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ONTOLOGY REPORT - ANNOTATIONS


Term:neuron cellular homeostasis
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Accession:GO:0070050 term browser browse the term
Definition:The cellular homeostatic process that preserves a neuron in a stable, differentiated functional and structural state.
Synonyms:exact_synonym: neuron maintenance


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neuron cellular homeostasis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2b charged multivesicular body protein 2B ISO (PMID:16041373), (PMID:16807408) RGD PMID:16041373, PMID:16807408 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198
JBrowse link
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit ISO (PMID:8872460) RGD PMID:8872460 NCBI chr 3:60,445,657...60,460,724
Ensembl chr 3:60,445,666...60,460,724
JBrowse link
G Clcn3 chloride voltage-gated channel 3 ISO MGI:MGI:2183297 (MGI:MGI:2182197|PMID:11182090) RGD PMID:11182090 MGI:MGI:2182197 NCBI chr16:32,448,821...32,520,649
Ensembl chr16:32,449,116...32,519,148
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 IDA PMID:16019082 ARUK-UCL PMID:16019082 RGD:13673766 NCBI chr19:10,644,267...10,654,861
Ensembl chr19:10,644,244...10,653,800
JBrowse link
G Dctn1 dynactin subunit 1 ISO
IEA
(PMID:18305234)
GO_REF:0000107
RGD
Ensembl
PMID:18305234 GO_REF:0000107 NCBI chr 4:114,876,770...114,896,567
Ensembl chr 4:114,876,770...114,896,573
JBrowse link
G Fggy FGGY carbohydrate kinase domain containing ISO (PMID:17671248) RGD PMID:17671248 NCBI chr 5:114,516,860...114,901,571
Ensembl chr 5:114,516,889...114,901,564
JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase IEA
ISO
GO_REF:0000107
(PMID:2967497)
Ensembl
RGD
PMID:2967497 GO_REF:0000107 NCBI chr 6:7,045,145...7,059,227
Ensembl chr 6:7,045,152...7,058,314
JBrowse link
G Map1a microtubule-associated protein 1A ISO (MGI:MGI:5632407|PMID:25788676) RGD PMID:25788676 MGI:MGI:5632407 NCBI chr 3:113,251,918...113,272,193
Ensembl chr 3:113,251,778...113,272,186
JBrowse link
G Mink1 misshapen-like kinase 1 IMP PMID:21048137 CACAO PMID:21048137 RGD:8553980 NCBI chr10:57,185,310...57,238,531
Ensembl chr10:57,185,347...57,238,531
JBrowse link
G Nell2 neural EGFL like 2 IDA PMID:12941464 UniProt PMID:12941464 RGD:10047222 NCBI chr 7:136,526,497...136,853,820
Ensembl chr 7:136,526,496...136,853,957
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO UniProtKB:P42858 (PMID:21768291) RGD PMID:21768291 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISS GO_REF:0000024 ParkinsonsUK-UCL GO_REF:0000024 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Psen2 presenilin 2 ISO UniProtKB:P49769 (MGI:MGI:5616965|PMID:25429133) RGD PMID:25429133 MGI:MGI:5616965 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
JBrowse link
G Slc8a2 solute carrier family 8 member A2 IEA
ISO
GO_REF:0000107
(MGI:MGI:3796351|PMID:17884163)
Ensembl
RGD
PMID:17884163 GO_REF:0000107, MGI:MGI:3796351 NCBI chr 1:78,029,555...78,054,042
Ensembl chr 1:78,025,995...78,060,111
JBrowse link
G Taok1 TAO kinase 1 IEA
ISO
GO_REF:0000107
(PMID:17900936)
Ensembl
RGD
PMID:17900936 GO_REF:0000107 NCBI chr10:62,542,870...62,630,341
Ensembl chr10:62,566,732...62,630,155
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5315335|PMID:21084607)
Ensembl
UniProt
RGD
PMID:21084607 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5315335 NCBI chr 3:111,597,102...111,616,142
Ensembl chr 3:111,597,102...111,616,142
JBrowse link
induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1d calcium voltage-gated channel subunit alpha1 D IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:6,110,294...6,405,022
Ensembl chr16:6,112,150...6,405,117
JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:81,673,862...82,019,219
Ensembl chr17:81,798,756...82,017,682
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:37,950,846...38,211,478
Ensembl chr 3:37,955,069...38,090,526
JBrowse link
G Cdk5 cyclin-dependent kinase 5 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Cnr1 cannabinoid receptor 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:49,307,584...49,333,064
Ensembl chr 5:49,311,030...49,333,056
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 IEA
ISO
