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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome organization involved in meiotic cell cycle
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Accession:GO:0070192 term browser browse the term
Definition:A process of chromosome organization that is involved in a meiotic cell cycle.
Synonyms:exact_synonym: chromosome organisation involved in meiosis;   meiotic chromosome organization


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chromosome organization involved in meiotic cell cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link 8 58,015,938 58,119,973 RGD:1624291
G Atrx ATRX, chromatin remodeler JBrowse link X 76,820,110 76,979,155 RGD:1624291
RGD:1600115
G Ccne1 cyclin E1 JBrowse link 1 94,485,830 94,495,112 RGD:1624291
G Ccne2 cyclin E2 JBrowse link 5 24,434,077 24,446,406 RGD:1624291
G Dmc1 DNA meiotic recombinase 1 JBrowse link 7 120,796,217 120,840,524 RGD:13792537
G Meioc meiosis specific with coiled-coil domain JBrowse link 10 90,622,954 90,641,883 RGD:1624291
G Rad50 RAD50 double strand break repair protein JBrowse link 10 39,002,130 39,054,042 RGD:1624291
RGD:13792537
G Rad51 RAD51 recombinase JBrowse link 3 110,918,240 110,942,920 RGD:1624291
RGD:13792537
chiasma assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 10 73,507,009 73,632,742 RGD:1624291
G Ccnb1ip1 cyclin B1 interacting protein 1 JBrowse link 15 27,720,220 27,736,528 RGD:1624291
G Rnf212 ring finger protein 212 JBrowse link 14 1,959,148 1,998,077 RGD:1624291
G Sycp1 synaptonemal complex protein 1 JBrowse link 2 205,274,766 205,426,869 RGD:1624291
RGD:13792537
RGD:1600115
G Sycp3 synaptonemal complex protein 3 JBrowse link 7 29,029,887 29,044,344 RGD:1624291
G Tex11 testis expressed 11 JBrowse link X 70,670,212 70,946,621 RGD:1624291
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 10 37,439,947 37,454,867 RGD:1624291
female meiosis sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rad51c RAD51 paralog C JBrowse link 10 74,697,713 74,724,004 RGD:1624291
G Sycp3 synaptonemal complex protein 3 JBrowse link 7 29,029,887 29,044,344 RGD:1624291
lateral element assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sycp1 synaptonemal complex protein 1 JBrowse link 2 205,274,766 205,426,869 RGD:1624291
RGD:13792537
RGD:1600115
G Sycp3 synaptonemal complex protein 3 JBrowse link 7 29,029,887 29,044,344 RGD:1624291
meiotic attachment of telomere to nuclear envelope term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Majin membrane anchored junction protein JBrowse link 1 221,540,551 221,594,124 RGD:1624291
RGD:13792537
RGD:1600115
G Rad21l1 RAD21 cohesin complex component like 1 JBrowse link 3 147,163,335 147,191,008 RGD:1624291
G Sun1 Sad1 and UNC84 domain containing 1 JBrowse link 12 17,488,482 17,533,334 RGD:1624291
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link 19 682,013 736,358 RGD:1624291
RGD:13792537
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link 3 114,129,387 114,147,943 RGD:1624291
meiotic chromosome condensation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Incenp inner centromere protein JBrowse link 1 225,923,448 225,953,384 RGD:13792537
G Mastl microtubule associated serine/threonine kinase-like JBrowse link 17 89,839,562 89,875,855 RGD:1624291
G Ncapd2 non-SMC condensin I complex, subunit D2 JBrowse link 4 157,682,855 157,705,903 RGD:13792537
G Ncapd3 non-SMC condensin II complex, subunit D3 JBrowse link 8 28,075,629 28,145,024 RGD:13792537
G Ncaph non-SMC condensin I complex, subunit H JBrowse link 3 119,583,798 119,611,148 RGD:1624291
G Ncaph2 non-SMC condensin II complex, subunit H2 JBrowse link 7 130,326,597 130,343,655 RGD:1600115
RGD:13792537
RGD:1624291
G Smc2 structural maintenance of chromosomes 2 JBrowse link 5 68,717,509 68,764,080 RGD:1624291
G Smc4 structural maintenance of chromosomes 4 JBrowse link 2 165,600,934 165,629,415 RGD:1624291
meiotic sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hormad1 HORMA domain containing 1 JBrowse link 2 197,681,820 197,720,197 RGD:1600115
RGD:1624291
G Hormad2 HORMA domain containing 2 JBrowse link 14 84,576,856 84,662,237 RGD:1624291
G Sgo1 shugoshin 1 JBrowse link 9 4,420,158 4,435,939 RGD:13792537
G Sgo2 shugoshin 2 JBrowse link 9 64,898,380 64,923,023 RGD:13792537
meiotic sister chromatid cohesion involved in meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Meikin meiotic kinetochore factor JBrowse link 10 39,726,373 39,776,458 RGD:1624291
RGD:13792537
G Sgo2 shugoshin 2 JBrowse link 9 64,898,380 64,923,023 RGD:1624291
meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase JBrowse link 3 120,373,604 120,404,910 RGD:13792537
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B JBrowse link 3 110,367,949 110,420,471 RGD:13792537
G Meikin meiotic kinetochore factor JBrowse link 10 39,726,373 39,776,458 RGD:1624291
RGD:13792537
G Ppp2r1a protein phosphatase 2 scaffold subunit A alpha JBrowse link 1 60,717,386 60,736,629 RGD:1624291
G Sgo2 shugoshin 2 JBrowse link 9 64,898,380 64,923,023 RGD:1624291
meiotic telomere clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link 8 58,015,938 58,119,973 RGD:1624291
G Cep63 centrosomal protein 63 JBrowse link 8 111,063,988 111,116,014 RGD:1624291
G Majin membrane anchored junction protein JBrowse link 1 221,540,551 221,594,124 RGD:1624291
RGD:1600115
G Mei1 meiotic double-stranded break formation protein 1 JBrowse link 7 123,308,041 123,361,391 RGD:1624291
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:1624291
RGD:1600115
G Spo11 SPO11, initiator of meiotic double stranded breaks JBrowse link 3 170,991,573 171,008,226 RGD:1624291
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link 19 682,013 736,358 RGD:1624291
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link 3 114,129,387 114,147,943 RGD:1624291
G Terf1 telomeric repeat binding factor 1 JBrowse link 5 2,853,455 2,882,731 RGD:1624291
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 10 37,439,947 37,454,867 RGD:1624291
positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sgo2 shugoshin 2 JBrowse link 9 64,898,380 64,923,023 RGD:1624291
synapsis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd31 ankyrin repeat domain 31 JBrowse link 2 27,571,129 27,743,668 RGD:1624291
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 10 73,507,009 73,632,742 RGD:1624291
G Ccne1 cyclin E1 JBrowse link 1 94,485,830 94,495,112 RGD:1624291
RGD:1600115
G Ccne2 cyclin E2 JBrowse link 5 24,434,077 24,446,406 RGD:1624291
G Dmc1 DNA meiotic recombinase 1 JBrowse link 7 120,796,217 120,840,524 RGD:1624291
G Fancd2 FA complementation group D2 JBrowse link 4 145,489,869 145,551,479 RGD:1624291
RGD:13792537
RGD:1600115
G Hormad1 HORMA domain containing 1 JBrowse link 2 197,681,820 197,720,197 RGD:1624291
G Iho1 interactor of HORMAD1 1 JBrowse link 8 117,182,484 117,215,390 RGD:1624291
G Kash5 KASH domain containing 5 JBrowse link 1 101,180,497 101,203,048 RGD:1624291
RGD:13792537
G Mael maelstrom spermatogenic transposon silencer JBrowse link 13 84,412,569 84,452,140 RGD:1624291
G Majin membrane anchored junction protein JBrowse link 1 221,540,551 221,594,124 RGD:1624291
RGD:13792537
RGD:1600115
G Mei4 meiotic double-stranded break formation protein 4 JBrowse link 8 89,369,417 89,556,942 RGD:1624291
RGD:13792537
G Meiob meiosis specific with OB-fold JBrowse link 10 14,174,645 14,206,026 RGD:1600115
RGD:1624291
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:1624291
RGD:1600115
G Morc2b microrchidia 2B JBrowse link 7 15,479,754 15,483,834 RGD:1600115
G Mre11 MRE11 homolog, double strand break repair nuclease JBrowse link 8 13,304,355 13,350,329 RGD:1624291
RGD:1600115
G Msh4 mutS homolog 4 JBrowse link 2 260,057,708 260,108,897 RGD:1624291
G Msh5 mutS homolog 5 JBrowse link 20 5,020,690 5,037,125 RGD:1624291
G Ndc1 NDC1 transmembrane nucleoporin JBrowse link 5 126,976,636 127,022,941 RGD:1624291
RGD:1600115
G Prdm9 PR/SET domain 9 JBrowse link 1 57,533,602 57,555,155 RGD:1600115
RGD:1624291
G Rad21l1 RAD21 cohesin complex component like 1 JBrowse link 3 147,163,335 147,191,008 RGD:1624291
G Rec8 REC8 meiotic recombination protein JBrowse link 15 34,296,922 34,304,387 RGD:1624291
G Rnf212 ring finger protein 212 JBrowse link 14 1,959,148 1,998,077 RGD:13792537
G Sirt7 sirtuin 7 JBrowse link 10 109,796,046 109,802,821 RGD:1600115
RGD:1624291
G Six6os1 Six6 opposite strand transcript 1 JBrowse link 6 95,761,718 95,797,314 RGD:1624291
RGD:13792537
G Spata22 spermatogenesis associated 22 JBrowse link 10 59,893,064 59,910,769 RGD:1624291
G Spo11 SPO11, initiator of meiotic double stranded breaks JBrowse link 3 170,991,573 171,008,226 RGD:1624291
G Stag3 stromal antigen 3 JBrowse link 12 19,599,741 19,630,775 RGD:1624291
G Sun1 Sad1 and UNC84 domain containing 1 JBrowse link 12 17,488,482 17,533,334 RGD:1624291
G Sycp1 synaptonemal complex protein 1 JBrowse link 2 205,274,766 205,426,869 RGD:1624291
RGD:1600115
G Sycp3 synaptonemal complex protein 3 JBrowse link 7 29,029,887 29,044,344 RGD:1624291
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link 19 682,013 736,358 RGD:1624291
RGD:13792537
