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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome organization involved in meiotic cell cycle
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Accession:GO:0070192 term browser browse the term
Definition:A process of chromosome organization that is involved in a meiotic cell cycle.
Synonyms:exact_synonym: chromosome organisation involved in meiosis;   meiotic chromosome organization


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chromosome organization involved in meiotic cell cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 5 24,180,129 24,297,207 RGD:9068941
G ATRX ATRX chromatin remodeler JBrowse link X 59,772,067 60,107,016 RGD:13508589
G CCNE1 cyclin E1 JBrowse link 1 121,688,622 121,697,533 RGD:9068941
G CCNE2 cyclin E2 JBrowse link 29 39,534,872 39,551,141 RGD:9068941
G DMC1 DNA meiotic recombinase 1 JBrowse link 10 26,228,662 26,265,377 RGD:13508589
G MEIOC meiosis specific with coiled-coil domain JBrowse link 9 18,795,289 18,814,677 RGD:9068941
G RAD50 RAD50 double strand break repair protein JBrowse link 11 20,836,863 20,928,930 RGD:13508589
G RAD51 RAD51 recombinase JBrowse link 30 7,842,540 7,877,128 RGD:13508589
chiasma assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 9 34,804,285 34,984,640 RGD:13508589
G CCNB1IP1 cyclin B1 interacting protein 1 JBrowse link 15 17,673,065 17,701,701 RGD:13508589
G LOC102152531 synaptonemal complex protein 3-like JBrowse link X 121,060,275 121,074,166 RGD:9068941
G RNF212 ring finger protein 212 JBrowse link 3 91,453,856 91,483,674 RGD:9068941
G SYCP1 synaptonemal complex protein 1 JBrowse link 17 52,538,909 52,681,495 RGD:13508589
G TEX11 testis expressed 11 JBrowse link X 54,958,568 55,268,720 RGD:13508589
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 11 22,523,671 22,541,473 RGD:9068941
female meiosis sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC102152531 synaptonemal complex protein 3-like JBrowse link X 121,060,275 121,074,166 RGD:9068941
G RAD51C RAD51 paralog C JBrowse link 9 33,289,675 33,347,411 RGD:13508589
homologous chromosome pairing at meiosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANKRD31 ankyrin repeat domain 31 JBrowse link 3 31,067,936 31,188,066 RGD:9068941
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 9 34,804,285 34,984,640 RGD:9068941
G C8H14orf39 chromosome 8 C14orf39 homolog JBrowse link 8 35,486,476 35,542,214 RGD:13508589
G CCNE1 cyclin E1 JBrowse link 1 121,688,622 121,697,533 RGD:13508589
G CCNE2 cyclin E2 JBrowse link 29 39,534,872 39,551,141 RGD:13508589
G DMC1 DNA meiotic recombinase 1 JBrowse link 10 26,228,662 26,265,377 RGD:13508589
G FANCD2 FA complementation group D2 JBrowse link 20 8,240,270 8,297,269 RGD:13508589
G GPHA2 glycoprotein hormone subunit alpha 2 JBrowse link 18 52,211,748 52,244,591 RGD:13508589
G HORMAD1 HORMA domain containing 1 JBrowse link 17 59,860,527 59,883,031 RGD:9068941
G IHO1 interactor of HORMAD1 1 JBrowse link 20 39,964,629 40,006,726 RGD:13508589
G KASH5 KASH domain containing 5 JBrowse link 1 107,074,010 107,114,460 RGD:13508589
G LOC102152531 synaptonemal complex protein 3-like JBrowse link X 121,060,275 121,074,166 RGD:9068941
G MAEL maelstrom spermatogenic transposon silencer JBrowse link 7 31,364,111 31,394,675 RGD:13508589
G MEI4 meiotic double-stranded break formation protein 4 JBrowse link 12 38,818,983 39,024,784 RGD:13508589
G MEIOB meiosis specific with OB-fold JBrowse link 6 39,048,335 39,075,957 RGD:9068941
G MLH1 mutL homolog 1 JBrowse link 23 6,889,108 6,938,117 RGD:13508589
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 21 6,448,909 6,528,185 RGD:13508589
G MSH4 mutS homolog 4 JBrowse link 6 70,745,777 70,822,507 RGD:13508589
G MSH5 mutS homolog 5 JBrowse link 12 1,221,278 1,243,042 RGD:9068941
G NDC1 NDC1 transmembrane nucleoporin JBrowse link 5 55,161,079 55,207,969 RGD:9068941
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 24 19,741,398 19,771,675 RGD:9068941
G REC8 REC8 meiotic recombination protein JBrowse link 8 4,165,637 4,171,488 RGD:9068941
G RNF212 ring finger protein 212 JBrowse link 3 91,453,856 91,483,674 RGD:13508589
G RNF212B ring finger protein 212B JBrowse link 8 3,509,481 3,552,600 RGD:13508589
G SIRT7 sirtuin 7 JBrowse link 9 377,141 383,355 RGD:13508589
G SPATA22 spermatogenesis associated 22 JBrowse link 9 47,322,817 47,338,202 RGD:13508589
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 24 42,345,595 42,360,851 RGD:9068941
