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ONTOLOGY REPORT - ANNOTATIONS


Term:intracellular protein transmembrane transport
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Accession:GO:0065002 term browser browse the term
Definition:The directed movement of proteins in a cell, from one side of a membrane to another by means of some agent such as a transporter or pore.
Comment:Note that this term is not intended for use in annotating lateral movement within membranes.
Synonyms:exact_synonym: intracellular membrane translocation of a protein;   intracellular protein membrane transport;   intracellular protein transport across a membrane


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intracellular protein transmembrane transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:1600115
RGD:1624291
G Bcr BCR activator of RhoGEF and GTPase JBrowse link 20 14,421,250 14,546,406 RGD:1624291
RGD:1600115
G C2cd5 C2 calcium-dependent domain containing 5 JBrowse link 4 177,245,868 177,331,910 RGD:1624291
RGD:1600115
G Rtn2 reticulon 2 JBrowse link 1 80,195,594 80,208,449 RGD:1624291
RGD:1600115
posttranslational protein targeting to membrane, translocation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link 3 13,838,304 13,842,763 RGD:1600115
RGD:1624291
G Sec61a1 Sec61 translocon alpha 1 subunit JBrowse link 4 120,453,577 120,467,932 RGD:1600115
RGD:1624291
G Sec61b Sec61 translocon beta subunit JBrowse link 5 63,192,322 63,200,532 RGD:13792537
G Sec62 SEC62 homolog, preprotein translocation factor JBrowse link 2 116,188,736 116,225,510 RGD:13792537
RGD:1624291
G Sec63 SEC63 homolog, protein translocation regulator JBrowse link 20 47,494,270 47,563,222 RGD:1600115
RGD:1624291
protein import into mitochondrial intermembrane space term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 JBrowse link 4 123,108,924 123,118,186 RGD:1600115
RGD:13792537
RGD:1624291
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:13792537
G LOC100361898 coiled-coil-helix-coiled-coil-helix domain containing 4 JBrowse link 1 248,402,889 248,403,604 RGD:1600115
RGD:13792537
protein import into mitochondrial matrix term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 JBrowse link 15 59,990,131 60,056,710 RGD:13792537
G Dnajc19 DnaJ heat shock protein family (Hsp40) member C19 JBrowse link 2 120,503,093 120,531,782 RGD:13792537
G Dnlz DNL-type zinc finger JBrowse link 3 3,796,480 3,798,467 RGD:13792537
G Grpel1 GrpE-like 1, mitochondrial JBrowse link 14 79,458,951 79,464,782 RGD:13792537
G Grpel2 GrpE-like 2, mitochondrial JBrowse link 18 57,037,995 57,050,234 RGD:13792537
G LOC100362432 mitochondrial import inner membrane translocase subunit Tim23-like JBrowse link 3 82,970,785 82,971,887 RGD:13792537
G LOC100910944 reactive oxygen species modulator 1-like JBrowse link 3 152,222,703 152,224,314 RGD:13792537
G LOC100911130 mitochondrial import inner membrane translocase subunit Tim17-B-like JBrowse link X 15,340,557 15,347,682 RGD:13792537
G Magmas-ps1 mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction, pseudogene 1 JBrowse link 10 91,752,860 91,753,380 RGD:13792537
G Pam16 presequence translocase associated motor 16 JBrowse link 10 11,146,359 11,153,936 RGD:1624291
RGD:13792537
G Romo1 reactive oxygen species modulator 1 JBrowse link 3 151,688,213 151,689,813 RGD:13792537
G Timm17a translocase of inner mitochondrial membrane 17A JBrowse link 13 52,124,641 52,136,127 RGD:13792537
G Timm17b translocase of inner mitochondrial membrane 17b JBrowse link X 15,441,369 15,448,452 RGD:13792537
G Timm21 translocase of inner mitochondrial membrane 21 JBrowse link 18 81,803,165 81,807,627 RGD:1624291
RGD:13792537
RGD:1600115
G Timm23 translocase of inner mitochondrial membrane 23 JBrowse link 16 8,324,038 8,350,067 RGD:13792537
G Timm44 translocase of inner mitochondrial membrane 44 JBrowse link 12 2,517,006 2,533,707 RGD:1600115
RGD:13792537
G Timm50 translocase of inner mitochondrial membrane 50 JBrowse link 1 85,470,810 85,480,813 RGD:13792537
G Tomm20 translocase of outer mitochondrial membrane 20 JBrowse link 19 59,863,421 59,873,411 RGD:13792537
G Tomm40 translocase of outer mitochondrial membrane 40 JBrowse link 1 80,617,749 80,630,253 RGD:1600115
RGD:13792537
G Tomm40l translocase of outer mitochondrial membrane 40 like JBrowse link 13 89,590,076 89,595,287 RGD:13792537
G Tomm7 translocase of outer mitochondrial membrane 7 JBrowse link 4 7,835,949 7,842,790 RGD:1600115
protein import into peroxisome matrix term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC108348326 peroxisome assembly protein 12 RGD:13792537
G Lonp2 lon peptidase 2, peroxisomal JBrowse link 19 21,400,736 21,492,634 RGD:1600115
