RGD:9068941
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link NW_004955482 760,200 777,133 RGD:9068941
G Vcp valosin containing protein JBrowse link NW_004955472 1,111,649 1,124,076 RGD:9068941
G Zfyve1 zinc finger FYVE-type containing 1 JBrowse link NW_004955523 2,334,175 2,388,612 RGD:9068941
mitophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link NW_004955422 1,455,392 1,644,368 RGD:9068941
G Atg13 autophagy related 13 JBrowse link NW_004955422 1,398,646 1,432,440 RGD:9068941
G Atg14 autophagy related 14 JBrowse link NW_004955466 13,898,311 13,972,506 RGD:9068941
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G Map1lc3b microtubule associated protein 1 light chain 3 beta JBrowse link NW_004955541 1,852,388 1,868,194 RGD:9068941
G Phb2 prohibitin 2 JBrowse link NW_004955413 4,557,969 4,563,697 RGD:9068941
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004955439 18,664,230 19,953,358 RGD:9068941
G Sqstm1 sequestosome 1 JBrowse link NW_004955408 757,426 764,989 RGD:9068941
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link NW_004955482 760,200 777,133 RGD:9068941
mitophagy by induced vacuole formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spata18 spermatogenesis associated 18 JBrowse link NW_004955447 18,401,881 18,437,878 RGD:9068941
negative regulation of autophagosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G Chmp4b charged multivesicular body protein 4B JBrowse link NW_004955422 27,482,239 27,526,798 RGD:9068941
G Ehmt2 euchromatic histone lysine methyltransferase 2 JBrowse link NW_004955437 396,736 411,144 RGD:9068941
G Fez1 fasciculation and elongation protein zeta 1 JBrowse link NW_004955412 26,477,995 26,530,686 RGD:9068941
G Fez2 fasciculation and elongation protein zeta 2 JBrowse link NW_004955441 4,421,936 4,456,070 RGD:9068941
G Lrrk2 leucine rich repeat kinase 2 JBrowse link NW_004955505 84,324 216,923 RGD:9068941
G Mtm1 myotubularin 1 JBrowse link NW_004955498 6,329,402 6,444,708 RGD:9068941
G Nupr1 nuclear protein 1, transcriptional regulator JBrowse link NW_004955493 6,746,380 6,747,763 RGD:9068941
G Phf23 PHD finger protein 23 JBrowse link NW_004955467 9,671,133 9,675,434 RGD:9068941
G Pink1 PTEN induced kinase 1 JBrowse link NW_004955452 1,171,115 1,186,338 RGD:9068941
G Scfd1 sec1 family domain containing 1 JBrowse link NW_004955409 29,805,909 29,903,208 RGD:9068941
G Sec22b SEC22 homolog B, vesicle trafficking protein JBrowse link NW_004955568 1,559,519 1,587,782 RGD:9068941
G Smcr8 SMCR8-C9orf72 complex subunit JBrowse link NW_004955478 11,002,174 11,015,123 RGD:9068941
G Tmem39a transmembrane protein 39A JBrowse link NW_004955427 19,118,631 19,184,315 RGD:9068941
negative regulation of autophagosome maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clec16a C-type lectin domain containing 16A JBrowse link NW_004955442 7,369,616 7,584,052 RGD:9068941
G Phf23 PHD finger protein 23 JBrowse link NW_004955467 9,671,133 9,675,434 RGD:9068941
G Rubcn rubicon autophagy regulator JBrowse link NW_004955420 12,124,193 12,187,154 RGD:9068941
G Tmem39a transmembrane protein 39A JBrowse link NW_004955427 19,118,631 19,184,315 RGD:9068941
G Ubqln4 ubiquilin 4 JBrowse link NW_004955545 2,218,794 2,236,665 RGD:9068941
negative regulation of autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adra1a adrenoceptor alpha 1A JBrowse link NW_004955403 49,394,173 49,485,881 RGD:9068941
G Akt1 AKT serine/threonine kinase 1 JBrowse link NW_004955538 3,208,711 3,224,386 RGD:9068941
G Bcl2 BCL2 apoptosis regulator JBrowse link NW_004955402 46,911,125 47,084,214 RGD:9068941
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G Bmf Bcl2 modifying factor JBrowse link NW_004955416 7,048,654 7,068,917 RGD:9068941
G Cptp ceramide-1-phosphate transfer protein JBrowse link NW_004955486 9,475,520 9,478,925 RGD:9068941
G Dap death associated protein JBrowse link NW_004955426 398,593 452,004 RGD:9068941
G Eif4e eukaryotic translation initiation factor 4E JBrowse link NW_004955405 9,122,960 9,159,095 RGD:9068941
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 JBrowse link NW_004955420 23,161,541 23,179,788 RGD:9068941
G Eif4g2 eukaryotic translation initiation factor 4 gamma 2 JBrowse link NW_004955414 26,389,125 26,399,916 RGD:9068941
G Eif4g3 eukaryotic translation initiation factor 4 gamma 3 JBrowse link NW_004955452 1,328,103 1,625,341 RGD:9068941
G Foxk1 forkhead box K1 JBrowse link NW_004955460 11,011,498 11,067,443 RGD:9068941
G Foxk2 forkhead box K2 JBrowse link NW_004955506 567,770 614,505 RGD:9068941
G Gata4 GATA binding protein 4 JBrowse link NW_004955403 52,958,318 53,029,267 RGD:9068941
