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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome organization involved in meiotic cell cycle
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Accession:GO:0070192 term browser browse the term
Definition:A process of chromosome organization that is involved in a meiotic cell cycle.
Synonyms:exact_synonym: chromosome organisation involved in meiosis;   meiotic chromosome organization


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chromosome organization involved in meiotic cell cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link NW_004955412 10,422,753 10,531,406 RGD:9068941
G Atrx ATRX chromatin remodeler JBrowse link NW_004955557 947,368 1,252,701 RGD:9068941
G Ccne1 cyclin E1 JBrowse link NW_004955468 7,803,610 7,814,872 RGD:9068941
G Ccne2 cyclin E2 JBrowse link NW_004955417 11,027,749 11,039,945 RGD:9068941
G Meioc meiosis specific with coiled-coil domain JBrowse link NW_004955451 17,534,644 17,547,095 RGD:9068941
G Rad50 RAD50 double strand break repair protein JBrowse link NW_004955408 3,953,801 4,035,494 RGD:9068941
G Rad51 RAD51 recombinase JBrowse link NW_004955416 7,566,715 7,590,628 RGD:9068941
chiasma assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link NW_004955451 2,705,834 2,820,610 RGD:9068941
G Ccnb1ip1 cyclin B1 interacting protein 1 JBrowse link NW_004955550 1,108,764 1,138,862 RGD:9068941
G Rnf212 ring finger protein 212 JBrowse link NW_004955514 525,430 559,037 RGD:9068941
G Sycp1 synaptonemal complex protein 1 JBrowse link NW_004955435 18,157,173 18,291,732 RGD:9068941
G Sycp3 synaptonemal complex protein 3 JBrowse link NW_004955405 37,093,330 37,102,789 RGD:9068941
G Tex11 testis expressed 11 JBrowse link NW_004955475 10,057,708 10,432,087 RGD:9068941
G Ube2b ubiquitin conjugating enzyme E2 B JBrowse link NW_004955408 5,552,619 5,572,145 RGD:9068941
female meiosis sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rad51c RAD51 paralog C JBrowse link NW_004955451 4,053,195 4,178,226 RGD:9068941
G Sycp3 synaptonemal complex protein 3 JBrowse link NW_004955405 37,093,330 37,102,789 RGD:9068941
homologous chromosome pairing at meiosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd31 ankyrin repeat domain 31 JBrowse link NW_004955425 25,483,400 25,647,904 RGD:9068941
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link NW_004955451 2,705,834 2,820,610 RGD:9068941
G Ccne1 cyclin E1 JBrowse link NW_004955468 7,803,610 7,814,872 RGD:9068941
G Ccne2 cyclin E2 JBrowse link NW_004955417 11,027,749 11,039,945 RGD:9068941
G CUNH14orf39 chromosome unknown C14orf39 homolog JBrowse link NW_004955466 9,158,022 9,194,088 RGD:9068941
G Dmc1 DNA meiotic recombinase 1 JBrowse link NW_004955413 24,685,311 24,724,269 RGD:9068941
G Fancd2 FA complementation group D2 JBrowse link NW_004955561 1,460,080 1,538,026 RGD:9068941
G Hormad1 HORMA domain containing 1 JBrowse link NW_004955413 130,214 155,381 RGD:9068941
G Iho1 interactor of HORMAD1 1 JBrowse link NW_004955532 1,198,316 1,226,875 RGD:9068941
G Kash5 KASH domain containing 5 JBrowse link NW_004955559 1,416,844 1,438,451 RGD:9068941
G Mael maelstrom spermatogenic transposon silencer JBrowse link NW_004955462 9,902,978 9,934,814 RGD:9068941
G Majin membrane anchored junction protein JBrowse link NW_004955422 20,216,773 20,249,042 RGD:9068941
G Mei4 meiotic double-stranded break formation protein 4 JBrowse link NW_004955502 5,835,608 6,017,945 RGD:9068941
G Meiob meiosis specific with OB-fold JBrowse link NW_004955442 15,409,344 15,444,996 RGD:9068941
G Mlh1 mutL homolog 1 JBrowse link NW_004955421 3,890,291 3,936,892 RGD:9068941
G Msh4 mutS homolog 4 JBrowse link NW_004955423 17,093,573 17,154,910 RGD:9068941
G Msh5 mutS homolog 5 JBrowse link NW_004955437 275,976 297,268 RGD:9068941
G Ndc1 NDC1 transmembrane nucleoporin JBrowse link NW_004955464 5,424,710 5,476,657 RGD:9068941
G Rad21l1 RAD21 cohesin complex component like 1 JBrowse link NW_004955596 455,932 485,853 RGD:9068941
G Rec8 REC8 meiotic recombination protein JBrowse link NW_004955409 36,223,783 36,231,749 RGD:9068941
G Sirt7 sirtuin 7 JBrowse link NW_004955506 1,252,271 1,258,728 RGD:9068941
G Spata22 spermatogenesis associated 22 JBrowse link NW_004955467 13,304,314 13,325,228 RGD:9068941
