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ONTOLOGY REPORT - ANNOTATIONS


Term:meiosis I cell cycle process
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Accession:GO:0061982 term browser browse the term
Definition:A process that contributes to the first meiotic division. The first meiotic division is the reductive division resulting in the separation of homologous chromosome pairs.
Synonyms:exact_synonym: first meiotic cell division


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attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cenpc centromere protein C JBrowse link 14 23,611,909 23,670,314 RGD:13792537
chiasma assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 10 73,507,009 73,632,742 RGD:1624291
RGD:1600115
G Ccnb1ip1 cyclin B1 interacting protein 1 JBrowse link 15 27,720,220 27,736,528 RGD:1624291
RGD:1600115
G Rnf212 ring finger protein 212 JBrowse link 14 1,959,148 1,998,077 RGD:1624291
RGD:1600115
G Sycp1 synaptonemal complex protein 1 JBrowse link 2 205,274,766 205,426,869 RGD:1624291
RGD:1600115
G Sycp3 synaptonemal complex protein 3 JBrowse link 7 29,029,887 29,044,344 RGD:1624291
G Tex11 testis expressed 11 JBrowse link X 70,670,212 70,946,621 RGD:1624291
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 10 37,439,947 37,454,867 RGD:1624291
chromosome localization to nuclear envelope involved in homologous chromosome segregation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc155 coiled-coil domain containing 155 JBrowse link 1 101,180,497 101,203,048 RGD:1624291
RGD:1600115
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 10 73,507,009 73,632,742 RGD:1624291
RGD:13792537
G Mcmdc2 minichromosome maintenance domain containing 2 JBrowse link 5 8,973,861 9,039,616 RGD:1624291
RGD:1600115
G Morc2b microrchidia 2B JBrowse link 7 15,479,754 15,483,834 RGD:1600115
G Prdm9 PR/SET domain 9 JBrowse link 1 57,533,602 57,555,155 RGD:1600115
RGD:1624291
G Spo11 SPO11, initiator of meiotic double stranded breaks JBrowse link 3 170,991,573 171,008,226 RGD:1624291
RGD:1600115
female meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdc25b cell division cycle 25B JBrowse link 3 123,731,539 123,741,696 RGD:1624291
RGD:1600115
G Meiob meiosis specific with OB-fold JBrowse link 10 14,174,645 14,206,026 RGD:1600115
RGD:1624291
G Meioc meiosis specific with coiled-coil domain JBrowse link 10 90,622,954 90,641,883 RGD:1624291
RGD:13792537
G Mlh3 mutL homolog 3 JBrowse link 6 109,059,386 109,095,876 RGD:1624291
RGD:1600115
G Trip13 thyroid hormone receptor interactor 13 JBrowse link 1 31,967,980 32,012,923 RGD:1624291
RGD:1600115
G Ubb ubiquitin B JBrowse link 10 48,880,231 48,881,896 RGD:1624291
homologous chromosome movement towards spindle pole in meiosis I anaphase term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fmn2 formin 2 JBrowse link 13 92,569,256 92,887,302 RGD:1624291
homologous chromosome orientation involved in meiotic metaphase I plate congression term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:1599505
homologous chromosome segregation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Espl1 extra spindle pole bodies like 1, separase JBrowse link 7 143,896,890 143,923,868 RGD:1624291
RGD:1600115
G Meikin meiotic kinetochore factor JBrowse link 10 39,726,373 39,776,458 RGD:1624291
RGD:13792537
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:1624291
G Plk1 polo-like kinase 1 JBrowse link 1 192,115,990 192,125,969 RGD:1624291
RGD:1600115
G Pttg1 PTTG1 regulator of sister chromatid separation, securin JBrowse link 10 29,014,332 29,026,088 RGD:1624291
