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ONTOLOGY REPORT - ANNOTATIONS


Term:protein-lipid complex assembly
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Accession:GO:0065005 term browser browse the term
Definition:The aggregation, arrangement and bonding together of proteins and lipids to form a protein-lipid complex.


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protein-lipid complex assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 ISO (PMID:16159879) BHF-UCL PMID:16159879 NCBI chrNW_004936542:2,098,683...2,101,127 JBrowse link
chylomicron assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISO (MGI:MGI:5780634|PMID:26833026) UniProt PMID:26833026 MGI:MGI:5780634 NCBI chrNW_004936709:800,197...852,659 JBrowse link
G Plagl2 PLAG1 like zinc finger 2 ISO (MGI:MGI:3771409|PMID:17983586) MGI PMID:17983586 MGI:MGI:3771409 NCBI chrNW_004936485:19,098,000...19,106,164 JBrowse link
high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (PMID:10431236), (PMID:14754908), (PMID:17305370) BHF-UCL PMID:10431236, PMID:14754908, PMID:17305370 NCBI chrNW_004936559:7,177,887...7,312,660 JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 ISO (PMID:14570867) Alzheimers_University_of_Toronto PMID:14570867 NCBI chrNW_004936588:460,308...477,382 JBrowse link
G Apoa1 apolipoprotein A1 ISO (PMID:190223) BHF-UCL PMID:190223 NCBI chrNW_004936542:2,111,055...2,112,626 JBrowse link
G Apoa2 apolipoprotein A2 ISO (PMID:218942) BHF-UCL PMID:218942 NCBI chrNW_004936903:520,420...521,726 JBrowse link
G Apoe apolipoprotein E ISO (PMID:14754908), (PMID:17305370) UniProt PMID:14754908, PMID:17305370 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Apom apolipoprotein M ISO (MGI:MGI:3575626|PMID:15793583) BHF-UCL PMID:15793583 MGI:MGI:3575626 NCBI chrNW_004936727:1,868,751...1,874,347 JBrowse link
lipid tube assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin1 bridging integrator 1 ISO (PMID:19004523) Alzheimers_University_of_Toronto PMID:19004523 NCBI chrNW_004936469:44,128,308...44,185,739 JBrowse link
G Snx9 sorting nexin 9 ISO (PMID:17948057) UniProtKB PMID:17948057 NCBI chrNW_004936489:9,736,255...9,804,841 JBrowse link
plasma lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mttp microsomal triglyceride transfer protein ISO (PMID:8876250)
(PMID:16478722), (PMID:23475612), (PMID:26224785)
UniProt PMID:8876250, PMID:16478722, PMID:23475612, PMID:26224785 NCBI chrNW_004936520:3,337,726...3,417,818 JBrowse link
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (MGI:MGI:5427333|PMID:22179027) UniProt PMID:22179027 MGI:MGI:5427333 NCBI chrNW_004936559:7,177,887...7,312,660 JBrowse link
G Nr1h2 nuclear receptor subfamily 1 group H member 2 ISO (MGI:MGI:3720271|PMID:17657314), (MGI:MGI:3794353|PMID:16825483) BHF-UCL PMID:16825483, PMID:17657314 MGI:MGI:3720271, MGI:MGI:3794353 NCBI chrNW_004936889:223,137...229,968 JBrowse link
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lcat lecithin-cholesterol acyltransferase ISO (MGI:MGI:3848791|PMID:19065001) UniProtKB PMID:19065001 MGI:MGI:3848791 NCBI chrNW_004936475:18,294,013...18,297,433 JBrowse link
very-low-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl3 acyl-CoA synthetase long chain family member 3 ISO (PMID:18003621) UniProtKB PMID:18003621 NCBI chrNW_004936569:4,774,602...4,842,906 JBrowse link
G Arf1 ADP ribosylation factor 1 ISO RGD PMID:15618550 RGD:9684856 NCBI chrNW_004936864:117,510...119,612 JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 ISO (PMID:15308631) BHF-UCL PMID:15308631 NCBI chrNW_004936470:7,916,438...7,926,089 JBrowse link
G Fech ferrochelatase ISO (MGI:MGI:1930023|PMID:11160364) MGI PMID:11160364 MGI:MGI:1930023 NCBI chrNW_004936497:6,755,626...6,788,568 JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 ISO (MGI:MGI:5636535|PMID:25806685) UniProt PMID:25806685 MGI:MGI:5636535 NCBI chrNW_004936709:800,197...852,659 JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A ISO (MGI:MGI:5474727|PMID:23209793) ARUK-UCL PMID:23209793 MGI:MGI:5474727 NCBI chrNW_004936474:21,790,807...21,803,336 JBrowse link
G Soat1 sterol O-acyltransferase 1 ISO (PMID:15308631) BHF-UCL PMID:15308631 NCBI chrNW_004936481:9,614,605...9,669,705 JBrowse link
G Soat2 sterol O-acyltransferase 2 ISO (PMID:15308631) BHF-UCL PMID:15308631 NCBI chrNW_004936512:10,420,847...10,430,813 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12001
    cellular process 11174
      cellular component organization or biogenesis 4921
        cellular component organization 4843
          cellular component assembly 2222
            protein-containing complex assembly 1064
              protein-lipid complex assembly 21
                lipid antigen assembly with MHC class Ib protein complex 0
                lipid tube assembly + 2
                plasma lipoprotein particle assembly + 18
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.