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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome organization involved in meiotic cell cycle
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Accession:GO:0070192 term browser browse the term
Definition:A process of chromosome organization that is involved in a meiotic cell cycle.
Synonyms:exact_synonym: chromosome organisation involved in meiosis;   meiotic chromosome organization


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chromosome organization involved in meiotic cell cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:9068941
G ATRX ATRX chromatin remodeler JBrowse link X 77,504,878 77,786,235 RGD:2290271
G CCNE1 cyclin E1 JBrowse link 19 29,811,991 29,824,312 RGD:9068941
G CCNE2 cyclin E2 JBrowse link 8 94,880,224 94,896,671 RGD:9068941
G DMC1 DNA meiotic recombinase 1 JBrowse link 22 38,509,154 38,570,286 RGD:2290271
G MEIOC meiosis specific with coiled-coil domain JBrowse link 17 44,656,417 44,677,086 RGD:2290271
G RAD50 RAD50 double strand break repair protein JBrowse link 5 132,556,977 132,646,349 RGD:2290271
G RAD51 RAD51 recombinase JBrowse link 15 40,694,774 40,732,340 RGD:2290271
chiasma assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 17 61,679,139 61,864,120 RGD:2290271
G CCNB1IP1 cyclin B1 interacting protein 1 JBrowse link 14 20,311,368 20,333,312 RGD:2290271
G RNF212 ring finger protein 212 JBrowse link 4 1,056,248 1,113,794 RGD:2290271
G SYCP1 synaptonemal complex protein 1 JBrowse link 1 114,854,268 114,995,370 RGD:2290271
G SYCP3 synaptonemal complex protein 3 JBrowse link 12 101,728,648 101,739,721 RGD:9068941
G TEX11 testis expressed 11 JBrowse link X 70,511,227 70,908,711 RGD:2290271
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 134,371,569 134,392,108 RGD:2290271
female meiosis sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RAD51C RAD51 paralog C JBrowse link 17 58,692,140 58,735,611 RGD:2290271
G SYCP3 synaptonemal complex protein 3 JBrowse link 12 101,728,648 101,739,721 RGD:9068941
homologous chromosome pairing at meiosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANKRD31 ankyrin repeat domain 31 JBrowse link 5 75,068,297 75,236,922 RGD:2290271
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 17 61,679,139 61,864,120 RGD:9068941
G C14orf39 chromosome 14 open reading frame 39 JBrowse link 14 60,435,954 60,499,774 RGD:2290271
G CCNE1 cyclin E1 JBrowse link 19 29,811,991 29,824,312 RGD:2290271
G CCNE2 cyclin E2 JBrowse link 8 94,880,224 94,896,671 RGD:2290271
G DMC1 DNA meiotic recombinase 1 JBrowse link 22 38,509,154 38,570,286 RGD:2290271
G FANCD2 FA complementation group D2 JBrowse link 3 10,026,437 10,101,932 RGD:2290271
G HORMAD1 HORMA domain containing 1 JBrowse link 1 150,698,060 150,720,910 RGD:9068941
G IHO1 interactor of HORMAD1 1 JBrowse link 3 49,198,428 49,258,106 RGD:2290271
G KASH5 KASH domain containing 5 JBrowse link 19 49,388,218 49,418,002 RGD:2290271
G MAEL maelstrom spermatogenic transposon silencer JBrowse link 1 166,921,121 167,022,214 RGD:2290271
G MAJIN membrane anchored junction protein JBrowse link 11 64,938,230 64,972,108 RGD:2290271
G MEI4 meiotic double-stranded break formation protein 4 JBrowse link 6 77,650,274 77,927,045 RGD:2290271
G MEIOB meiosis specific with OB-fold JBrowse link 16 1,833,986 1,872,164 RGD:2290271
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:2290271
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 11 94,415,570 94,512,701 RGD:2290271