RGD:13792537
late meiotic recombination nodule assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mcmdc2 minichromosome maintenance domain containing 2 JBrowse link 5 8,973,861 9,039,616 RGD:1624291
RGD:1600115
lateral element assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sycp1 synaptonemal complex protein 1 JBrowse link 2 205,274,766 205,426,869 RGD:1624291
RGD:1600115
G Sycp3 synaptonemal complex protein 3 JBrowse link 7 29,029,887 29,044,344 RGD:1624291
male meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:1624291
RGD:1600115
G Brdt bromodomain testis associated JBrowse link 14 3,437,876 3,462,613 RGD:1624291
RGD:1600115
G Btbd18 BTB domain containing 18 JBrowse link 3 72,060,811 72,070,566 RGD:1624291
RGD:1600115
G Ddx4 DEAD-box helicase 4 JBrowse link 2 44,447,610 44,504,263 RGD:1600115
RGD:1624291
G Dmc1 DNA meiotic recombinase 1 JBrowse link 7 120,796,217 120,840,524 RGD:1624291
RGD:1600115
G Dmrtc2 DMRT-like family C2 JBrowse link 1 81,734,256 81,741,419 RGD:1624291
G Dnmt3l DNA methyltransferase 3 like JBrowse link 20 11,344,513 11,359,090 RGD:1624291
RGD:1600115
G Hspa2 heat shock protein family A (Hsp70) member 2 JBrowse link 6 99,433,575 99,436,288 RGD:1624291
RGD:1600115
G Ing2 inhibitor of growth family, member 2 JBrowse link 16 47,714,756 47,725,836 RGD:1624291
RGD:1600115
G Mei1 meiotic double-stranded break formation protein 1 JBrowse link 7 123,308,041 123,361,391 RGD:1624291
G Meiob meiosis specific with OB-fold JBrowse link 10 14,174,645 14,206,026 RGD:1624291
RGD:1600115
G Meioc meiosis specific with coiled-coil domain JBrowse link 10 90,622,954 90,641,883 RGD:1624291
RGD:13792537
G Mov10l1 Mov10 like RISC complex RNA helicase 1 JBrowse link 7 129,973,391 130,039,306 RGD:1624291
G Mybl1 MYB proto-oncogene like 1 JBrowse link 5 9,279,756 9,315,112 RGD:1624291
G Rad51c RAD51 paralog C JBrowse link 10 74,697,713 74,724,004 RGD:1624291
G Rec8 REC8 meiotic recombination protein JBrowse link 15 34,296,922 34,304,387 RGD:1624291
RGD:1600115
G Siah1 siah E3 ubiquitin protein ligase 1 JBrowse link 19 21,372,163 21,395,773 RGD:1624291
G Slc2a8 solute carrier family 2 member 8 JBrowse link 3 12,020,227 12,029,920 RGD:70577
G Spo11 SPO11, initiator of meiotic double stranded breaks JBrowse link 3 170,991,573 171,008,226 RGD:1624291
RGD:1600115
G Tdrd9 tudor domain containing 9 JBrowse link 6 136,536,636 136,650,481 RGD:1624291
RGD:1600115
G Trip13 thyroid hormone receptor interactor 13 JBrowse link 1 31,967,980 32,012,923 RGD:1624291
RGD:1600115
G Ubb ubiquitin B JBrowse link 10 48,880,231 48,881,896 RGD:1624291
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 JBrowse link 9 16,003,058 16,080,152 RGD:1624291
RGD:1600115
meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cks2 CDC28 protein kinase regulatory subunit 2 JBrowse link 17 13,587,664 13,593,423 RGD:1624291
G Espl1 extra spindle pole bodies like 1, separase JBrowse link 7 143,896,890 143,923,868 RGD:1624291
G M1ap meiosis 1 associated protein JBrowse link 4 113,772,716 113,864,171 RGD:1600115
G Msh5 mutS homolog 5 JBrowse link 20 5,020,690 5,037,125 RGD:1624291
G Psmd13 proteasome 26S subunit, non-ATPase 13 JBrowse link 1 213,636,159 213,648,499 RGD:1624291
RGD:1600115
G Rad51 RAD51 recombinase JBrowse link 3 110,918,240 110,942,920 RGD:9831173
meiotic attachment of telomere to nuclear envelope term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Majin membrane anchored junction protein JBrowse link 1 221,540,551 221,594,124 RGD:1624291
RGD:13792537
RGD:1600115
G Rad21l1 RAD21 cohesin complex component like 1 JBrowse link 3 147,163,335 147,191,008 RGD:1624291