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link 3 114,129,387 114,147,943 RGD:1624291
G Tex15 testis expressed 15, meiosis and synapsis associated JBrowse link 16 62,313,284 62,373,288 RGD:1624291
synaptonemal complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ago4 argonaute RISC component 4 JBrowse link 5 144,501,875 144,557,165 RGD:1624291
G Bag6 BAG cochaperone 6 JBrowse link 20 5,124,512 5,138,084 RGD:1624291
RGD:1600115
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 1 143,171,457 143,278,485 RGD:1624291
G Ehmt2 euchromatic histone lysine methyltransferase 2 JBrowse link 20 4,576,033 4,592,980 RGD:1624291
G Hormad1 HORMA domain containing 1 JBrowse link 2 197,681,820 197,720,197 RGD:1624291
RGD:1600115
G Mcmdc2 minichromosome maintenance domain containing 2 JBrowse link 5 8,973,861 9,039,616 RGD:1624291
RGD:1600115
G Meioc meiosis specific with coiled-coil domain JBrowse link 10 90,622,954 90,641,883 RGD:1624291
G Mlh3 mutL homolog 3 JBrowse link 6 109,059,386 109,095,876 RGD:1624291
G Rad21l1 RAD21 cohesin complex component like 1 JBrowse link 3 147,163,335 147,191,008 RGD:1624291
G Rec8 REC8 meiotic recombination protein JBrowse link 15 34,296,922 34,304,387 RGD:1624291
G Spo11 SPO11, initiator of meiotic double stranded breaks JBrowse link 3 170,991,573 171,008,226 RGD:1624291
G Syce1 synaptonemal complex central element protein 1 JBrowse link 1 213,523,638 213,534,641 RGD:1600115
G Syce1l synaptonemal complex central element protein 1-like JBrowse link 19 45,946,422 45,956,822 RGD:1600115
G Syce2 synaptonemal complex central element protein 2 JBrowse link 19 25,982,003 26,002,399 RGD:1600115
G Syce3 synaptonemal complex central element protein 3 JBrowse link 7 130,360,511 130,386,673 RGD:1624291
RGD:13792537
G Sycp1 synaptonemal complex protein 1 JBrowse link 2 205,274,766 205,426,869 RGD:1600115
RGD:1624291
G Sycp3 synaptonemal complex protein 3 JBrowse link 7 29,029,887 29,044,344 RGD:1624291
G Syde1 synapse defective Rho GTPase homolog 1 JBrowse link 7 14,037,646 14,043,632 RGD:1624291
G Tex11 testis expressed 11 JBrowse link X 70,670,212 70,946,621 RGD:1624291
RGD:13792537
G Tex12 testis expressed 12 JBrowse link 8 54,991,501 54,999,454 RGD:1624291
RGD:13792537
G Tex15 testis expressed 15, meiosis and synapsis associated JBrowse link 16 62,313,284 62,373,288 RGD:1624291
G Trip13 thyroid hormone receptor interactor 13 JBrowse link 1 31,967,980 32,012,923 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19676
    reproductive process 1756
      meiotic cell cycle process 213
        chromosome organization involved in meiotic cell cycle 74
          centromere detachment from spindle pole body involved in meiotic chromosome organization 0
          karyosome formation + 0
          kinetochore disassembly involved in meiotic chromosome organization 0
          linear element maturation + 0
          meiotic centromere clustering 0
          meiotic chromosome condensation 8
          meiotic chromosome decondensation 0
          meiotic sister chromatid cohesion + 10
          meiotic sister chromatid segregation + 10
          meiotic telomere clustering + 12
          meiotic telomere maintenance via semi-conservative replication 0
          premeiotic DNA replication DNA duplex unwinding 0
          synapsis + 51
          synaptonemal complex assembly + 22
Path 2
Term Annotations click to browse term
  biological_process 19676
    cellular process 18449
      cellular component organization or biogenesis 6664
        cellular component organization 6424
          organelle organization 4011
            chromosome organization 1231
              chromosome organization involved in meiotic cell cycle 74
                centromere detachment from spindle pole body involved in meiotic chromosome organization 0
                karyosome formation + 0
                kinetochore disassembly involved in meiotic chromosome organization 0
                linear element maturation + 0
                meiotic centromere clustering 0
                meiotic chromosome condensation 8
                meiotic chromosome decondensation 0
                meiotic sister chromatid cohesion + 10
                meiotic sister chromatid segregation + 10
                meiotic telomere clustering + 12
                meiotic telomere maintenance via semi-conservative replication 0
                premeiotic DNA replication DNA duplex unwinding 0
                synapsis + 51
                synaptonemal complex assembly + 22
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.