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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of programmed necrotic cell death
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Accession:GO:0062098 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of programmed necrotic cell death.


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regulation of programmed necrotic cell death term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asah1 N-acylsphingosine amidohydrolase 1 ISS
ISO
IEA
GO_REF:0000024
(MGI:6275115|PMID:10974027)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10974027 GO_REF:0000024, GO_REF:0000107, MGI:6275115 NCBI chr16:53,998,604...54,030,006
Ensembl chr16:53,998,560...54,040,836
JBrowse link
negative regulation of necroptotic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 ISO (PMID:22711822) RGD PMID:22711822 NCBI chr 2:187,964,100...188,022,847
Ensembl chr 2:187,977,008...188,021,377
JBrowse link
G Birc2 baculoviral IAP repeat-containing 2 IBA
ISO
PMID:21873635
MGI:104798 (MGI:5315337|PMID:21052097)
RGD PMID:21052097, PMID:21873635 MGI:5315337, RGD:13792537 NCBI chr 8:6,014,014...6,036,668
Ensembl chr 8:6,013,207...6,034,142
JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 IBA
ISO
PMID:21873635
(MGI:5315337|PMID:21052097)
RGD PMID:21052097, PMID:21873635 MGI:5315337, RGD:13792537 NCBI chr 8:6,048,590...6,076,828
Ensembl chr 8:6,048,969...6,076,598
JBrowse link
G Bok BCL2 family apoptosis regulator BOK ISO (MGI:5796062|PMID:27098698) RGD PMID:27098698 MGI:5796062 NCBI chr 9:100,829,593...100,840,498
Ensembl chr 9:100,829,552...100,840,504
JBrowse link
G Casp8 caspase 8 ISS
ISO
GO_REF:0000024
MGI:104798|MGI:1336166|MGI:1921506|MGI:2154952 (MGI:4947443|PMID:21368763), (MGI:5294742|PMID:21402742), (MGI:5306844|PMID:22037414), (MGI:5521568|PMID:22089168), (MGI:6378798|PMID:31511692), (MGI:6401035|PMID:31748744), (MGI:6401044|PMID:31827281)
(PMID:31827280)
UniProt
RGD
PMID:21368763, PMID:21402742, PMID:22037414, PMID:22089168, PMID:31511692, PMID:31748744, PMID:31827280, PMID:31827281 GO_REF:0000024, MGI:4947443, MGI:5294742, MGI:5306844, MGI:5521568, MGI:6378798, MGI:6401035, MGI:6401044 NCBI chr 9:65,614,142...65,662,624
Ensembl chr 9:65,614,142...65,662,106
JBrowse link
G Cav1 caveolin 1 IEA
ISO
GO_REF:0000107
(MGI:5464050|PMID:23049990)
Ensembl
RGD
PMID:23049990 GO_REF:0000107, MGI:5464050 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator ISO MGI:104798|MGI:1261423|MGI:2154952 (MGI:4947443|PMID:21368763), (MGI:5486419|PMID:22675671), (MGI:5521568|PMID:22089168) RGD PMID:21368763, PMID:22089168, PMID:22675671 MGI:4947443, MGI:5486419, MGI:5521568 NCBI chr 9:65,534,608...65,586,395
Ensembl chr 9:65,534,704...65,587,251
JBrowse link
G Fadd Fas associated via death domain ISO MGI:104798|MGI:2154952 (MGI:5486419|PMID:22675671), (MGI:5521568|PMID:22089168) RGD PMID:22089168, PMID:22675671 MGI:5486419, MGI:5521568 NCBI chr 1:217,746,176...217,748,581
Ensembl chr 1:217,742,929...217,748,628
JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 ISO (MGI:5315337|PMID:21052097) RGD PMID:21052097 MGI:5315337 NCBI chr 5:47,183,142...47,244,424
Ensembl chr 5:47,186,558...47,244,416
JBrowse link
G Mutyh mutY DNA glycosylase IEA