RGD:1600115
G Sun1 Sad1 and UNC84 domain containing 1 JBrowse link 12 17,488,482 17,533,334 RGD:1624291
RGD:1600115
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link 19 682,013 736,358 RGD:1624291
RGD:1600115
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link 3 114,129,387 114,147,943 RGD:1624291
RGD:1600115
meiotic DNA double-strand break formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC119332.1 RGD:1600115
G Ccdc36 coiled-coil domain containing 36 JBrowse link 8 117,182,484 117,215,390 RGD:1624291
RGD:1600115
G Hormad1 HORMA domain containing 1 JBrowse link 2 197,681,820 197,720,197 RGD:1600115
RGD:1624291
G Mei4 meiotic double-stranded break formation protein 4 JBrowse link 8 89,369,417 89,556,942 RGD:1624291
RGD:13792537
G Mre11 MRE11 homolog, double strand break repair nuclease JBrowse link 8 13,304,355 13,350,329 RGD:13792537
G RGD1563323 similar to hypothetical protein FLJ22531 JBrowse link 1 219,864,108 219,952,143 RGD:1624291
G Spo11 SPO11, initiator of meiotic double stranded breaks JBrowse link 3 170,991,573 171,008,226 RGD:13792537
meiotic DNA double-strand break formation involved in reciprocal meiotic recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd31 ankyrin repeat domain 31 JBrowse link 2 27,571,129 27,743,668 RGD:1624291
meiotic DNA double-strand break processing involved in reciprocal meiotic recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 10 73,507,009 73,632,742 RGD:1624291
RGD:1600115
G Six6os1 Six6 opposite strand transcript 1 JBrowse link 6 95,761,718 95,797,314 RGD:1624291
RGD:13792537
meiotic DNA repair synthesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spata22 spermatogenesis associated 22 JBrowse link 10 59,893,064 59,910,769 RGD:1624291
RGD:1600115
G Sycp1 synaptonemal complex protein 1 JBrowse link 2 205,274,766 205,426,869 RGD:1624291
RGD:1600115
G Sycp3 synaptonemal complex protein 3 JBrowse link 7 29,029,887 29,044,344 RGD:1624291
G Tex12 testis expressed 12 JBrowse link 8 54,991,501 54,999,454 RGD:1624291
RGD:1600115
meiotic gene conversion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prdm9 PR/SET domain 9 JBrowse link 1 57,533,602 57,555,155 RGD:1624291
G Rnf212 ring finger protein 212 JBrowse link 14 1,959,148 1,998,077 RGD:1624291
RGD:1600115
G Tex11 testis expressed 11 JBrowse link X 70,670,212 70,946,621 RGD:1624291
meiotic metaphase I plate congression term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:1624291
RGD:1600115
meiotic mismatch repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 1 80,256,973 80,268,198 RGD:13792537
G Msh3 mutS homolog 3 JBrowse link 2 21,790,048 21,931,791 RGD:13792537
G Msh6 mutS homolog 6 JBrowse link 6 11,644,565 11,662,389 RGD:13792537
meiotic recombination nodule assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mcmdc2 minichromosome maintenance domain containing 2 JBrowse link 5 8,973,861 9,039,616 RGD:1624291
meiotic sister chromatid cohesion involved in meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Meikin meiotic kinetochore factor JBrowse link 10 39,726,373 39,776,458 RGD:1624291
RGD:13792537
G Sgo2 shugoshin 2 JBrowse link 9 64,898,380 64,923,023 RGD:1624291
meiotic telomere clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link 8 58,015,938 58,119,973 RGD:1624291
RGD:1600115
G Cep63 centrosomal protein 63 JBrowse link 8 111,063,988 111,116,014 RGD:1624291
G Majin membrane anchored junction protein JBrowse link 1 221,540,551 221,594,124 RGD:1624291
RGD:1600115
G Mei1 meiotic double-stranded break formation protein 1 JBrowse link 7 123,308,041 123,361,391 RGD:1624291