G MSH4 mutS homolog 4 JBrowse link 1 75,796,882 75,913,242 RGD:2290271
G MSH5 mutS homolog 5 JBrowse link 6 31,739,948 31,762,678 RGD:9068941
G NDC1 NDC1 transmembrane nucleoporin JBrowse link 1 53,765,478 53,838,296 RGD:2290271
G PRDM9 PR/SET domain 9 JBrowse link 5 23,507,155 23,528,093 RGD:2290271
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 20 1,226,040 1,255,876 RGD:9068941
G REC8 REC8 meiotic recombination protein JBrowse link 14 24,171,931 24,180,408 RGD:9068941
G RNF212 ring finger protein 212 JBrowse link 4 1,056,248 1,113,794 RGD:2290271
G RNF212B ring finger protein 212B JBrowse link 14 23,185,284 23,273,477 RGD:2290271
G SIRT7 sirtuin 7 JBrowse link 17 81,911,939 81,918,176 RGD:2290271
G SPATA22 spermatogenesis associated 22 JBrowse link 17 3,440,011 3,513,852 RGD:2290271
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 20 57,329,757 57,343,993 RGD:9068941
G STAG3 stromal antigen 3 JBrowse link 7 100,177,563 100,219,334 RGD:2290271
G SUN1 Sad1 and UNC84 domain containing 1 JBrowse link 7 815,557 874,934 RGD:2290271
G SYCP1 synaptonemal complex protein 1 JBrowse link 1 114,854,268 114,995,370 RGD:2290271
G SYCP3 synaptonemal complex protein 3 JBrowse link 12 101,728,648 101,739,721 RGD:9068941
G TERB1 telomere repeat binding bouquet formation protein 1 JBrowse link 16 66,754,410 66,801,611 RGD:2290271
G TERB2 telomere repeat binding bouquet formation protein 2 JBrowse link 15 44,956,674 44,979,229 RGD:2290271
G TEX15 testis expressed 15, meiosis and synapsis associated JBrowse link 8 30,831,544 30,913,008 RGD:2290271
lateral element assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SYCP1 synaptonemal complex protein 1 JBrowse link 1 114,854,268 114,995,370 RGD:2290271
G SYCP3 synaptonemal complex protein 3 JBrowse link 12 101,728,648 101,739,721 RGD:9068941
meiotic attachment of telomere to nuclear envelope term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MAJIN membrane anchored junction protein JBrowse link 11 64,938,230 64,972,108 RGD:2290271
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 20 1,226,040 1,255,876 RGD:2290271
G SUN1 Sad1 and UNC84 domain containing 1 JBrowse link 7 815,557 874,934 RGD:2290271
G TERB1 telomere repeat binding bouquet formation protein 1 JBrowse link 16 66,754,410 66,801,611 RGD:2290271
G TERB2 telomere repeat binding bouquet formation protein 2 JBrowse link 15 44,956,674 44,979,229 RGD:2290271
meiotic chromosome condensation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G INCENP inner centromere protein JBrowse link 11 62,123,998 62,155,474 RGD:2290271
G MASTL microtubule associated serine/threonine kinase like JBrowse link 10 27,154,479 27,187,953 RGD:9068941
G NCAPD2 non-SMC condensin I complex subunit D2 JBrowse link 12 6,494,102 6,531,955 RGD:2290271
G NCAPD3 non-SMC condensin II complex subunit D3 JBrowse link 11 134,150,113 134,225,461 RGD:2290271
G NCAPH non-SMC condensin I complex subunit H JBrowse link 2 96,335,766 96,377,091 RGD:2290271
G NCAPH2 non-SMC condensin II complex subunit H2 JBrowse link 22 50,508,216 50,524,780 RGD:2290271
G SMC2 structural maintenance of chromosomes 2 JBrowse link 9 104,093,760 104,141,419 RGD:2290271
G SMC4 structural maintenance of chromosomes 4 JBrowse link 3 160,399,638 160,434,953 RGD:2290271
meiotic sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HORMAD1 HORMA domain containing 1 JBrowse link 1 150,698,060 150,720,910 RGD:2290271