G Golga2 golgin A2 JBrowse link NW_004955570 782,218 799,044 RGD:9068941
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 JBrowse link NW_004955450 11,525,245 11,719,992 RGD:9068941
G Htr2b 5-hydroxytryptamine receptor 2B JBrowse link NW_004955453 4,352,278 4,367,807 RGD:9068941
G Il10 interleukin 10 JBrowse link NW_004955406 42,307,789 42,312,255 RGD:9068941
G Il10ra interleukin 10 receptor subunit alpha JBrowse link NW_004955412 19,182,536 19,197,083 RGD:9068941
G Kdm4a lysine demethylase 4A JBrowse link NW_004955537 3,199,394 3,255,945 RGD:9068941
G Kif25 kinesin family member 25 JBrowse link NW_004955439 14,282,985 14,311,330 RGD:9068941
G Klhl22 kelch like family member 22 JBrowse link NW_004955442 19,010,971 19,051,300 RGD:9068941
G Lep leptin JBrowse link NW_004955479 9,266,604 9,276,568 RGD:9068941
G Lepr leptin receptor JBrowse link NW_004955423 25,108,897 25,185,315 RGD:9068941
G Mcl1 MCL1 apoptosis regulator, BCL2 family member JBrowse link NW_004955413 238,043 243,317 RGD:9068941
G Mtmr8 myotubularin related protein 8 JBrowse link NW_004955475 4,358,264 4,391,349 RGD:9068941
G Mtmr9 myotubularin related protein 9 JBrowse link NW_004955403 52,689,101 52,732,354 RGD:9068941
G Mtor mechanistic target of rapamycin kinase JBrowse link NW_004955486 2,487,642 2,599,694 RGD:9068941
G Nampt nicotinamide phosphoribosyltransferase JBrowse link NW_004955410 10,717,664 10,742,109 RGD:9068941
G Nupr1 nuclear protein 1, transcriptional regulator JBrowse link NW_004955493 6,746,380 6,747,763 RGD:9068941
G Ptk2 protein tyrosine kinase 2 JBrowse link NW_004955461 14,337,914 14,622,779 RGD:9068941
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 JBrowse link NW_004955435 17,082,762 17,139,067 RGD:9068941
G Rasip1 Ras interacting protein 1 JBrowse link NW_004955559 1,830,574 1,844,107 RGD:9068941
G Rnf5 ring finger protein 5 JBrowse link NW_004955437 643,133 645,528 RGD:9068941
G Rraga Ras related GTP binding A JBrowse link NW_004955434 21,509,528 21,510,885 RGD:9068941
G Rubcn rubicon autophagy regulator JBrowse link NW_004955420 12,124,193 12,187,154 RGD:9068941
G Sirt2 sirtuin 2 JBrowse link NW_004955468 626,365 644,441 RGD:9068941
G Stat3 signal transducer and activator of transcription 3 JBrowse link NW_004955451 16,320,326 16,348,505 RGD:9068941
G Tbc1d14 TBC1 domain family member 14 JBrowse link NW_004955514 3,485,975 3,553,840 RGD:9068941
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link NW_004955437 7,780,886 7,785,597 RGD:9068941
G Wdr6 WD repeat domain 6 JBrowse link NW_004955532 1,029,857 1,039,020 RGD:9068941
negative regulation of autophagy of mitochondrion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pink1 PTEN induced kinase 1 JBrowse link NW_004955452 1,171,115 1,186,338 RGD:9068941
G Tspo translocator protein JBrowse link NW_004955413 28,309,105 28,315,075 RGD:9068941
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctsa cathepsin A JBrowse link NW_004955445 11,399,151 11,405,069 RGD:9068941
G Snca synuclein alpha JBrowse link NW_004955405 854,011 962,741 RGD:9068941
negative regulation of macroautophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hmox1 heme oxygenase 1 JBrowse link NW_004955405 43,124,447 43,128,873 RGD:9068941
G Lrrk2 leucine rich repeat kinase 2 JBrowse link NW_004955505 84,324 216,923 RGD:9068941
G Lzts1 leucine zipper tumor suppressor 1 JBrowse link NW_004955403 43,909,722 43,962,965 RGD:9068941
G Mtor mechanistic target of rapamycin kinase JBrowse link NW_004955486 2,487,642 2,599,694 RGD:9068941
G Npc1 NPC intracellular cholesterol transporter 1 JBrowse link NW_004955402 11,699,434 11,742,899 RGD:9068941
G Nrbp2 nuclear receptor binding protein 2 JBrowse link NW_004955454 2,500,360 2,507,372 RGD:9068941
G Pink1 PTEN induced kinase 1 JBrowse link NW_004955452 1,171,115 1,186,338 RGD:9068941
G Poldip2 DNA polymerase delta interacting protein 2 JBrowse link NW_004955481 4,776,721 4,785,817 RGD:9068941
G Qsox1 quiescin sulfhydryl oxidase 1 JBrowse link NW_004955406 19,363,938 19,402,134 RGD:9068941
G Smcr8 SMCR8-C9orf72 complex subunit JBrowse link NW_004955478 11,002,174 11,015,123 RGD:9068941
G Tsc1 TSC complex subunit 1 JBrowse link NW_004955513 2,197,037 2,244,992 RGD:9068941
G Tsc2 TSC complex subunit 2 JBrowse link NW_004955442 15,178,356 15,216,978 RGD:9068941
G Usp36 ubiquitin specific peptidase 36 JBrowse link NW_004955506 3,824,598 3,861,919 RGD:9068941
negative regulation of macroautophagy by TORC1 signaling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clec16a C-type lectin domain containing 16A JBrowse link NW_004955442 7,369,616 7,584,052 RGD:9068941