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:1624291
RGD:1600115
G Spo11 SPO11, initiator of meiotic double stranded breaks JBrowse link 3 170,991,573 171,008,226 RGD:1624291
RGD:1600115
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link 19 682,013 736,358 RGD:1624291
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link 3 114,129,387 114,147,943 RGD:1624291
G Terf1 telomeric repeat binding factor 1 JBrowse link 5 2,853,455 2,882,731 RGD:1624291
RGD:1600115
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 10 37,439,947 37,454,867 RGD:1624291
microtubule cytoskeleton organization involved in homologous chromosome segregation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc155 coiled-coil domain containing 155 JBrowse link 1 101,180,497 101,203,048 RGD:1624291
RGD:1600115
positive regulation of G2/MI transition of meiotic cell cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdc25a cell division cycle 25A JBrowse link 8 117,953,223 117,971,552 RGD:13792537
G Cdc25b cell division cycle 25B JBrowse link 3 123,731,539 123,741,696 RGD:13792537
G Cdc25c cell division cycle 25C JBrowse link 18 27,528,768 27,550,316 RGD:13792537
positive regulation of meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmrt1 doublesex and mab-3 related transcription factor 1 JBrowse link 1 243,477,403 243,582,629 RGD:1624291
RGD:13792537
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 JBrowse link 5 156,343,663 156,564,037 RGD:1624291
G Piwil2 piwi-like RNA-mediated gene silencing 2 JBrowse link 15 52,037,693 52,116,277 RGD:1624291
RGD:1600115
G Prdm9 PR/SET domain 9 JBrowse link 1 57,533,602 57,555,155 RGD:1624291
positive regulation of meiotic DNA double-strand break formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd31 ankyrin repeat domain 31 JBrowse link 2 27,571,129 27,743,668 RGD:1624291
positive regulation of metaphase/anaphase transition of meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mapk15 mitogen-activated protein kinase 15 JBrowse link 7 117,041,287 117,061,799 RGD:1600115
RGD:1624291
positive regulation of reciprocal meiotic recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prdm9 PR/SET domain 9 JBrowse link 1 57,533,602 57,555,155 RGD:1624291
RGD:13792537
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 10 37,439,947 37,454,867 RGD:1624291
reciprocal meiotic recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnb1ip1 cyclin B1 interacting protein 1 JBrowse link 15 27,720,220 27,736,528 RGD:1624291
RGD:13792537
G Cep63 centrosomal protein 63 JBrowse link 8 111,063,988 111,116,014 RGD:1624291
G Chtf18 chromosome transmission fidelity factor 18 JBrowse link 10 15,090,762 15,098,825 RGD:1624291
G Cntd1 cyclin N-terminal domain containing 1 JBrowse link 10 89,199,988 89,210,369 RGD:1624291
RGD:1600115
G Dmc1 DNA meiotic recombinase 1 JBrowse link 7 120,796,217 120,840,524 RGD:13792537
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:1624291
G Mnd1 meiotic nuclear divisions 1 JBrowse link 2 183,073,029 183,140,768 RGD:13792537
G Msh3 mutS homolog 3 JBrowse link 2 21,790,048 21,931,791 RGD:13792537
G Msh4 mutS homolog 4 JBrowse link 2 260,057,708 260,108,897 RGD:13792537
G Msh5 mutS homolog 5 JBrowse link 20 5,020,690 5,037,125 RGD:13792537
G Psmc3ip PSMC3 interacting protein JBrowse link 10 89,002,109 89,006,075 RGD:1600115
G Rad50 RAD50 double strand break repair protein JBrowse link 10 39,002,130 39,054,042 RGD:68816
G Rad51 RAD51 recombinase JBrowse link 3 110,918,240 110,942,920 RGD:13792537