GO_REF:0000108
(MGI:MGI:5608612|PMID:25209271)
GOC
RGD
PMID:25209271 GO_REF:0000108, MGI:MGI:5608612 NCBI chr 4:152,087,393...152,380,023
Ensembl chr 4:152,087,379...152,380,184
JBrowse link
positive regulation of presynaptic cytosolic calcium concentration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin-dependent kinase 5 IMP PMID:23699505 ARUK-UCL PMID:23699505 RGD:13792535 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
regulation of presynaptic cytosolic calcium ion concentration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:41,114,606...41,223,138
Ensembl chr 7:41,114,697...41,220,579
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325
JBrowse link
G Atp2b3 ATPase plasma membrane Ca2+ transporting 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:157,236,400...157,312,028
Ensembl chr  X:157,239,306...157,312,028
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550
JBrowse link
G Cacna1e calcium voltage-gated channel subunit alpha1 E IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:71,899,445...72,534,992
Ensembl chr13:71,906,702...72,367,980
JBrowse link
G Calb1 calbindin 1 IMP
IBA
PMID:19658395
PMID:21873635
SynGO
GO_Central
PMID:19658395, PMID:21873635 RGD:7205450, RGD:13792537 NCBI chr 5:29,538,380...29,562,774
Ensembl chr 5:29,538,380...29,562,773
JBrowse link
G Calb2 calbindin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:41,482,743...41,509,617
Ensembl chr19:41,482,728...41,509,658
JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:89,113,984...89,130,830
Ensembl chr 8:89,129,453...89,130,991
JBrowse link
G Kcnh1 potassium voltage-gated channel subfamily H member 1 ISO (MGI:MGI:5917278|PMID:25556795) RGD PMID:25556795 MGI:MGI:5917278 NCBI chr13:110,920,712...111,232,291
Ensembl chr13:110,920,737...111,232,269
JBrowse link
G Marcksl1 MARCKS-like 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:147,714,163...147,716,486
Ensembl chr 5:147,714,163...147,716,485
JBrowse link
G Ncs1 neuronal calcium sensor 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:10,556,250...10,602,672
Ensembl chr 3:10,553,589...10,602,672
JBrowse link
G P2rx2 purinergic receptor P2X 2 EXP
IDA
PMID:16000618 SynGO PMID:16000618, PMID:16000618 RGD:1581702, RGD:1581702 NCBI chr12:52,397,666...52,401,005
Ensembl chr12:52,397,792...52,401,015
JBrowse link
G P2ry2 purinergic receptor P2Y2 EXP
IDA
PMID:16000618 SynGO PMID:16000618, PMID:16000618 RGD:1581702, RGD:1581702 NCBI chr 1:166,031,228...166,045,423
Ensembl chr 1:166,031,272...166,037,424
JBrowse link
G Scgn secretagogin, EF-hand calcium binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,357,888...43,399,321
Ensembl chr17:43,357,888...43,399,321
JBrowse link
G Tspoap1 TSPO associated protein 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:75,053,956...75,079,615
Ensembl chr10:75,055,020...75,076,434
JBrowse link
synaptic vesicle lumen acidification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 IC GO_REF:0000111 SynGO GO_REF:0000111 NCBI chr 4:115,417,100...115,435,754
Ensembl chr 4:115,416,580...115,437,206
JBrowse link
G Clcn3 chloride voltage-gated channel 3 ISO MGI:MGI:2447864 (MGI:MGI:2182197|PMID:11182090), (MGI:MGI:5006894|PMID:21378974) RGD PMID:11182090, PMID:21378974 MGI:MGI:2182197, MGI:MGI:5006894 NCBI chr16:32,448,821...32,520,649
Ensembl chr16:32,449,116...32,519,148
JBrowse link
G Slc17a7 solute carrier family 17 member 7 ISO MGI:MGI:3051945 (MGI:MGI:3836822|PMID:19169251) RGD PMID:19169251 MGI:MGI:3836822 NCBI chr 1:101,161,265...101,172,292
Ensembl chr 1:101,161,252...101,173,174
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular homeostasis 1045
        neuron cellular homeostasis 39
          regulation of presynaptic cytosolic calcium ion concentration + 21
          synaptic vesicle lumen acidification + 3
Path 2
Term Annotations click to browse term
  biological_process 20014
    biological regulation 13759
      regulation of biological quality 4284
        homeostatic process 2090
          cellular homeostasis 1045
            neuron cellular homeostasis 39
              regulation of presynaptic cytosolic calcium ion concentration + 21
              synaptic vesicle lumen acidification + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.