G Pex1 peroxisomal biogenesis factor 1 JBrowse link 4 27,659,376 27,698,037 RGD:1624291
RGD:13792537
G Pex10 peroxisomal biogenesis factor 10 JBrowse link 5 172,469,978 172,475,144 RGD:1624291
RGD:13792537
G Pex12 peroxisomal biogenesis factor 12 JBrowse link 10 70,512,785 70,516,494 RGD:1624291
RGD:13792537
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:1624291
G Pex16 peroxisomal biogenesis factor 16 JBrowse link 3 81,283,137 81,292,575 RGD:1624291
RGD:1600115
G Pex2 peroxisomal biogenesis factor 2 JBrowse link 2 98,251,756 98,269,185 RGD:1624291
RGD:1600115
G Pex26 peroxisomal biogenesis factor 26 JBrowse link 4 153,747,715 153,760,446 RGD:1624291
RGD:13792537
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
G Pex6 peroxisomal biogenesis factor 6 JBrowse link 9 16,568,743 16,580,900 RGD:13792537
G Pex7 peroxisomal biogenesis factor 7 JBrowse link 1 15,311,768 15,374,702 RGD:1624291
RGD:1600115
protein import into peroxisome matrix, docking term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC103690024 peroxisomal targeting signal 1 receptor-like JBrowse link 4 156,403,016 156,428,237 RGD:13792537
G Pex13 peroxisomal biogenesis factor 13 JBrowse link 14 108,394,299 108,411,994 RGD:1624291
RGD:13792537
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:13792537
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
RGD:13792537
G Pex5l peroxisomal biogenesis factor 5-like JBrowse link 2 119,330,330 119,405,809 RGD:13792537
protein import into peroxisome matrix, substrate release term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:1624291
RGD:1600115
protein import into peroxisome matrix, translocation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:1624291
RGD:1600115
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
G Pex6 peroxisomal biogenesis factor 6 JBrowse link 9 16,568,743 16,580,900 RGD:1624291
RGD:1600115
SRP-dependent cotranslational protein targeting to membrane, translocation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sec61a1 Sec61 translocon alpha 1 subunit JBrowse link 4 120,453,577 120,467,932 RGD:13792537
G Sec61a2 Sec61 translocon alpha 2 subunit JBrowse link 17 76,358,947 76,385,860 RGD:13792537
G Sec61b Sec61 translocon beta subunit JBrowse link 5 63,192,322 63,200,532 RGD:13792537
G Srp54a signal recognition particle 54A JBrowse link 6 75,996,629 76,035,768 RGD:1624291
RGD:13792537
G Tram1 translocation associated membrane protein 1 JBrowse link 5 5,215,196 5,297,337 RGD:1624291
RGD:1600115
G Tram1l1 translocation associated membrane protein 1-like 1 JBrowse link 2 228,544,418 228,546,599 RGD:1600115
G Tram2 translocation associated membrane protein 2 JBrowse link 9 27,117,861 27,192,166 RGD:1600115
G Zfand2b zinc finger AN1-type containing 2B JBrowse link 9 82,370,887 82,373,843 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18179
    localization 6078
      cellular localization 2579
        intracellular transport 1451
          intracellular protein transport 959
            intracellular protein transmembrane transport 54
              SRP-dependent cotranslational protein targeting to membrane, translocation 8
              posttranslational protein targeting to membrane, translocation 5
              protein import into chloroplast stroma + 0
              protein import into chloroplast thylakoid membrane 0
              protein import into mitochondrial intermembrane space 3
              protein import into mitochondrial matrix 21
              protein import into peroxisome matrix + 15
              protein import into peroxisome matrix, translocation 3
Path 2
Term Annotations click to browse term
  biological_process 18179
    localization 6078
      establishment of localization 4667
        transport 4529
          nitrogen compound transport 2188
            amide transport 1869
              peptide transport 1836
                protein transport 1779
                  protein transmembrane transport 65
                    intracellular protein transmembrane transport 54
                      SRP-dependent cotranslational protein targeting to membrane, translocation 8
                      posttranslational protein targeting to membrane, translocation 5
                      protein import into chloroplast stroma + 0
                      protein import into chloroplast thylakoid membrane 0
                      protein import into mitochondrial intermembrane space 3
                      protein import into mitochondrial matrix 21
                      protein import into peroxisome matrix + 15
                      protein import into peroxisome matrix, translocation 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.