G Spo11 SPO11 initiator of meiotic double stranded breaks JBrowse link NW_004955445 2,088,144 2,103,385 RGD:9068941
G Stag3 stromal antigen 3 JBrowse link NW_004955573 602,635 631,775 RGD:9068941
G Sun1 Sad1 and UNC84 domain containing 1 JBrowse link NW_004955460 8,560,824 8,619,142 RGD:9068941
G Sycp1 synaptonemal complex protein 1 JBrowse link NW_004955435 18,157,173 18,291,732 RGD:9068941
G Sycp3 synaptonemal complex protein 3 JBrowse link NW_004955405 37,093,330 37,102,789 RGD:9068941
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link NW_004955433 23,290,030 23,332,886 RGD:9068941
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link NW_004955409 8,352,685 8,371,576 RGD:9068941
G Tex15 testis expressed 15, meiosis and synapsis associated JBrowse link NW_004955463 7,296,204 7,360,935 RGD:9068941
lateral element assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sycp1 synaptonemal complex protein 1 JBrowse link NW_004955435 18,157,173 18,291,732 RGD:9068941
G Sycp3 synaptonemal complex protein 3 JBrowse link NW_004955405 37,093,330 37,102,789 RGD:9068941
meiotic attachment of telomere to nuclear envelope term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Majin membrane anchored junction protein JBrowse link NW_004955422 20,216,773 20,249,042 RGD:9068941
G Rad21l1 RAD21 cohesin complex component like 1 JBrowse link NW_004955596 455,932 485,853 RGD:9068941
G Sun1 Sad1 and UNC84 domain containing 1 JBrowse link NW_004955460 8,560,824 8,619,142 RGD:9068941
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link NW_004955433 23,290,030 23,332,886 RGD:9068941
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link NW_004955409 8,352,685 8,371,576 RGD:9068941
meiotic chromosome condensation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mastl microtubule associated serine/threonine kinase like JBrowse link NW_004955429 2,591,173 2,617,084 RGD:9068941
G Ncaph non-SMC condensin I complex subunit H JBrowse link NW_004955470 3,878,896 3,909,087 RGD:9068941
G Ncaph2 non-SMC condensin II complex subunit H2 JBrowse link NW_004955413 33,492,348 33,503,804 RGD:9068941
G Smc2 structural maintenance of chromosomes 2 JBrowse link NW_004955419 22,245,843 22,294,508 RGD:9068941
G Smc4 structural maintenance of chromosomes 4 JBrowse link NW_004955448 10,926,653 10,960,624 RGD:9068941
meiotic sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hormad1 HORMA domain containing 1 JBrowse link NW_004955413 130,214 155,381 RGD:9068941
G Hormad2 HORMA domain containing 2 JBrowse link NW_004955455 4,309,397 4,462,932 RGD:9068941
meiotic sister chromatid cohesion involved in meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Meikin meiotic kinetochore factor JBrowse link NW_004955408 3,245,147 3,331,795 RGD:9068941
G Sgo2 shugoshin 2 JBrowse link NW_004955403 879,354 905,605 RGD:9068941
meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Meikin meiotic kinetochore factor JBrowse link NW_004955408 3,245,147 3,331,795 RGD:9068941
G Ppp2r1a protein phosphatase 2 scaffold subunit Aalpha JBrowse link NW_004955558 381,794 410,485 RGD:9068941
G Sgo2 shugoshin 2 JBrowse link NW_004955403 879,354 905,605 RGD:9068941
meiotic telomere clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link NW_004955412 10,422,753 10,531,406 RGD:9068941
G Cep63 centrosomal protein 63 JBrowse link NW_004955501 4,032,281 4,095,990 RGD:9068941
G Majin membrane anchored junction protein JBrowse link NW_004955422 20,216,773 20,249,042 RGD:9068941
G Mei1 meiotic double-stranded break formation protein 1 JBrowse link NW_004955413 27,188,013 27,247,608 RGD:9068941
G Mlh1 mutL homolog 1 JBrowse link NW_004955421 3,890,291 3,936,892 RGD:9068941
G Spo11 SPO11 initiator of meiotic double stranded breaks JBrowse link NW_004955445 2,088,144 2,103,385 RGD:9068941
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link NW_004955433 23,290,030 23,332,886 RGD:9068941
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link NW_004955409 8,352,685 8,371,576 RGD:9068941
G Terf1 telomeric repeat binding factor 1 JBrowse link NW_004955444 7,103,282 7,149,450 RGD:9068941
G Ube2b ubiquitin conjugating enzyme E2 B JBrowse link NW_004955408 5,552,619 5,572,145 RGD:9068941
positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sgo2 shugoshin 2 JBrowse link NW_004955403 879,354 905,605 RGD:9068941
synaptonemal complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ago4 argonaute RISC component 4 JBrowse link NW_004955452 13,882,416 13,922,590 RGD:9068941
G Bag6 BAG cochaperone 6 JBrowse link NW_004955437 176,848 188,243 RGD:9068941
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 JBrowse link NW_004955416 13,963,300 14,038,691 RGD:9068941
G Ehmt2 euchromatic histone lysine methyltransferase 2 JBrowse link NW_004955437 396,736 411,144 RGD:9068941
G Hormad1 HORMA domain containing 1 JBrowse link NW_004955413 130,214 155,381 RGD:9068941
G Mcmdc2 minichromosome maintenance domain containing 2 JBrowse link NW_004955444 12,348,537 12,382,769 RGD:9068941
G Meioc meiosis specific with coiled-coil domain JBrowse link NW_004955451 17,534,644 17,547,095 RGD:9068941
G Mlh3 mutL homolog 3 JBrowse link NW_004955523 515,409 547,257 RGD:9068941
G Rad21l1 RAD21 cohesin complex component like 1 JBrowse link NW_004955596 455,932 485,853 RGD:9068941
G Rec8 REC8 meiotic recombination protein JBrowse link NW_004955409 36,223,783 36,231,749 RGD:9068941
G Spo11 SPO11 initiator of meiotic double stranded breaks JBrowse link NW_004955445 2,088,144 2,103,385 RGD:9068941
G Syce3 synaptonemal complex central element protein 3 JBrowse link NW_004955413 33,537,646 33,573,787 RGD:9068941
G Sycp1 synaptonemal complex protein 1 JBrowse link NW_004955435 18,157,173 18,291,732 RGD:9068941
G Sycp3 synaptonemal complex protein 3 JBrowse link NW_004955405 37,093,330 37,102,789 RGD:9068941
G Syde1 synapse defective Rho GTPase homolog 1 JBrowse link NW_004955495 8,140,152 8,147,491 RGD:9068941
G Tex11 testis expressed 11 JBrowse link NW_004955475 10,057,708 10,432,087 RGD:9068941
G Tex12 testis expressed 12 JBrowse link NW_004955412 13,829,637 13,834,481 RGD:9068941
G Tex15 testis expressed 15, meiosis and synapsis associated JBrowse link NW_004955463 7,296,204 7,360,935 RGD:9068941
G Trip13 thyroid hormone receptor interactor 13 JBrowse link NW_004955504 434,187 452,636 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11825
    reproductive process 1400
      meiotic cell cycle process 170
        chromosome organization involved in meiotic cell cycle 62
          centromere detachment from spindle pole body involved in meiotic chromosome organization 0
          homologous chromosome pairing at meiosis + 45
          karyosome formation + 0
          kinetochore disassembly involved in meiotic chromosome organization 0
          linear element maturation + 0
          meiotic centromere clustering 0
          meiotic chromosome condensation 5
          meiotic chromosome decondensation 0
          meiotic sister chromatid cohesion + 7
          meiotic sister chromatid segregation + 7
          meiotic telomere clustering + 12
          meiotic telomere maintenance via semi-conservative replication 0
          premeiotic DNA replication DNA duplex unwinding 0
          synaptonemal complex assembly + 19
Path 2
Term Annotations click to browse term
  biological_process 11825
    cellular process 11033
      cellular component organization or biogenesis 4817
        cellular component organization 4737
          organelle organization 2919
            chromosome organization 841
              chromosome organization involved in meiotic cell cycle 62
                centromere detachment from spindle pole body involved in meiotic chromosome organization 0
                homologous chromosome pairing at meiosis + 45
                karyosome formation + 0
                kinetochore disassembly involved in meiotic chromosome organization 0
                linear element maturation + 0
                meiotic centromere clustering 0
                meiotic chromosome condensation 5
                meiotic chromosome decondensation 0
                meiotic sister chromatid cohesion + 7
                meiotic sister chromatid segregation + 7
                meiotic telomere clustering + 12
                meiotic telomere maintenance via semi-conservative replication 0
                premeiotic DNA replication DNA duplex unwinding 0
                synaptonemal complex assembly + 19
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.