ISO
GO_REF:0000107
(MGI:6378777|PMID:28059467)
Ensembl
RGD
PMID:28059467 GO_REF:0000107, MGI:6378777 NCBI chr 5:135,663,328...135,675,348
Ensembl chr 5:135,663,371...135,675,344
JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 ISO (PMID:29883609)
(MGI:6163945|PMID:29883609)
RGD PMID:29883609 MGI:6163945 NCBI chr14:106,008,086...106,062,566
Ensembl chr14:106,008,086...106,061,641
JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 IEA
ISO
GO_REF:0000107
MGI:104798 (MGI:5521568|PMID:22089168)
Ensembl
RGD
PMID:22089168 GO_REF:0000107, MGI:5521568 NCBI chr 3:147,793,014...147,809,941
Ensembl chr 3:147,793,017...147,809,919
JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 ISO (MGI:5602910|PMID:24813850), (MGI:5602911|PMID:24813849), (MGI:5907398|PMID:27819682), (MGI:5907399|PMID:27819681) RGD PMID:24813849, PMID:24813850, PMID:27819681, PMID:27819682 MGI:5602910, MGI:5602911, MGI:5907398, MGI:5907399 NCBI chr17:31,537,580...31,569,904
Ensembl chr17:31,537,591...31,569,904
JBrowse link
G Rnf31 ring finger protein 31 ISO MGI:104798 (MGI:5521568|PMID:22089168) RGD PMID:22089168 MGI:5521568 NCBI chr15:34,270,037...34,282,385
Ensembl chr15:34,270,648...34,282,495
JBrowse link
G Slc25a4 solute carrier family 25 member 4 ISO
IEA
(PMID:16507998)
GO_REF:0000107
RGD
Ensembl
PMID:16507998 GO_REF:0000107 NCBI chr16:49,266,903...49,270,698
Ensembl chr16:49,266,903...49,270,698
JBrowse link
G Ybx3 Y box binding protein 3 ISO
IEA
(PMID:22711822)
GO_REF:0000107
RGD
Ensembl
PMID:22711822 GO_REF:0000107 NCBI chr 4:165,606,819...165,630,041
Ensembl chr 4:165,606,819...165,630,118
JBrowse link
negative regulation of programmed necrotic cell death term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nupr1 nuclear protein 1, transcriptional regulator ISS
ISO
GO_REF:0000024
(PMID:30451898)
UniProt
RGD
PMID:30451898 GO_REF:0000024 NCBI chr 1:194,767,484...194,769,519
Ensembl chr 1:194,767,474...194,769,524
JBrowse link
positive regulation of necroptotic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gzmb granzyme B IMP RGD PMID:19895873 RGD:2325193 NCBI chr15:35,413,862...35,417,293
Ensembl chr15:35,413,793...35,417,316
JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 IMP
ISO
(PMID:22028622), (PMID:22274400), (PMID:22817896) RGD PMID:22028622, PMID:22274400, PMID:22817896, PMID:22372834 RGD:7777172 NCBI chr17:31,537,580...31,569,904
Ensembl chr17:31,537,591...31,569,904
JBrowse link
G Ripk3 receptor-interacting serine-threonine kinase 3 ISO
ISS
(PMID:22265414), (PMID:22817896)
(MGI:5315337|PMID:21052097), (MGI:5516181|PMID:22265414), (MGI:5602910|PMID:24813850), (MGI:5602911|PMID:24813849), (MGI:6434626|PMID:32296175), (MGI:6436371|PMID:22423968), (MGI:6436412|PMID:32200799), (MGI:6436434|PMID:27321907)
GO_REF:0000024
RGD
UniProt
PMID:21052097, PMID:22265414, PMID:22423968, PMID:22817896, PMID:24813849, PMID:24813850, PMID:27321907, PMID:32200799, PMID:32296175 GO_REF:0000024, MGI:5315337, MGI:5516181, MGI:5602910, MGI:5602911, MGI:6434626, MGI:6436371, MGI:6436412, MGI:6436434 NCBI chr15:34,470,796...34,479,741
Ensembl chr15:34,470,796...34,479,741
JBrowse link
G Zbp1 Z-DNA binding protein 1 ISO
ISS
(PMID:32200799)