G Rad51c RAD51 paralog C JBrowse link 10 74,697,713 74,724,004 RGD:1624291
RGD:13792537
G Rad54b RAD54 homolog B JBrowse link 5 25,140,531 25,214,469 RGD:13792537
G RGD1563323 similar to hypothetical protein FLJ22531 JBrowse link 1 219,864,108 219,952,143 RGD:1624291
G Rnf212 ring finger protein 212 JBrowse link 14 1,959,148 1,998,077 RGD:1624291
G Spo11 SPO11, initiator of meiotic double stranded breaks JBrowse link 3 170,991,573 171,008,226 RGD:1624291
RGD:13792537
G Syce3 synaptonemal complex central element protein 3 JBrowse link 7 130,360,511 130,386,673 RGD:1624291
RGD:13792537
G Sycp1 synaptonemal complex protein 1 JBrowse link 2 205,274,766 205,426,869 RGD:1624291
RGD:1600115
G Tex11 testis expressed 11 JBrowse link X 70,670,212 70,946,621 RGD:1624291
RGD:13792537
G Tex19.1 testis expressed 19.1 JBrowse link 10 110,346,453 110,348,655 RGD:1600115
G Trip13 thyroid hormone receptor interactor 13 JBrowse link 1 31,967,980 32,012,923 RGD:1600115
RGD:13792537
RGD:1624291
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 JBrowse link 9 16,003,058 16,080,152 RGD:1624291
RGD:1600115
regulation of homologous chromosome segregation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc36 coiled-coil domain containing 36 JBrowse link 8 117,182,484 117,215,390 RGD:1624291
G Hormad1 HORMA domain containing 1 JBrowse link 2 197,681,820 197,720,197 RGD:1600115
RGD:1624291
regulation of meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wee2 WEE2 oocyte meiosis inhibiting kinase JBrowse link 4 68,604,770 68,631,341 RGD:1624291
RGD:13792537
resolution of meiotic recombination intermediates term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07030926.1 RGD:13792537
G AABR07048387.1 RGD:1600115
G AC117889.1 RGD:13792537
G Cenps centromere protein S JBrowse link 5 165,946,106 165,955,723 RGD:1624291
G Cenpx centromere protein X JBrowse link 10 109,890,904 109,893,804 RGD:1624291
G Eme1 essential meiotic structure-specific endonuclease 1 JBrowse link 10 82,366,820 82,375,510 RGD:13792537
G Eme2 essential meiotic structure-specific endonuclease subunit 2 JBrowse link 10 14,253,552 14,257,017 RGD:13792537
G Fancm FA complementation group M JBrowse link 6 86,823,195 86,877,067 RGD:1624291
RGD:1600115
G Hfm1 helicase for meiosis 1 JBrowse link 14 3,879,172 3,961,139 RGD:1624291
RGD:13792537
G Meiob meiosis specific with OB-fold JBrowse link 10 14,174,645 14,206,026 RGD:1600115
RGD:13792537
RGD:1624291
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:1600115
RGD:1624291
G Msh4 mutS homolog 4 JBrowse link 2 260,057,708 260,108,897 RGD:13792537
G Mus81 MUS81 structure-specific endonuclease subunit JBrowse link 1 220,862,474 220,867,973 RGD:13792537
G Rmi1 RecQ mediated genome instability 1 JBrowse link 17 6,658,285 6,665,618 RGD:13792537
G Shoc1 shortage in chiasmata 1 JBrowse link 5 76,190,486 76,298,723 RGD:1624291
G Slx4 SLX4 structure-specific endonuclease subunit JBrowse link 10 11,787,756 11,808,326 RGD:13792537
G Tex11 testis expressed 11 JBrowse link X 70,670,212 70,946,621 RGD:1624291
G Top2a DNA topoisomerase II alpha JBrowse link 10 86,901,467 86,930,947 RGD:13792537
spindle assembly involved in female meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aurka aurora kinase A JBrowse link 3 170,364,177 170,380,278 RGD:1624291
RGD:1600115
G Fbxo5 F-box protein 5 JBrowse link 1 42,461,277 42,467,646 RGD:1624291
RGD:1600115
synapsis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd31 ankyrin repeat domain 31 JBrowse link 2 27,571,129 27,743,668 RGD:1624291
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 10 73,507,009 73,632,742 RGD:1624291
