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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome organization involved in meiotic cell cycle
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Accession:GO:0070192 term browser browse the term
Definition:A process of chromosome organization that is involved in a meiotic cell cycle.
Synonyms:exact_synonym: chromosome organisation involved in meiosis;   meiotic chromosome organization


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chromosome organization involved in meiotic cell cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 11 103,109,979 103,256,405 RGD:9068941
G ATRX ATRX chromatin remodeler JBrowse link X 66,682,968 66,969,421 RGD:9068941
G CCNE1 cyclin E1 JBrowse link 19 26,739,285 26,751,630 RGD:9068941
G CCNE2 cyclin E2 JBrowse link 8 91,499,647 91,518,488 RGD:9068941
G MEIOC meiosis specific with coiled-coil domain JBrowse link 17 12,725,114 12,744,974 RGD:9068941
G RAD50 RAD50 double strand break repair protein JBrowse link 5 127,972,630 128,059,911 RGD:9068941
G RAD51 RAD51 recombinase JBrowse link 15 19,638,310 19,672,474 RGD:9068941
chiasma assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 17 55,786,568 55,973,366 RGD:9068941
G CCNB1IP1 cyclin B1 interacting protein 1 JBrowse link 14 1,182,025 1,205,471 RGD:9068941
G RNF212 ring finger protein 212 JBrowse link 4 1,167,176 1,259,080 RGD:9068941
G SYCP1 synaptonemal complex protein 1 JBrowse link 1 87,565,888 87,701,530 RGD:9068941
G SYCP3 synaptonemal complex protein 3 JBrowse link 12 99,311,260 99,322,007 RGD:9068941
G TEX11 testis expressed 11 JBrowse link X 59,796,821 60,175,517 RGD:9068941
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 129,775,011 129,794,853 RGD:9068941
female meiosis sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RAD51C RAD51 paralog C JBrowse link 17 52,769,446 52,808,467 RGD:9068941
G SYCP3 synaptonemal complex protein 3 JBrowse link 12 99,311,260 99,322,007 RGD:9068941
homologous chromosome pairing at meiosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANKRD31 ankyrin repeat domain 31 JBrowse link 5 40,060,599 40,236,468 RGD:9068941
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 17 55,786,568 55,973,366 RGD:9068941
G C14H14orf39 chromosome 14 C14orf39 homolog JBrowse link 14 41,040,315 41,090,267 RGD:9068941
G CCNE1 cyclin E1 JBrowse link 19 26,739,285 26,751,630 RGD:9068941
G CCNE2 cyclin E2 JBrowse link 8 91,499,647 91,518,488 RGD:9068941
G DMC1 DNA meiotic recombinase 1 JBrowse link 22 19,433,989 19,485,804 RGD:9068941
G FANCD2 FA complementation group D2 JBrowse link 3 9,932,292 10,037,332 RGD:9068941
G HORMAD1 HORMA domain containing 1 JBrowse link 1 126,054,585 126,077,361 RGD:9068941
G IHO1 interactor of HORMAD1 1 JBrowse link 3 49,122,120 49,181,228 RGD:9068941
G KASH5 KASH domain containing 5 JBrowse link 19 46,402,586 46,432,002 RGD:9068941
G LOC100972985 meiosis specific with OB-fold JBrowse link 16 835,420 874,178 RGD:9068941
G MAEL maelstrom spermatogenic transposon silencer JBrowse link 1 142,341,646 142,442,521 RGD:9068941
G MAJIN membrane anchored junction protein JBrowse link 11 60,294,618 60,328,902 RGD:9068941
G MEI4 meiotic double-stranded break formation protein 4 JBrowse link 6 75,500,343 75,769,319 RGD:9068941
G MLH1 mutL homolog 1 JBrowse link 3 36,899,828 36,957,076 RGD:9068941
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 89,418,537 89,500,705 RGD:9068941
G MSH4 mutS homolog 4 JBrowse link 1 75,011,947 75,130,036 RGD:9068941
G MSH5 mutS homolog 5 JBrowse link 6 31,401,343 31,424,665 RGD:9068941
G NDC1 NDC1 transmembrane nucleoporin JBrowse link 1 53,041,298 53,113,181 RGD:9068941
G PRDM9 PR/SET domain 9 JBrowse link 5 86,847,131 86,856,802 RGD:9068941
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 20 1,385,935 1,413,301 RGD:9068941
G REC8 REC8 meiotic recombination protein JBrowse link 14 4,948,100 4,956,492 RGD:9068941
G SIRT7 sirtuin 7 JBrowse link 17 76,317,560 76,323,761 RGD:9068941