(MGI:5907398|PMID:27819682), (MGI:5907399|PMID:27819681), (MGI:6095612|PMID:29073079), (MGI:6434626|PMID:32296175), (MGI:6436371|PMID:22423968), (MGI:6436393|PMID:30050136), (MGI:6436412|PMID:32200799), (MGI:6436445|PMID:27746097), (MGI:6442612|PMID:27917412)
GO_REF:0000024
RGD
UniProt
PMID:22423968, PMID:27746097, PMID:27819681, PMID:27819682, PMID:27917412, PMID:29073079, PMID:30050136, PMID:32200799, PMID:32296175 GO_REF:0000024, MGI:5907398, MGI:5907399, MGI:6095612, MGI:6434626, MGI:6436371, MGI:6436393, MGI:6436412, MGI:6436445, MGI:6442612 NCBI chr 3:171,276,062...171,292,062
Ensembl chr 3:171,276,062...171,286,537
JBrowse link
positive regulation of programmed necrotic cell death term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tp53 tumor protein p53 ISO (MGI:6140989|PMID:27258785) RGD PMID:27258785 MGI:6140989 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
regulation of necroptotic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc2 baculoviral IAP repeat-containing 2 ISO (PMID:21737330) RGD PMID:21737330 NCBI chr 8:6,014,014...6,036,668
Ensembl chr 8:6,013,207...6,034,142
JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 ISO (PMID:21737330) RGD PMID:21737330 NCBI chr 8:6,048,590...6,076,828
Ensembl chr 8:6,048,969...6,076,598
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator ISO (PMID:21737330) RGD PMID:21737330 NCBI chr 9:65,534,608...65,586,395
Ensembl chr 9:65,534,704...65,587,251
JBrowse link
G Cyld CYLD lysine 63 deubiquitinase IEA
ISO
GO_REF:0000107
(MGI:5912943|PMID:28701375)
(PMID:27458237)
Ensembl
RGD
PMID:27458237, PMID:28701375 GO_REF:0000107, MGI:5912943 NCBI chr19:19,264,984...19,323,817
Ensembl chr19:19,265,164...19,315,357
JBrowse link
G Fadd Fas associated via death domain IMP RGD PMID:26038570 RGD:11341801 NCBI chr 1:217,746,176...217,748,581
Ensembl chr 1:217,742,929...217,748,628
JBrowse link
G Spata2 spermatogenesis associated 2 ISS
ISO
IBA
GO_REF:0000024
(MGI:5912943|PMID:28701375)
PMID:21873635
(PMID:27307491), (PMID:27458237), (PMID:27545878)
UniProt
RGD
PMID:27307491, PMID:27458237, PMID:27545878, PMID:28701375, PMID:21873635 GO_REF:0000024, MGI:5912943, RGD:13792537 NCBI chr 3:164,229,211...164,239,483
Ensembl chr 3:164,230,852...164,239,250
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cell death 2144
        regulation of cell death 1762
          regulation of necrotic cell death 39
            regulation of programmed necrotic cell death 24
              negative regulation of programmed necrotic cell death + 17
              positive regulation of programmed necrotic cell death + 5
              regulation of necroptotic process + 21
Path 2
Term Annotations click to browse term
  biological_process 20020
    biological regulation 13769
      regulation of biological process 13071
        regulation of cellular process 12556
          regulation of cell death 1762
            regulation of programmed cell death 1583
              regulation of programmed necrotic cell death 24
                negative regulation of programmed necrotic cell death + 17
                positive regulation of programmed necrotic cell death + 5
                regulation of necroptotic process + 21
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.