negative regulation of mitophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clec16a C-type lectin domain containing 16A JBrowse link NW_004955442 7,369,616 7,584,052 RGD:9068941
G Rnf41 ring finger protein 41 JBrowse link NW_004955458 3,799,450 3,833,269 RGD:9068941
G Tigar TP53 induced glycolysis regulatory phosphatase JBrowse link NW_004955413 2,129,719 2,153,873 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004955467 9,241,391 9,256,716 RGD:9068941
G Usp30 ubiquitin specific peptidase 30 JBrowse link NW_004955455 10,234,779 10,257,959 RGD:9068941
negative regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Htra2 HtrA serine peptidase 2 JBrowse link NW_004955424 11,255,756 11,259,170 RGD:9068941
negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vps13c vacuolar protein sorting 13 homolog C JBrowse link NW_004955450 13,016,933 13,178,797 RGD:9068941
parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hdac6 histone deacetylase 6 JBrowse link NW_004955543 348,314 378,391 RGD:9068941
G Mfn2 mitofusin 2 JBrowse link NW_004955486 1,937,873 1,962,577 RGD:9068941
G Optn optineurin JBrowse link NW_004955462 1,098,118 1,150,291 RGD:9068941
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004955439 18,664,230 19,953,358 RGD:9068941
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link NW_004955460 14,774,545 14,860,783 RGD:9068941
positive regulation by symbiont of host autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Irgm immunity related GTPase M JBrowse link NW_004955408 2,338,510 2,344,566 RGD:9068941
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link NW_004955482 760,200 777,133 RGD:9068941
G Ulk2 unc-51 like autophagy activating kinase 2 JBrowse link NW_004955467 818,975 894,103 RGD:9068941
positive regulation of aggrephagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bag3 BAG cochaperone 3 JBrowse link NW_004955551 446,322 468,329 RGD:9068941
G Hspb8 heat shock protein family B (small) member 8 JBrowse link NW_004955455 12,290,884 12,304,588 RGD:9068941
G Htt huntingtin JBrowse link NW_004955514 1,906,189 2,042,357 RGD:9068941
positive regulation of autophagosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 JBrowse link NW_004955435 12,531,651 12,626,969 RGD:9068941
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 JBrowse link NW_004955419 1,121,127 1,154,356 RGD:9068941
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha JBrowse link NW_004955429 6,231,135 6,399,672 RGD:9068941
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta JBrowse link NW_004955451 13,842,814 13,856,301 RGD:9068941
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma JBrowse link NW_004955458 5,315,083 5,327,617 RGD:9068941
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 JBrowse link NW_004955440 2,551,015 2,645,938 RGD:9068941
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 JBrowse link NW_004955520 3,411,504 3,483,703 RGD:9068941
G Ralb RAS like proto-oncogene B JBrowse link NW_004955459 9,533,081 9,574,464 RGD:9068941
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 JBrowse link NW_004955423 7,393,186 7,414,199 RGD:9068941
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link NW_004955482 760,200 777,133 RGD:9068941
positive regulation of autophagosome maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adrb2 adrenoceptor beta 2 JBrowse link NW_004955415 5,515,157 5,517,198 RGD:9068941
G Calcoco2 calcium binding and coiled-coil domain 2 JBrowse link NW_004955451 12,443,262 12,469,608 RGD:9068941
G Clec16a C-type lectin domain containing 16A JBrowse link NW_004955442 7,369,616 7,584,052 RGD:9068941
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 JBrowse link NW_004955420 26,019,621 26,076,846 RGD:9068941
G Irgm immunity related GTPase M JBrowse link NW_004955408 2,338,510 2,344,566 RGD:9068941
G Smcr8 SMCR8-C9orf72 complex subunit JBrowse link NW_004955478 11,002,174 11,015,123 RGD:9068941
positive regulation of autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ager advanced glycosylation end-product specific receptor JBrowse link NW_004955437 645,482 648,607 RGD:9068941
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link NW_004955422 1,455,392 1,644,368 RGD:9068941
G Atg16l1 autophagy related 16 like 1 JBrowse link NW_004955453 2,884,497 2,917,581 RGD:9068941
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
G Becn1 beclin 1 JBrowse link NW_004955451 16,616,595 16,625,731 RGD:9068941
G Dapk1 death associated protein kinase 1 JBrowse link NW_004955432 29,925 254,327 RGD:9068941
G Dcn decorin JBrowse link NW_004955405 28,335,493 28,371,912 RGD:9068941
