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ONTOLOGY REPORT - ANNOTATIONS


Term:protein-lipid complex assembly
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Accession:GO:0065005 term browser browse the term
Definition:The aggregation, arrangement and bonding together of proteins and lipids to form a protein-lipid complex.


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protein-lipid complex assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 ISO (PMID:16159879) BHF-UCL PMID:16159879 NCBI chrNW_004955412:18,158,095...18,160,636
Ensembl chrNW_004955412:18,155,801...18,160,701
JBrowse link
chylomicron assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISO (MGI:MGI:5780634|PMID:26833026) UniProt PMID:26833026 MGI:MGI:5780634 NCBI chrNW_004955413:4,571,028...4,605,097
Ensembl chrNW_004955413:4,571,028...4,605,097
JBrowse link
G Plagl2 PLAG1 like zinc finger 2 ISO (MGI:MGI:3771409|PMID:17983586) MGI PMID:17983586 MGI:MGI:3771409 NCBI chrNW_004955422:28,839,021...28,847,255
Ensembl chrNW_004955422:28,839,020...28,847,255
JBrowse link
high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (PMID:10431236), (PMID:14754908), (PMID:17305370) BHF-UCL PMID:10431236, PMID:14754908, PMID:17305370 NCBI chrNW_004955419:21,553,863...21,681,626
Ensembl chrNW_004955419:21,553,835...21,681,619
JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 ISO (PMID:14570867) Alzheimers_University_of_Toronto PMID:14570867 NCBI chrNW_004955495:6,818,002...6,838,177
Ensembl chrNW_004955495:6,815,562...6,836,772
JBrowse link
G Apoa1 apolipoprotein A1 ISO (PMID:190223) BHF-UCL PMID:190223 NCBI chrNW_004955412:18,170,331...18,172,298
Ensembl chrNW_004955412:18,170,331...18,172,298
JBrowse link
G Apoa2 apolipoprotein A2 ISO (PMID:218942) BHF-UCL PMID:218942 NCBI chrNW_004955468:12,977,956...12,979,282
Ensembl chrNW_004955468:12,977,956...12,979,753
JBrowse link
G Apoe apolipoprotein E ISO (PMID:14754908), (PMID:17305370) UniProt PMID:14754908, PMID:17305370 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888
JBrowse link
G Apom apolipoprotein M ISO (MGI:MGI:3575626|PMID:15793583) BHF-UCL PMID:15793583 MGI:MGI:3575626 NCBI chrNW_004955437:190,609...192,781
Ensembl chrNW_004955437:190,609...197,342
JBrowse link
lipid tube assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin1 bridging integrator 1 ISO (PMID:19004523) Alzheimers_University_of_Toronto PMID:19004523 NCBI chrNW_004955459:3,376,149...3,423,157
Ensembl chrNW_004955459:3,399,611...3,422,621
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 ISO RGD PMID:20484046 RGD:13464358 NCBI chrNW_004955434:20,332,727...20,381,320
Ensembl chrNW_004955434:20,331,779...20,381,376
JBrowse link
G Snx9 sorting nexin 9 ISO (PMID:17948057) UniProtKB PMID:17948057 NCBI chrNW_004955439:4,422,385...4,503,408
Ensembl chrNW_004955439:4,421,297...4,503,393
JBrowse link
plasma lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mttp microsomal triglyceride transfer protein ISO (PMID:8876250)
(PMID:16478722), (PMID:23475612), (PMID:26224785)
UniProt PMID:8876250, PMID:16478722, PMID:23475612, PMID:26224785 NCBI chrNW_004955496:7,963,323...8,022,393
Ensembl chrNW_004955496:7,963,262...8,009,838
JBrowse link
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (MGI:MGI:5427333|PMID:22179027) UniProt PMID:22179027 MGI:MGI:5427333 NCBI chrNW_004955419:21,553,863...21,681,626
Ensembl chrNW_004955419:21,553,835...21,681,619
JBrowse link
G Nr1h2 nuclear receptor subfamily 1 group H member 2 ISO (MGI:MGI:3720271|PMID:17657314), (MGI:MGI:3794353|PMID:16825483) BHF-UCL PMID:16825483, PMID:17657314 MGI:MGI:3720271, MGI:MGI:3794353 NCBI chrNW_004955559:731,630...736,973
Ensembl chrNW_004955559:730,670...737,505
JBrowse link
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lcat lecithin-cholesterol acyltransferase ISO (MGI:MGI:3848791|PMID:19065001) UniProtKB PMID:19065001 MGI:MGI:3848791 NCBI chrNW_004955484:8,772,692...8,776,122
Ensembl chrNW_004955484:8,772,692...8,776,122
JBrowse link
very-low-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl3 acyl-CoA synthetase long chain family member 3 ISO (PMID:18003621) UniProtKB PMID:18003621 NCBI chrNW_004955453:10,916,423...10,963,986
Ensembl chrNW_004955453:10,913,786...10,947,963
JBrowse link
G Arf1 ADP ribosylation factor 1 ISO RGD PMID:15618550 RGD:9684856 NCBI chrNW_004955581:319,942...335,112
Ensembl chrNW_004955581:319,942...335,112
JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 ISO (PMID:15308631) BHF-UCL PMID:15308631 NCBI chrNW_004955454:2,933,904...2,944,675
Ensembl chrNW_004955454:2,934,152...2,944,492
JBrowse link
G Fech ferrochelatase ISO (MGI:MGI:1930023|PMID:11160364) MGI PMID:11160364 MGI:MGI:1930023 NCBI chrNW_004955402:41,902,868...41,938,099
Ensembl chrNW_004955402:41,902,868...41,938,174
JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISO (MGI:MGI:5636535|PMID:25806685) UniProt PMID:25806685 MGI:MGI:5636535 NCBI chrNW_004955413:4,571,028...4,605,097
Ensembl chrNW_004955413:4,571,028...4,605,097
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A ISO (MGI:MGI:5474727|PMID:23209793) ARUK-UCL PMID:23209793 MGI:MGI:5474727 NCBI chrNW_004955452:17,430,850...17,443,830
Ensembl chrNW_004955452:17,430,219...17,443,830
JBrowse link
G Soat1 sterol O-acyltransferase 1 ISO (PMID:15308631) BHF-UCL PMID:15308631 NCBI chrNW_004955406:18,644,351...18,708,666
Ensembl chrNW_004955406:18,655,894...18,706,891
JBrowse link
G Soat2 sterol O-acyltransferase 2 ISO (PMID:15308631) BHF-UCL PMID:15308631 NCBI chrNW_004955458:383,123...394,003
Ensembl chrNW_004955458:382,892...394,749
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11889
    cellular process 11094
      cellular component organization or biogenesis 4868
        cellular component organization 4788
          cellular component assembly 2192
            protein-containing complex assembly 1044
              protein-lipid complex assembly 22
                lipid antigen assembly with MHC class Ib protein complex 0
                lipid tube assembly + 3
                plasma lipoprotein particle assembly + 18
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.