G Ccdc155 coiled-coil domain containing 155 JBrowse link 1 101,180,497 101,203,048 RGD:1624291
RGD:1600115
G Ccdc36 coiled-coil domain containing 36 JBrowse link 8 117,182,484 117,215,390 RGD:1624291
G Ccne1 cyclin E1 JBrowse link 1 94,485,830 94,495,112 RGD:1624291
RGD:1600115
G Ccne2 cyclin E2 JBrowse link 5 24,434,077 24,446,406 RGD:1624291
RGD:1600115
G Dmc1 DNA meiotic recombinase 1 JBrowse link 7 120,796,217 120,840,524 RGD:1624291
RGD:1600115
G Fancd2 FA complementation group D2 JBrowse link 4 145,489,869 145,551,479 RGD:1624291
RGD:1600115
G Hormad1 HORMA domain containing 1 JBrowse link 2 197,681,820 197,720,197 RGD:1624291
G Mael maelstrom spermatogenic transposon silencer JBrowse link 13 84,412,569 84,452,140 RGD:1624291
RGD:1600115
G Majin membrane anchored junction protein JBrowse link 1 221,540,551 221,594,124 RGD:1624291
RGD:13792537
RGD:1600115
G Mei4 meiotic double-stranded break formation protein 4 JBrowse link 8 89,369,417 89,556,942 RGD:1624291
RGD:13792537
G Meiob meiosis specific with OB-fold JBrowse link 10 14,174,645 14,206,026 RGD:1600115
RGD:1624291
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:1624291
RGD:1600115
G Morc2b microrchidia 2B JBrowse link 7 15,479,754 15,483,834 RGD:1600115
G Mre11 MRE11 homolog, double strand break repair nuclease JBrowse link 8 13,304,355 13,350,329 RGD:1624291
RGD:1600115
G Msh4 mutS homolog 4 JBrowse link 2 260,057,708 260,108,897 RGD:1624291
RGD:1600115
G Msh5 mutS homolog 5 JBrowse link 20 5,020,690 5,037,125 RGD:1624291
G Ndc1 NDC1 transmembrane nucleoporin JBrowse link 5 126,976,636 127,022,941 RGD:1624291
RGD:1600115
G Prdm9 PR/SET domain 9 JBrowse link 1 57,533,602 57,555,155 RGD:1600115
RGD:1624291
G Rad21l1 RAD21 cohesin complex component like 1 JBrowse link 3 147,163,335 147,191,008 RGD:1624291
G Rec8 REC8 meiotic recombination protein JBrowse link 15 34,296,922 34,304,387 RGD:1624291
G Rnf212 ring finger protein 212 JBrowse link 14 1,959,148 1,998,077 RGD:13792537
G Six6os1 Six6 opposite strand transcript 1 JBrowse link 6 95,761,718 95,797,314 RGD:1624291
RGD:13792537
G Spata22 spermatogenesis associated 22 JBrowse link 10 59,893,064 59,910,769 RGD:1624291
RGD:1600115
G Spo11 SPO11, initiator of meiotic double stranded breaks JBrowse link 3 170,991,573 171,008,226 RGD:1624291
G Stag3 stromal antigen 3 JBrowse link 12 19,599,741 19,630,775 RGD:1624291
RGD:1600115
G Sun1 Sad1 and UNC84 domain containing 1 JBrowse link 12 17,488,482 17,533,334 RGD:1624291
RGD:1600115
G Sycp1 synaptonemal complex protein 1 JBrowse link 2 205,274,766 205,426,869 RGD:1624291
RGD:1600115
G Sycp3 synaptonemal complex protein 3 JBrowse link 7 29,029,887 29,044,344 RGD:1624291
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link 19 682,013 736,358 RGD:1624291
RGD:1600115
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link 3 114,129,387 114,147,943 RGD:1624291
RGD:1600115
G Tex15 testis expressed 15, meiosis and synapsis associated JBrowse link 16 62,313,284 62,373,288 RGD:1624291
RGD:1600115
synaptonemal complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ago4 argonaute RISC component 4 JBrowse link 5 144,501,875 144,557,165 RGD:1624291
G Bag6 BCL2-associated athanogene 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
RGD:1600115
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 1 143,171,457 143,278,485 RGD:1624291
G Ehmt2 euchromatic histone lysine methyltransferase 2 JBrowse link 20 4,576,033 4,592,980 RGD:1624291
RGD:1600115
G Hormad1 HORMA domain containing 1 JBrowse link 2 197,681,820 197,720,197 RGD:1624291
RGD:1600115