G Dhrsx dehydrogenase/reductase X-linked JBrowse link NW_004955499 1,360,636 1,471,141 RGD:9068941
G Flcn folliculin JBrowse link NW_004955577 672,774 694,140 RGD:9068941
G Foxo1 forkhead box O1 JBrowse link NW_004955431 5,797,359 5,890,758 RGD:9068941
G Foxo3 forkhead box O3 JBrowse link NW_004955411 33,655,958 33,770,829 RGD:9068941
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link NW_004955555 668,641 676,351 RGD:9068941
G Gsk3b glycogen synthase kinase 3 beta JBrowse link NW_004955427 19,489,972 19,671,137 RGD:9068941
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link NW_004955466 8,000,311 8,022,497 RGD:9068941
G Hmgb1 high mobility group box 1 JBrowse link NW_004955431 15,373,207 15,377,339 RGD:9068941
G Ifng interferon gamma JBrowse link NW_004955458 14,643,333 14,648,020 RGD:9068941
G Irgm immunity related GTPase M JBrowse link NW_004955408 2,338,510 2,344,566 RGD:9068941
G Kat5 lysine acetyltransferase 5 JBrowse link NW_004955422 19,557,498 19,565,044 RGD:9068941
G Lrrk2 leucine rich repeat kinase 2 JBrowse link NW_004955505 84,324 216,923 RGD:9068941
G Map2k1 mitogen-activated protein kinase kinase 1 JBrowse link NW_004955450 9,181,851 9,205,277 RGD:9068941
G Mefv MEFV innate immuity regulator, pyrin JBrowse link NW_004955442 14,068,436 14,093,889 RGD:9068941
G Mid2 midline 2 JBrowse link NW_004955490 7,977,771 8,168,912 RGD:9068941
G Mtdh metadherin JBrowse link NW_004955417 13,479,398 13,540,706 RGD:9068941
G Optn optineurin JBrowse link NW_004955462 1,098,118 1,150,291 RGD:9068941
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 JBrowse link NW_004955451 14,621,565 14,627,556 RGD:9068941
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha JBrowse link NW_004955414 31,896,161 31,999,730 RGD:9068941
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase JBrowse link NW_004955543 444,314 449,201 RGD:9068941
G Plekhf1 pleckstrin homology and FYVE domain containing 1 JBrowse link NW_004955468 7,934,024 7,943,499 RGD:9068941
G Plk2 polo like kinase 2 JBrowse link NW_004955446 9,671,090 9,676,956 RGD:9068941
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link NW_004955426 25,079,718 25,102,090 RGD:9068941
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 JBrowse link NW_004955464 2,996,608 3,062,197 RGD:9068941
G Prkd1 protein kinase D1 JBrowse link NW_004955409 30,554,095 30,860,588 RGD:9068941
G Rnf152 ring finger protein 152 JBrowse link NW_004955402 45,774,565 45,846,649 RGD:9068941
G Rock1 Rho associated coiled-coil containing protein kinase 1 JBrowse link NW_004955402 9,752,101 9,864,317 RGD:9068941
G Sh3bp4 SH3 domain binding protein 4 JBrowse link NW_004955453 1,387,954 1,425,268 RGD:9068941
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 JBrowse link NW_004955423 7,393,186 7,414,199 RGD:9068941
G Stk11 serine/threonine kinase 11 JBrowse link NW_004955495 6,678,195 6,699,408 RGD:9068941
G Svip small VCP interacting protein JBrowse link NW_004955476 3,231,789 3,236,602 RGD:9068941
G Tfeb transcription factor EB JBrowse link NW_004955437 8,102,241 8,141,001 RGD:9068941
G Ticam1 toll like receptor adaptor molecule 1 JBrowse link NW_004955495 4,197,083 4,204,999 RGD:9068941
G Tlr9 toll like receptor 9 JBrowse link NW_004955532 3,828,645 3,832,699 RGD:9068941
G Tmem59 transmembrane protein 59 JBrowse link NW_004955464 5,193,173 5,222,089 RGD:9068941
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 JBrowse link NW_004955417 11,063,217 11,079,389 RGD:9068941
G Tpcn1 two pore segment channel 1 JBrowse link NW_004955482 9,538,572 9,594,739 RGD:9068941
G Trim21 tripartite motif containing 21 JBrowse link NW_004955414 20,066,109 20,077,331 RGD:9068941
G Trim65 tripartite motif containing 65 JBrowse link NW_004955506 6,362,360 6,366,743 RGD:9068941
G Trim8 tripartite motif containing 8 JBrowse link NW_004955485 7,784,625 7,798,131 RGD:9068941
G Tsc2 TSC complex subunit 2 JBrowse link NW_004955442 15,178,356 15,216,978 RGD:9068941
G Ufl1 UFM1 specific ligase 1 JBrowse link NW_004955411 22,548,139 22,577,287 RGD:9068941
G Ulk1 unc-51 like autophagy activating kinase 1 JBrowse link NW_004955482 760,200 777,133 RGD:9068941
G Xbp1 X-box binding protein 1 JBrowse link NW_004955455 3,037,885 3,041,827 RGD:9068941
G Zc3h12a zinc finger CCCH-type containing 12A JBrowse link NW_004955452 15,306,398 15,314,959 RGD:9068941
positive regulation of autophagy in response to ER overload term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2l11 BCL2 like 11 JBrowse link NW_004955470 2,740,682 2,780,225 RGD:9068941
G Bid BH3 interacting domain death agonist JBrowse link NW_004955454 5,776,656 5,785,500 RGD:9068941
