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ONTOLOGY REPORT - ANNOTATIONS


Term:protein-lipid complex assembly
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Accession:GO:0065005 term browser browse the term
Definition:The aggregation, arrangement and bonding together of proteins and lipids to form a protein-lipid complex.


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protein-lipid complex assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 ISO (PMID:16159879) BHF-UCL PMID:16159879 NCBI chr11:111,659,186...111,661,790
Ensembl chr11:115,591,788...115,594,382
JBrowse link
chylomicron assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LPCAT3 lysophosphatidylcholine acyltransferase 3 ISO (MGI:MGI:5780634|PMID:26833026) UniProt PMID:26833026 MGI:MGI:5780634 NCBI chr12:7,107,925...7,149,982
Ensembl chr12:7,024,015...7,065,945
JBrowse link
G PLAGL2 PLAG1 like zinc finger 2 ISO (MGI:MGI:3771409|PMID:17983586) MGI PMID:17983586 MGI:MGI:3771409 NCBI chr20:28,481,605...28,496,903
Ensembl chr20:29,610,196...29,625,442
JBrowse link
high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 ISO (PMID:10431236), (PMID:14754908), (PMID:17305370) BHF-UCL PMID:10431236, PMID:14754908, PMID:17305370 NCBI chr 9:75,948,831...76,096,136
Ensembl chr 9:104,076,516...104,224,188
JBrowse link
G ABCA7 ATP binding cassette subfamily A member 7 ISO (PMID:14570867) Alzheimers_University_of_Toronto PMID:14570867 NCBI chr19:62,811...77,897
Ensembl chr19:1,018,095...1,042,104
JBrowse link
G APOA1 apolipoprotein A1 ISO (PMID:190223) BHF-UCL PMID:190223 NCBI chr11:111,673,539...111,675,428
Ensembl chr11:115,606,136...115,608,122
JBrowse link
G APOA2 apolipoprotein A2 ISO (PMID:218942) BHF-UCL PMID:218942 NCBI chr 1:136,634,754...136,636,122 JBrowse link
G APOE apolipoprotein E ISO (PMID:14754908), (PMID:17305370) UniProt PMID:14754908, PMID:17305370 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G APOM apolipoprotein M ISO (MGI:MGI:3575626|PMID:15793583) BHF-UCL PMID:15793583 MGI:MGI:3575626 NCBI chr 6:31,313,543...31,319,374
Ensembl chr 6:32,206,514...32,209,249
JBrowse link
lipid tube assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BIN1 bridging integrator 1 ISO (PMID:19004523) Alzheimers_University_of_Toronto PMID:19004523 NCBI chr2B:33,168,767...33,228,075
Ensembl chr2B:127,716,550...127,775,378
JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 ISO RGD PMID:20484046 RGD:13464358 NCBI chr 9:17,386,298...17,605,722
Ensembl chr 9:18,045,198...18,097,579
JBrowse link
G SNX9 sorting nexin 9 ISO (PMID:17948057) UniProtKB PMID:17948057 NCBI chr 6:155,724,026...155,844,553
Ensembl chr 6:157,824,918...157,903,357
JBrowse link
plasma lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTTP microsomal triglyceride transfer protein ISO (PMID:8876250)
(PMID:16478722), (PMID:23475612), (PMID:26224785)
UniProt PMID:8876250, PMID:16478722, PMID:23475612, PMID:26224785 NCBI chr 4:91,987,756...92,047,127
Ensembl chr 4:102,648,793...102,708,107
JBrowse link
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 ISO (MGI:MGI:5427333|PMID:22179027) UniProt PMID:22179027 MGI:MGI:5427333 NCBI chr 9:75,948,831...76,096,136
Ensembl chr 9:104,076,516...104,224,188
JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 ISO (MGI:MGI:3720271|PMID:17657314), (MGI:MGI:3794353|PMID:16825483) BHF-UCL PMID:16825483, PMID:17657314 MGI:MGI:3720271, MGI:MGI:3794353 NCBI chr19:47,340,077...47,346,737
Ensembl chr19:56,243,124...56,250,024
JBrowse link
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LCAT lecithin-cholesterol acyltransferase ISO (MGI:MGI:3848791|PMID:19065001) UniProtKB PMID:19065001 MGI:MGI:3848791 NCBI chr16:48,278,137...48,285,305
Ensembl chr16:67,668,646...67,673,127
JBrowse link
very-low-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSL3 acyl-CoA synthetase long chain family member 3 ISO (PMID:18003621) UniProtKB PMID:18003621 NCBI chr2B:110,100,210...110,181,277
Ensembl chr2B:228,706,142...228,759,882
JBrowse link
G ARF1 ADP ribosylation factor 1 ISO RGD PMID:15618550 RGD:9684856 NCBI chr 1:203,484,803...203,501,395
Ensembl chr 1:208,695,615...208,712,105
JBrowse link
G DGAT1 diacylglycerol O-acyltransferase 1 ISO (PMID:15308631) BHF-UCL PMID:15308631 NCBI chr 8:141,079,948...141,090,619
Ensembl chr 8:144,064,587...144,080,155
JBrowse link
G FECH ferrochelatase ISO (MGI:MGI:1930023|PMID:11160364) MGI PMID:11160364 MGI:MGI:1930023 NCBI chr18:50,934,520...50,977,132
Ensembl chr18:54,273,527...54,312,378
JBrowse link
G LPCAT3 lysophosphatidylcholine acyltransferase 3 ISO (MGI:MGI:5636535|PMID:25806685) UniProt PMID:25806685 MGI:MGI:5636535 NCBI chr12:7,107,925...7,149,982
Ensembl chr12:7,024,015...7,065,945
JBrowse link
G MFSD2A major facilitator superfamily domain containing 2A ISO (MGI:MGI:5474727|PMID:23209793) ARUK-UCL PMID:23209793 MGI:MGI:5474727 NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438
JBrowse link
G SOAT1 sterol O-acyltransferase 1 ISO (PMID:15308631) BHF-UCL PMID:15308631 NCBI chr 1:154,776,305...154,840,594
Ensembl chr 1:158,464,886...158,524,909
JBrowse link
G SOAT2 sterol O-acyltransferase 2 ISO (PMID:15308631) BHF-UCL PMID:15308631 NCBI chr12:35,632,018...35,653,227
Ensembl chr12:36,413,954...36,434,074
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12564
    cellular process 11665
      cellular component organization or biogenesis 5013
        cellular component organization 4933
          cellular component assembly 2258
            protein-containing complex assembly 1090
              protein-lipid complex assembly 22
                lipid antigen assembly with MHC class Ib protein complex 0
                lipid tube assembly + 3
                plasma lipoprotein particle assembly + 18
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.