G STAG3 stromal antigen 3 JBrowse link 6 9,326,402 9,354,049 RGD:13508589
G SUN1 Sad1 and UNC84 domain containing 1 JBrowse link 6 15,996,061 16,047,788 RGD:13508589
G SYCP1 synaptonemal complex protein 1 JBrowse link 17 52,538,909 52,681,495 RGD:9068941
G TERB1 telomere repeat binding bouquet formation protein 1 JBrowse link 5 82,486,920 82,537,347 RGD:13508589
G TERB2 telomere repeat binding bouquet formation protein 2 JBrowse link 30 11,414,656 11,436,119 RGD:13508589
G TEX15 testis expressed 15, meiosis and synapsis associated JBrowse link 16 33,423,546 33,517,458 RGD:13508589
lateral element assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC102152531 synaptonemal complex protein 3-like JBrowse link X 121,060,275 121,074,166 RGD:9068941
G SYCP1 synaptonemal complex protein 1 JBrowse link 17 52,538,909 52,681,495 RGD:13508589
meiotic attachment of telomere to nuclear envelope term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GPHA2 glycoprotein hormone subunit alpha 2 JBrowse link 18 52,211,748 52,244,591 RGD:13508589
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 24 19,741,398 19,771,675 RGD:13508589
G SUN1 Sad1 and UNC84 domain containing 1 JBrowse link 6 15,996,061 16,047,788 RGD:13508589
G TERB1 telomere repeat binding bouquet formation protein 1 JBrowse link 5 82,486,920 82,537,347 RGD:13508589
G TERB2 telomere repeat binding bouquet formation protein 2 JBrowse link 30 11,414,656 11,436,119 RGD:13508589
meiotic chromosome condensation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G INCENP inner centromere protein JBrowse link 18 54,361,376 54,384,649 RGD:13508589
G MASTL microtubule associated serine/threonine kinase like JBrowse link 2 6,829,309 6,863,876 RGD:9068941
G NCAPD2 non-SMC condensin I complex subunit D2 JBrowse link 27 38,475,145 38,497,818 RGD:13508589
G NCAPD3 non-SMC condensin II complex subunit D3 JBrowse link 5 1,021,588 1,081,846 RGD:13508589
G NCAPH non-SMC condensin I complex subunit H JBrowse link 17 34,428,886 34,463,140 RGD:13508589
G NCAPH2 non-SMC condensin II complex subunit H2 JBrowse link 10 16,790,137 16,801,851 RGD:13508589
G SMC2 structural maintenance of chromosomes 2 JBrowse link 11 60,091,728 60,155,295 RGD:13508589
G SMC4 structural maintenance of chromosomes 4 JBrowse link 34 26,455,630 26,495,392 RGD:13508589
meiotic sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HORMAD1 HORMA domain containing 1 JBrowse link 17 59,860,527 59,883,031 RGD:13508589
G HORMAD2 HORMA domain containing 2 JBrowse link 26 23,254,313 23,342,644 RGD:13508589
G SGO1 shugoshin 1 JBrowse link 23 23,145,187 23,160,581 RGD:13508589
G SGO2 shugoshin 2 JBrowse link 37 9,611,843 9,653,169 RGD:13508589
meiotic sister chromatid cohesion involved in meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MEIKIN meiotic kinetochore factor JBrowse link 11 20,143,941 20,221,665 RGD:13508589
G SGO2 shugoshin 2 JBrowse link 37 9,611,843 9,653,169 RGD:9068941
meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase JBrowse link 17 35,208,989 35,252,296 RGD:13508589
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B JBrowse link 30 7,361,982 7,410,162 RGD:13508589
G MEIKIN meiotic kinetochore factor JBrowse link 11 20,143,941 20,221,665 RGD:13508589
G PPP2R1A protein phosphatase 2 scaffold subunit Aalpha JBrowse link 1 104,974,059 105,013,745 RGD:9068941
G SGO2 shugoshin 2 JBrowse link 37 9,611,843 9,653,169 RGD:13508589
meiotic telomere clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 5 24,180,129 24,297,207 RGD:13508589
G CEP63 centrosomal protein 63 JBrowse link 23 31,249,517 31,303,145 RGD:9068941
G GPHA2 glycoprotein hormone subunit alpha 2 JBrowse link 18 52,211,748 52,244,591 RGD:9068941
G MEI1 meiotic double-stranded break formation protein 1 JBrowse link 10 23,533,749 23,606,875 RGD:13508589
G MLH1 mutL homolog 1 JBrowse link 23 6,889,108 6,938,117 RGD:13508589
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 24 42,345,595 42,360,851 RGD:13508589
G TERB1 telomere repeat binding bouquet formation protein 1 JBrowse link 5 82,486,920 82,537,347 RGD:9068941
G TERB2 telomere repeat binding bouquet formation protein 2 JBrowse link 30 11,414,656 11,436,119 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 29 21,664,378 21,701,491 RGD:13508589
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 11 22,523,671 22,541,473 RGD:9068941
positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SGO2 shugoshin 2 JBrowse link 37 9,611,843 9,653,169 RGD:9068941
synaptonemal complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGO4 argonaute RISC component 4 JBrowse link 15 6,325,899 6,351,748 RGD:13508589
G BAG6 BAG cochaperone 6 JBrowse link 12 1,126,730 1,141,978 RGD:13508589
G CPEB1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 3 54,405,140 54,499,614 RGD:9068941
G EHMT2 euchromatic histone lysine methyltransferase 2 JBrowse link 12 1,341,202 1,354,602 RGD:13508589
G HORMAD1 HORMA domain containing 1 JBrowse link 17 59,860,527 59,883,031 RGD:13508589
G LOC102152531 synaptonemal complex protein 3-like JBrowse link X 121,060,275 121,074,166 RGD:9068941
G MCMDC2 minichromosome maintenance domain containing 2 JBrowse link 29 16,424,088 16,462,094 RGD:13508589
G MEIOC meiosis specific with coiled-coil domain JBrowse link 9 18,795,289 18,814,677 RGD:13508589
G MLH3 mutL homolog 3 JBrowse link 8 48,123,263 48,153,989 RGD:9068941
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 24 19,741,398 19,771,675 RGD:13508589
G REC8 REC8 meiotic recombination protein JBrowse link 8 4,165,637 4,171,488 RGD:13508589
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 24 42,345,595 42,360,851 RGD:13508589
G SYCE1 synaptonemal complex central element protein 1 JBrowse link 28 41,149,228 41,157,422 RGD:13508589
G SYCE1L synaptonemal complex central element protein 1 like JBrowse link 5 73,963,333 73,976,590 RGD:13508589
G SYCE2 synaptonemal complex central element protein 2 JBrowse link 20 49,267,985 49,285,986 RGD:13508589
G SYCE3 synaptonemal complex central element protein 3 JBrowse link 10 16,748,760 16,772,496 RGD:13508589
G SYCP1 synaptonemal complex protein 1 JBrowse link 17 52,538,909 52,681,495 RGD:9068941
G SYDE1 synapse defective Rho GTPase homolog 1 JBrowse link 20 47,021,789 47,028,606 RGD:9068941
G TEX11 testis expressed 11 JBrowse link X 54,958,568 55,268,720 RGD:13508589
G TEX12 testis expressed 12 JBrowse link 5 20,968,201 20,972,710 RGD:13508589
G TEX15 testis expressed 15, meiosis and synapsis associated JBrowse link 16 33,423,546 33,517,458 RGD:9068941
G TRIP13 thyroid hormone receptor interactor 13 JBrowse link 34 11,522,940 11,539,885 RGD:13508589

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16041
    reproductive process 1551
      meiotic cell cycle process 203
        chromosome organization involved in meiotic cell cycle 73
          centromere detachment from spindle pole body involved in meiotic chromosome organization 0
          homologous chromosome pairing at meiosis + 50
          karyosome formation + 0
          kinetochore disassembly involved in meiotic chromosome organization 0
          linear element maturation + 0
          meiotic centromere clustering 0
          meiotic chromosome condensation 8
          meiotic chromosome decondensation 0
          meiotic sister chromatid cohesion + 10
          meiotic sister chromatid segregation + 10
          meiotic telomere clustering + 12
          meiotic telomere maintenance via semi-conservative replication 0
          premeiotic DNA replication DNA duplex unwinding 0
          synaptonemal complex assembly + 22
Path 2
Term Annotations click to browse term
  biological_process 16041
    cellular process 15296
      cellular component organization or biogenesis 5949
        cellular component organization 5786
          organelle organization 3646
            chromosome organization 1082
              chromosome organization involved in meiotic cell cycle 73
                centromere detachment from spindle pole body involved in meiotic chromosome organization 0
                homologous chromosome pairing at meiosis + 50
                karyosome formation + 0
                kinetochore disassembly involved in meiotic chromosome organization 0
                linear element maturation + 0
                meiotic centromere clustering 0
                meiotic chromosome condensation 8
                meiotic chromosome decondensation 0
                meiotic sister chromatid cohesion + 10
                meiotic sister chromatid segregation + 10
                meiotic telomere clustering + 12
                meiotic telomere maintenance via semi-conservative replication 0
                premeiotic DNA replication DNA duplex unwinding 0
                synaptonemal complex assembly + 22
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.