G Ddit3 DNA damage inducible transcript 3 JBrowse link NW_004955458 5,232,979 5,238,513 RGD:9068941
positive regulation of autophagy of mitochondrion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bnip3 BCL2 interacting protein 3 JBrowse link NW_004955477 9,621,812 9,630,406 RGD:9068941
G Fbxo7 F-box protein 7 JBrowse link NW_004955405 41,429,421 41,449,670 RGD:9068941
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link NW_004955466 8,000,311 8,022,497 RGD:9068941
G Htt huntingtin JBrowse link NW_004955514 1,906,189 2,042,357 RGD:9068941
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004955439 18,664,230 19,953,358 RGD:9068941
positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp5if1 ATP synthase inhibitory factor subunit 1 JBrowse link NW_004955452 7,372,917 7,375,072 RGD:9068941
G Gba glucosylceramidase beta JBrowse link NW_004955545 1,682,097 1,689,373 RGD:9068941
G Hk2 hexokinase 2 JBrowse link NW_004955424 10,897,528 10,966,025 RGD:9068941
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 JBrowse link NW_004955452 1,059,168 1,066,096 RGD:9068941
G Pink1 PTEN induced kinase 1 JBrowse link NW_004955452 1,171,115 1,186,338 RGD:9068941
positive regulation of chaperone-mediated autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plk3 polo like kinase 3 JBrowse link NW_004955464 13,419,562 13,424,104 RGD:9068941
positive regulation of lipophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adrb2 adrenoceptor beta 2 JBrowse link NW_004955415 5,515,157 5,517,198 RGD:9068941
G Htt huntingtin JBrowse link NW_004955514 1,906,189 2,042,357 RGD:9068941
G Sesn2 sestrin 2 JBrowse link NW_004955452 7,392,644 7,417,204 RGD:9068941
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 JBrowse link NW_004955515 57,711 161,012 RGD:9068941
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 JBrowse link NW_004955438 1,385,431 1,491,534 RGD:9068941
positive regulation of macroautophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bnip3 BCL2 interacting protein 3 JBrowse link NW_004955477 9,621,812 9,630,406 RGD:9068941
G Bnip3l BCL2 interacting protein 3 like JBrowse link NW_004955403 49,122,408 49,144,162 RGD:9068941
G C9orf72 C9orf72-SMCR8 complex subunit JBrowse link NW_004955472 7,299,092 7,337,591 RGD:9068941
G Dcn decorin JBrowse link NW_004955405 28,335,493 28,371,912 RGD:9068941
G Epm2a EPM2A glucan phosphatase, laforin JBrowse link NW_004955436 14,925,452 14,982,357 RGD:9068941
G Gnai3 G protein subunit alpha i3 JBrowse link NW_004955435 12,965,006 13,005,614 RGD:9068941
G Gpsm1 G protein signaling modulator 1 JBrowse link NW_004955513 4,363,534 4,387,356 RGD:9068941
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link NW_004955466 8,000,311 8,022,497 RGD:9068941
G Hmox1 heme oxygenase 1 JBrowse link NW_004955405 43,124,447 43,128,873 RGD:9068941
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma JBrowse link NW_004955580 1,053,823 1,069,802 RGD:9068941
G Il4 interleukin 4 JBrowse link NW_004955408 4,058,052 4,065,999 RGD:9068941
G Kdr kinase insert domain receptor JBrowse link NW_004955447 15,810,816 15,851,702 RGD:9068941
G Larp1 La ribonucleoprotein 1, translational regulator JBrowse link NW_004955408 9,002,443 9,080,938 RGD:9068941
G Map3k7 mitogen-activated protein kinase kinase kinase 7 JBrowse link NW_004955411 17,177,335 17,229,957 RGD:9068941
G Pafah1b2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 JBrowse link NW_004955412 18,471,621 18,494,082 RGD:9068941
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase JBrowse link NW_004955543 444,314 449,201 RGD:9068941
G Pink1 PTEN induced kinase 1 JBrowse link NW_004955452 1,171,115 1,186,338 RGD:9068941
G Rab12 RAB12, member RAS oncogene family JBrowse link NW_004955402 3,102,709 3,109,701 RGD:9068941
G Rufy4 RUN and FYVE domain containing 4 JBrowse link NW_004955453 15,243,125 15,259,086 RGD:9068941
G Scoc short coiled-coil protein JBrowse link NW_004955428 3,404,372 3,435,653 RGD:9068941
G Sesn2 sestrin 2 JBrowse link NW_004955452 7,392,644 7,417,204 RGD:9068941
G Sirt1 sirtuin 1 JBrowse link NW_004955425 20,280,725 20,307,663 RGD:9068941
G Sting1 stimulator of interferon response cGAMP interactor 1 JBrowse link NW_004955418 1,091,022 1,097,064 RGD:9068941
G Supt5h SPT5 homolog, DSIF elongation factor subunit JBrowse link NW_004955468 95,997 123,005 RGD:9068941
G Tbk1 TANK binding kinase 1 JBrowse link NW_004955458 11,210,120 11,263,632 RGD:9068941
G Trim13 tripartite motif containing 13 JBrowse link NW_004955431 3,324,331 3,395,724 RGD:9068941