G Mcmdc2 minichromosome maintenance domain containing 2 JBrowse link 5 8,973,861 9,039,616 RGD:1624291
RGD:1600115
G Meioc meiosis specific with coiled-coil domain JBrowse link 10 90,622,954 90,641,883 RGD:1624291
RGD:1600115
G Mlh3 mutL homolog 3 JBrowse link 6 109,059,386 109,095,876 RGD:1624291
RGD:1600115
G Rad21l1 RAD21 cohesin complex component like 1 JBrowse link 3 147,163,335 147,191,008 RGD:1624291
RGD:1600115
G Rec8 REC8 meiotic recombination protein JBrowse link 15 34,296,922 34,304,387 RGD:1624291
RGD:1600115
G Spo11 SPO11, initiator of meiotic double stranded breaks JBrowse link 3 170,991,573 171,008,226 RGD:1624291
RGD:1600115
G Syce1 synaptonemal complex central element protein 1 JBrowse link 1 213,523,638 213,534,641 RGD:1600115
G Syce1l synaptonemal complex central element protein 1-like JBrowse link 19 45,946,422 45,956,822 RGD:1600115
G Syce2 synaptonemal complex central element protein 2 JBrowse link 19 25,982,003 26,002,399 RGD:1600115
G Syce3 synaptonemal complex central element protein 3 JBrowse link 7 130,360,511 130,386,673 RGD:1624291
RGD:13792537
G Sycp1 synaptonemal complex protein 1 JBrowse link 2 205,274,766 205,426,869 RGD:1600115
RGD:1624291
G Sycp3 synaptonemal complex protein 3 JBrowse link 7 29,029,887 29,044,344 RGD:1624291
G Syde1 synapse defective Rho GTPase homolog 1 JBrowse link 7 14,037,646 14,043,632 RGD:1624291
G Tex11 testis expressed 11 JBrowse link X 70,670,212 70,946,621 RGD:1624291
RGD:13792537
G Tex12 testis expressed 12 JBrowse link 8 54,991,501 54,999,454 RGD:1624291
RGD:13792537
G Tex15 testis expressed 15, meiosis and synapsis associated JBrowse link 16 62,313,284 62,373,288 RGD:1624291
G Trip13 thyroid hormone receptor interactor 13 JBrowse link 1 31,967,980 32,012,923 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19245
    reproductive process 1708
      meiotic cell cycle process 206
        meiosis I cell cycle process 117
          G2/MI transition of meiotic cell cycle + 3
          chromatin remodeling involved in meiosis I 0
          karyosome formation + 0
          meiosis I + 111
          meiosis I cytokinesis 0
          meiotic DNA double-strand break formation + 8
          meiotic DNA recombinase assembly + 1
          meiotic DNA repair synthesis + 4
          meiotic gene conversion + 3
          meiotic heteroduplex formation 0
          meiotic mismatch repair + 3
          meiotic strand displacement + 0
          meiotic strand invasion + 0
          metaphase/anaphase transition of meiosis I + 1
          resolution of meiotic recombination intermediates 18
Path 2
Term Annotations click to browse term
  biological_process 19245
    cellular process 17125
      cell cycle 1502
        cell cycle process 1171
          meiotic cell cycle process 206
            meiosis I cell cycle process 117
              G2/MI transition of meiotic cell cycle + 3
              chromatin remodeling involved in meiosis I 0
              karyosome formation + 0
              meiosis I + 111
              meiosis I cytokinesis 0
              meiotic DNA double-strand break formation + 8
              meiotic DNA recombinase assembly + 1
              meiotic DNA repair synthesis + 4
              meiotic gene conversion + 3
              meiotic heteroduplex formation 0
              meiotic mismatch repair + 3
              meiotic strand displacement + 0
              meiotic strand invasion + 0
              metaphase/anaphase transition of meiosis I + 1
              resolution of meiotic recombination intermediates 18
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.