G SPATA22 spermatogenesis associated 22 JBrowse link 17 3,120,296 3,532,343 RGD:9068941
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 20 53,669,128 53,684,328 RGD:9068941
G STAG3 stromal antigen 3 JBrowse link 7 92,215,064 92,249,202 RGD:9068941
G SUN1 Sad1 and UNC84 domain containing 1 JBrowse link 7 971,632 1,031,152 RGD:9068941
G SYCP1 synaptonemal complex protein 1 JBrowse link 1 87,565,888 87,701,530 RGD:9068941
G SYCP3 synaptonemal complex protein 3 JBrowse link 12 99,311,260 99,322,007 RGD:9068941
G TERB1 telomere repeat binding bouquet formation protein 1 JBrowse link 16 47,071,709 47,118,205 RGD:9068941
G TERB2 telomere repeat binding bouquet formation protein 2 JBrowse link 15 23,904,880 23,927,325 RGD:9068941
G TEX15 testis expressed 15, meiosis and synapsis associated JBrowse link 8 30,145,628 30,232,903 RGD:9068941
lateral element assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SYCP1 synaptonemal complex protein 1 JBrowse link 1 87,565,888 87,701,530 RGD:9068941
G SYCP3 synaptonemal complex protein 3 JBrowse link 12 99,311,260 99,322,007 RGD:9068941
meiotic attachment of telomere to nuclear envelope term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MAJIN membrane anchored junction protein JBrowse link 11 60,294,618 60,328,902 RGD:9068941
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 20 1,385,935 1,413,301 RGD:9068941
G SUN1 Sad1 and UNC84 domain containing 1 JBrowse link 7 971,632 1,031,152 RGD:9068941
G TERB1 telomere repeat binding bouquet formation protein 1 JBrowse link 16 47,071,709 47,118,205 RGD:9068941
G TERB2 telomere repeat binding bouquet formation protein 2 JBrowse link 15 23,904,880 23,927,325 RGD:9068941
meiotic chromosome condensation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MASTL microtubule associated serine/threonine kinase like JBrowse link 10 27,264,475 27,296,085 RGD:9068941
G NCAPH non-SMC condensin I complex subunit H JBrowse link 2A 102,939,357 102,980,091 RGD:9068941
G NCAPH2 non-SMC condensin II complex subunit H2 JBrowse link 22 30,754,994 30,771,103 RGD:9068941
G SMC2 structural maintenance of chromosomes 2 JBrowse link 9 75,273,163 75,323,486 RGD:9068941
G SMC4 structural maintenance of chromosomes 4 JBrowse link 3 157,421,548 157,456,593 RGD:9068941
meiotic sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HORMAD1 HORMA domain containing 1 JBrowse link 1 126,054,585 126,077,361 RGD:9068941
G HORMAD2 HORMA domain containing 2 JBrowse link 22 11,113,654 11,213,291 RGD:9068941
meiotic sister chromatid cohesion involved in meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MEIKIN meiotic kinetochore factor JBrowse link 5 127,229,311 127,369,783 RGD:9068941
G SGO2 shugoshin 2 JBrowse link 2B 87,779,677 87,837,285 RGD:9068941
meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MEIKIN meiotic kinetochore factor JBrowse link 5 127,229,311 127,369,783 RGD:9068941
G PPP2R1A protein phosphatase 2 scaffold subunit Aalpha JBrowse link 19 49,133,295 49,169,447 RGD:9068941
G SGO2 shugoshin 2 JBrowse link 2B 87,779,677 87,837,285 RGD:9068941
meiotic telomere clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 11 103,109,979 103,256,405 RGD:9068941
G CEP63 centrosomal protein 63 JBrowse link 3 131,532,450 131,609,240 RGD:9068941
G MAJIN membrane anchored junction protein JBrowse link 11 60,294,618 60,328,902 RGD:9068941
G MEI1 meiotic double-stranded break formation protein 1 JBrowse link 22 22,592,508 22,692,370 RGD:9068941
G MLH1 mutL homolog 1 JBrowse link 3 36,899,828 36,957,076 RGD:9068941
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 20 53,669,128 53,684,328 RGD:9068941
G TERB1 telomere repeat binding bouquet formation protein 1 JBrowse link 16 47,071,709 47,118,205 RGD:9068941
G TERB2 telomere repeat binding bouquet formation protein 2 JBrowse link 15 23,904,880 23,927,325 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 8 69,545,115 69,583,997 RGD:9068941
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 129,775,011 129,794,853 RGD:9068941
positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SGO2 shugoshin 2 JBrowse link 2B 87,779,677 87,837,285 RGD:9068941
synaptonemal complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGO4 argonaute RISC component 4 JBrowse link 1 35,072,045 35,122,418 RGD:9068941
G BAG6 BAG cochaperone 6 JBrowse link 6 31,300,126 31,313,829 RGD:9068941
G CPEB1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 15 62,949,264 63,053,994 RGD:9068941
G EHMT2 euchromatic histone lysine methyltransferase 2 JBrowse link 6 31,542,946 31,560,894 RGD:9068941
G HORMAD1 HORMA domain containing 1 JBrowse link 1 126,054,585 126,077,361 RGD:9068941
G MCMDC2 minichromosome maintenance domain containing 2 JBrowse link 8 63,412,462 63,465,258 RGD:9068941
G MEIOC meiosis specific with coiled-coil domain JBrowse link 17 12,725,114 12,744,974 RGD:9068941
G MLH3 mutL homolog 3 JBrowse link 14 55,568,033 55,603,672 RGD:9068941
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 20 1,385,935 1,413,301 RGD:9068941
G REC8 REC8 meiotic recombination protein JBrowse link 14 4,948,100 4,956,492 RGD:9068941
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 20 53,669,128 53,684,328 RGD:9068941
G SYCE3 synaptonemal complex central element protein 3 JBrowse link 22 30,797,389 30,809,517 RGD:9068941
G SYCP1 synaptonemal complex protein 1 JBrowse link 1 87,565,888 87,701,530 RGD:9068941
G SYCP3 synaptonemal complex protein 3 JBrowse link 12 99,311,260 99,322,007 RGD:9068941
G SYDE1 synapse defective Rho GTPase homolog 1 JBrowse link 19 14,640,493 14,648,080 RGD:9068941
G TEX11 testis expressed 11 JBrowse link X 59,796,821 60,175,517 RGD:9068941
G TEX12 testis expressed 12 JBrowse link 11 107,048,417 107,053,655 RGD:9068941
G TEX15 testis expressed 15, meiosis and synapsis associated JBrowse link 8 30,145,628 30,232,903 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12490
    reproductive process 1463
      meiotic cell cycle process 175
        chromosome organization involved in meiotic cell cycle 63
          centromere detachment from spindle pole body involved in meiotic chromosome organization 0
          homologous chromosome pairing at meiosis + 46
          karyosome formation + 0
          kinetochore disassembly involved in meiotic chromosome organization 0
          linear element maturation + 0
          meiotic centromere clustering 0
          meiotic chromosome condensation 5
          meiotic chromosome decondensation 0
          meiotic sister chromatid cohesion + 7
          meiotic sister chromatid segregation + 7
          meiotic telomere clustering + 12
          meiotic telomere maintenance via semi-conservative replication 0
          premeiotic DNA replication DNA duplex unwinding 0
          synaptonemal complex assembly + 18
Path 2
Term Annotations click to browse term
  biological_process 12490
    cellular process 11599
      cellular component organization or biogenesis 4957
        cellular component organization 4877
          organelle organization 3003
            chromosome organization 874
              chromosome organization involved in meiotic cell cycle 63
                centromere detachment from spindle pole body involved in meiotic chromosome organization 0
                homologous chromosome pairing at meiosis + 46
                karyosome formation + 0
                kinetochore disassembly involved in meiotic chromosome organization 0
                linear element maturation + 0
                meiotic centromere clustering 0
                meiotic chromosome condensation 5
                meiotic chromosome decondensation 0
                meiotic sister chromatid cohesion + 7
                meiotic sister chromatid segregation + 7
                meiotic telomere clustering + 12
                meiotic telomere maintenance via semi-conservative replication 0
                premeiotic DNA replication DNA duplex unwinding 0
                synaptonemal complex assembly + 18
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.