G Tsc1 TSC complex subunit 1 JBrowse link NW_004955513 2,197,037 2,244,992 RGD:9068941
G Tsc2 TSC complex subunit 2 JBrowse link NW_004955442 15,178,356 15,216,978 RGD:9068941
G Wac WW domain containing adaptor with coiled-coil JBrowse link NW_004955462 2,358,842 2,435,644 RGD:9068941
positive regulation of mitophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004955439 18,664,230 19,953,358 RGD:9068941
G Vps13d vacuolar protein sorting 13 homolog D JBrowse link NW_004955486 1,515,630 1,772,107 RGD:9068941
positive regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdc37 cell division cycle 37, HSP90 cochaperone JBrowse link NW_004955495 1,642,467 1,651,288 RGD:9068941
G Hdac6 histone deacetylase 6 JBrowse link NW_004955543 348,314 378,391 RGD:9068941
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 JBrowse link NW_004955475 550,643 671,771 RGD:9068941
G Pink1 PTEN induced kinase 1 JBrowse link NW_004955452 1,171,115 1,186,338 RGD:9068941
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004955439 18,664,230 19,953,358 RGD:9068941
G Tomm7 translocase of outer mitochondrial membrane 7 JBrowse link NW_004955410 25,157,860 25,166,898 RGD:9068941
positive regulation of xenophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 JBrowse link NW_004955419 1,121,127 1,154,356 RGD:9068941
G Mapk3 mitogen-activated protein kinase 3 JBrowse link NW_004955493 6,870,699 6,876,836 RGD:9068941
G Nod1 nucleotide binding oligomerization domain containing 1 JBrowse link NW_004955410 31,681,191 31,725,173 RGD:9068941
G Nod2 nucleotide binding oligomerization domain containing 2 JBrowse link NW_004955433 8,746,213 8,780,119 RGD:9068941
G Optn optineurin JBrowse link NW_004955462 1,098,118 1,150,291 RGD:9068941
G Ripk2 receptor interacting serine/threonine kinase 2 JBrowse link NW_004955417 6,669,675 6,698,142 RGD:9068941
G Tbk1 TANK binding kinase 1 JBrowse link NW_004955458 11,210,120 11,263,632 RGD:9068941
G Tlr2 toll like receptor 2 JBrowse link NW_004955471 8,011,710 8,019,063 RGD:9068941
protein lipidation involved in autophagosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atg16l1 autophagy related 16 like 1 JBrowse link NW_004955453 2,884,497 2,917,581 RGD:9068941
G Atg5 autophagy related 5 JBrowse link NW_004955411 31,501,191 31,646,407 RGD:9068941
G Irgm immunity related GTPase M JBrowse link NW_004955408 2,338,510 2,344,566 RGD:9068941
G Wipi2 WD repeat domain, phosphoinositide interacting 2 JBrowse link NW_004955460 10,090,343 10,132,724 RGD:9068941
protein localization to phagophore assembly site term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atg16l1 autophagy related 16 like 1 JBrowse link NW_004955453 2,884,497 2,917,581 RGD:9068941
G Mfn2 mitofusin 2 JBrowse link NW_004955486 1,937,873 1,962,577 RGD:9068941
G Pacs2 phosphofurin acidic cluster sorting protein 2 JBrowse link NW_004955538 3,559,738 3,616,862 RGD:9068941
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 JBrowse link NW_004955402 28,081,150 28,195,305 RGD:9068941
G Stx17 syntaxin 17 JBrowse link NW_004955419 25,674,771 25,741,357 RGD:9068941
G Wipi2 WD repeat domain, phosphoinositide interacting 2 JBrowse link NW_004955460 10,090,343 10,132,724 RGD:9068941
protein targeting to lysosome involved in chaperone-mediated autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link NW_004955412 23,863,513 23,867,984 RGD:9068941
G Lamp2 lysosomal associated membrane protein 2 JBrowse link NW_004955572 1,423,048 1,464,443 RGD:9068941
protein targeting to vacuole involved in autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link NW_004955460 14,774,545 14,860,783 RGD:9068941
regulation of autophagosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C9orf72 C9orf72-SMCR8 complex subunit JBrowse link NW_004955472 7,299,092 7,337,591 RGD:9068941
G Ift20 intraflagellar transport 20 JBrowse link NW_004955481 4,799,548 4,807,751 RGD:9068941
G Ift88 intraflagellar transport 88 JBrowse link NW_004955497 1,338,959 1,454,788 RGD:9068941
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing JBrowse link NW_004955457 6,749,226 6,841,855 RGD:9068941
G Rab1b RAB1B, member RAS oncogene family JBrowse link NW_004955422 19,039,741 19,047,088 RGD:9068941
G Rnf5 ring finger protein 5 JBrowse link NW_004955437 643,133 645,528 RGD:9068941
G Tbc1d14 TBC1 domain family member 14 JBrowse link NW_004955514 3,485,975 3,553,840 RGD:9068941
G Ubqln2 ubiquilin 2 JBrowse link NW_004955475 3,260,209 3,263,586 RGD:9068941
regulation of autophagosome maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link NW_004955493 6,696,520 6,707,849 RGD:9068941
G Tbc1d25 TBC1 domain family member 25 JBrowse link NW_004955543 127,314 154,235 RGD:9068941
regulation of autophagosome size term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp13a2 ATPase cation transporting 13A2 JBrowse link NW_004955527 1,805,854 1,823,623 RGD:9068941
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link NW_004955493 6,696,520 6,707,849 RGD:9068941
regulation of autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acer2 alkaline ceramidase 2 JBrowse link NW_004955434 21,786,857 21,810,648 RGD:9068941
G Atm ATM serine/threonine kinase JBrowse link NW_004955412 10,422,753 10,531,406 RGD:9068941
G Bcl2 BCL2 apoptosis regulator JBrowse link NW_004955402 46,911,125 47,084,214 RGD:9068941
G Bok BCL2 family apoptosis regulator BOK JBrowse link NW_004955542 224,471 232,401 RGD:9068941
G C9orf72 C9orf72-SMCR8 complex subunit JBrowse link NW_004955472 7,299,092 7,337,591 RGD:9068941
G Chmp4b charged multivesicular body protein 4B JBrowse link NW_004955422 27,482,239 27,526,798 RGD:9068941
G Cisd2 CDGSH iron sulfur domain 2 JBrowse link NW_004955496 5,656,686 5,672,888 RGD:9068941
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link NW_004955493 6,696,520 6,707,849 RGD:9068941
G Ddit3 DNA damage inducible transcript 3 JBrowse link NW_004955458 5,232,979 5,238,513 RGD:9068941
G Depp1 DEPP1 autophagy regulator JBrowse link NW_004955546 2,291,829 2,293,375 RGD:9068941
G Dram1 DNA damage regulated autophagy modulator 1 JBrowse link NW_004955405 37,153,847 37,170,007 RGD:9068941
G Dram2 DNA damage regulated autophagy modulator 2 JBrowse link NW_004955435 14,664,292 14,704,198 RGD:9068941
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit JBrowse link NW_004955442 4,833,453 4,861,201 RGD:9068941
G Fbxl2 F-box and leucine rich repeat protein 2 JBrowse link NW_004955421 512,197 617,524 RGD:9068941
G Gpr137b G protein-coupled receptor 137B JBrowse link NW_004955492 3,916,536 3,952,330 RGD:9068941
G Ifi16 interferon gamma inducible protein 16 JBrowse link NW_004955468 10,828,726 10,845,853 RGD:9068941
G Keap1 kelch like ECH associated protein 1 JBrowse link NW_004955495 1,704,695 1,711,339 RGD:9068941
G Lamp3 lysosomal associated membrane protein 3 JBrowse link NW_004955420 24,155,793 24,185,366 RGD:9068941
G Lmx1b LIM homeobox transcription factor 1 beta JBrowse link NW_004955419 1,782,566 1,857,375 RGD:9068941
G Lrrk2 leucine rich repeat kinase 2 JBrowse link NW_004955505 84,324 216,923 RGD:9068941
G Mapk15 mitogen-activated protein kinase 15 JBrowse link NW_004955454 2,413,393 2,420,703 RGD:9068941
G Mapt microtubule associated protein tau JBrowse link NW_004955478 10,222,439 10,271,439 RGD:9068941
G Mfsd8 major facilitator superfamily domain containing 8 JBrowse link NW_004955428 13,519,285 13,548,007 RGD:9068941
G Mtor mechanistic target of rapamycin kinase JBrowse link NW_004955486 2,487,642 2,599,694 RGD:9068941
G Nlrp6 NLR family pyrin domain containing 6 JBrowse link NW_004955476 11,755,489 11,762,781 RGD:9068941
G Nupr1 nuclear protein 1, transcriptional regulator JBrowse link NW_004955493 6,746,380 6,747,763 RGD:9068941
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 JBrowse link NW_004955524 3,234,111 3,241,445 RGD:9068941
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha JBrowse link NW_004955429 6,231,135 6,399,672 RGD:9068941
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta JBrowse link NW_004955451 13,842,814 13,856,301 RGD:9068941
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma JBrowse link NW_004955458 5,315,083 5,327,617 RGD:9068941
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004955439 18,664,230 19,953,358 RGD:9068941
G Rab39b RAB39B, member RAS oncogene family JBrowse link NW_004955594 424,642 431,009 RGD:9068941
G Rab8a RAB8A, member RAS oncogene family JBrowse link NW_004955524 1,403,811 1,416,005 RGD:9068941
G Rmc1 regulator of MON1-CCZ1 JBrowse link NW_004955402 11,676,883 11,699,715 RGD:9068941
G Smcr8 SMCR8-C9orf72 complex subunit JBrowse link NW_004955478 11,002,174 11,015,123 RGD:9068941
G Soga1 suppressor of glucose, autophagy associated 1 JBrowse link NW_004955422 24,803,116 24,865,427 RGD:9068941
G Tpcn2 two pore segment channel 2 JBrowse link NW_004955422 16,899,730 16,923,962 RGD:9068941
G Trib3 tribbles pseudokinase 3 JBrowse link NW_004955597 259,209 265,896 RGD:9068941
G Usp10 ubiquitin specific peptidase 10 JBrowse link NW_004955541 242,182 296,018 RGD:9068941
G Usp13 ubiquitin specific peptidase 13 JBrowse link NW_004955420 8,835,858 8,919,837 RGD:9068941
G Usp33 ubiquitin specific peptidase 33 JBrowse link NW_004955423 15,424,349 15,469,344 RGD:9068941
G Vps29 VPS29 retromer complex component JBrowse link NW_004955482 7,397,123 7,405,593 RGD:9068941
G Wdr24 WD repeat domain 24 JBrowse link NW_004955442 16,513,074 16,519,296 RGD:9068941
G Wdr41 WD repeat domain 41 JBrowse link NW_004955425 23,366,130 23,510,897 RGD:9068941
G Xbp1 X-box binding protein 1 JBrowse link NW_004955455 3,037,885 3,041,827 RGD:9068941
G Xpa XPA, DNA damage recognition and repair factor JBrowse link NW_004955419 27,751,042 27,774,917 RGD:9068941
G Zmpste24 zinc metallopeptidase STE24 JBrowse link NW_004955537 82,724 134,609 RGD:9068941
regulation of autophagy of mitochondrion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bnip3l BCL2 interacting protein 3 like JBrowse link NW_004955403 49,122,408 49,144,162 RGD:9068941
G Csnk2a2 casein kinase 2 alpha 2 JBrowse link NW_004955433 15,677,788 15,718,894 RGD:9068941
G Cttn cortactin JBrowse link NW_004955422 15,838,036 15,874,067 RGD:9068941
G Dnm1l dynamin 1 like JBrowse link NW_004955505 3,025,742 3,081,491 RGD:9068941
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link NW_004955471 6,852,459 7,026,590 RGD:9068941
G Fzd5 frizzled class receptor 5 JBrowse link NW_004955457 7,282,403 7,288,918 RGD:9068941
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link NW_004955555 668,641 676,351 RGD:9068941
G Parl presenilin associated rhomboid like JBrowse link NW_004955420 23,549,125 23,581,782 RGD:9068941
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link NW_004955577 171,425 183,669 RGD:9068941
G Srebf2 sterol regulatory element binding transcription factor 2 JBrowse link NW_004955413 27,271,717 27,326,655 RGD:9068941
G Usp36 ubiquitin specific peptidase 36 JBrowse link NW_004955506 3,824,598 3,861,919 RGD:9068941
G Vdac1 voltage dependent anion channel 1 JBrowse link NW_004955408 5,260,444 5,275,972 RGD:9068941
regulation of chaperone-mediated autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gfap glial fibrillary acidic protein JBrowse link NW_004955451 17,695,835 17,703,894 RGD:9068941
regulation of macroautophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp13a2 ATPase cation transporting 13A2 JBrowse link NW_004955527 1,805,854 1,823,623 RGD:9068941
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 JBrowse link NW_004955451 16,396,287 16,442,596 RGD:9068941
G Hdac6 histone deacetylase 6 JBrowse link NW_004955543 348,314 378,391 RGD:9068941
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 JBrowse link NW_004955464 2,996,608 3,062,197 RGD:9068941
G Ubqln2 ubiquilin 2 JBrowse link NW_004955475 3,260,209 3,263,586 RGD:9068941
reticulophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddrgk1 DDRGK domain containing 1 JBrowse link NW_004955415 14,085,404 14,098,220 RGD:9068941
G Retreg1 reticulophagy regulator 1 JBrowse link NW_004955426 5,574,207 5,688,236 RGD:9068941
G Sting1 stimulator of interferon response cGAMP interactor 1 JBrowse link NW_004955418 1,091,022 1,097,064 RGD:9068941
G Tex264 testis expressed 264, ER-phagy receptor JBrowse link NW_004955532 3,278,214 3,306,045 RGD:9068941
G Uba5 ubiquitin like modifier activating enzyme 5 JBrowse link NW_004955501 5,841,516 5,864,304 RGD:9068941
G Ufc1 ubiquitin-fold modifier conjugating enzyme 1 JBrowse link NW_004955468 12,919,031 12,922,740 RGD:9068941
G Ufl1 UFM1 specific ligase 1 JBrowse link NW_004955411 22,548,139 22,577,287 RGD:9068941
G Ufm1 ubiquitin fold modifier 1 JBrowse link NW_004955431 7,860,706 7,872,972 RGD:9068941
selective autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sqstm1 sequestosome 1 JBrowse link NW_004955408 757,426 764,989 RGD:9068941
substrate localization to autophagosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 JBrowse link NW_004955460 14,774,545 14,860,783 RGD:9068941
suppression by virus of host autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atg7 autophagy related 7 JBrowse link NW_004955429 14,076,976 14,301,034 RGD:9068941
xenophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atg16l1 autophagy related 16 like 1 JBrowse link NW_004955453 2,884,497 2,917,581 RGD:9068941
G Calcoco2 calcium binding and coiled-coil domain 2 JBrowse link NW_004955451 12,443,262 12,469,608 RGD:9068941
G Lgals8 galectin 8 JBrowse link NW_004955492 3,673,233 3,693,777 RGD:9068941
G Wipi2 WD repeat domain, phosphoinositide interacting 2 JBrowse link NW_004955460 10,090,343 10,132,724 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11825
    cellular process 11033
      process utilizing autophagic mechanism 345
        autophagy + 345
        cytoplasm to vacuole transport by the Cvt pathway + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.