G HORMAD2 HORMA domain containing 2 JBrowse link 22 30,080,069 30,207,425 RGD:2290271
G SGO1 shugoshin 1 JBrowse link 3 20,160,593 20,188,143 RGD:2290271
G SGO2 shugoshin 2 JBrowse link 2 200,510,198 200,584,096 RGD:2290271
meiotic sister chromatid cohesion involved in meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MEIKIN meiotic kinetochore factor JBrowse link 5 131,806,990 131,945,663 RGD:2290271
G SGO2 shugoshin 2 JBrowse link 2 200,510,198 200,584,096 RGD:9068941
meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase JBrowse link 2 110,637,528 110,678,107 RGD:2290271
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B JBrowse link 15 40,161,069 40,221,123 RGD:2290271
G MEIKIN meiotic kinetochore factor JBrowse link 5 131,806,990 131,945,663 RGD:2290271
G PPP2R1A protein phosphatase 2 scaffold subunit Aalpha JBrowse link 19 52,190,052 52,229,518 RGD:2290271
G SGO2 shugoshin 2 JBrowse link 2 200,510,198 200,584,096 RGD:2290271
meiotic telomere clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:2290271
G CEP63 centrosomal protein 63 JBrowse link 3 134,485,724 134,783,169 RGD:9068941
G MAJIN membrane anchored junction protein JBrowse link 11 64,938,230 64,972,108 RGD:2290271
G MEI1 meiotic double-stranded break formation protein 1 JBrowse link 22 41,699,503 41,799,477 RGD:2290271
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:2290271
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 20 57,329,757 57,343,993 RGD:2290271
G TERB1 telomere repeat binding bouquet formation protein 1 JBrowse link 16 66,754,410 66,801,611 RGD:2290271
G TERB2 telomere repeat binding bouquet formation protein 2 JBrowse link 15 44,956,674 44,979,229 RGD:2290271
G TERF1 telomeric repeat binding factor 1 JBrowse link 8 73,008,856 73,048,123 RGD:2290271
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 5 134,371,569 134,392,108 RGD:2290271
positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SGO2 shugoshin 2 JBrowse link 2 200,510,198 200,584,096 RGD:9068941
synaptonemal complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGO4 argonaute RISC component 4 JBrowse link 1 35,807,630 35,857,890 RGD:2290271
G BAG6 BAG cochaperone 6 JBrowse link 6 31,639,028 31,660,900 RGD:2290271
G CPEB1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 15 82,543,201 82,648,795 RGD:9068941
G EHMT2 euchromatic histone lysine methyltransferase 2 JBrowse link 6 31,879,759 31,897,698 RGD:2290271
G HORMAD1 HORMA domain containing 1 JBrowse link 1 150,698,060 150,720,910 RGD:2290271
G MCMDC2 minichromosome maintenance domain containing 2 JBrowse link 8 66,870,757 66,926,436 RGD:2290271
G MEIOC meiosis specific with coiled-coil domain JBrowse link 17 44,656,417 44,677,086 RGD:2290271
G MLH3 mutL homolog 3 JBrowse link 14 75,013,764 75,051,479 RGD:2290271
G P3H4 prolyl 3-hydroxylase family member 4 (inactive) JBrowse link 17 41,801,952 41,812,710 RGD:2290271
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 20 1,226,040 1,255,876 RGD:2290271
G REC8 REC8 meiotic recombination protein JBrowse link 14 24,171,931 24,180,408 RGD:2290271
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 20 57,329,757 57,343,993 RGD:2290271
G STAG3 stromal antigen 3 JBrowse link 7 100,177,563 100,219,334 RGD:2290271
G SYCE1 synaptonemal complex central element protein 1 JBrowse link 10 133,553,900 133,568,275 RGD:2290271
G SYCE1L synaptonemal complex central element protein 1 like JBrowse link 16 77,199,408 77,213,215 RGD:2290271
G SYCE2 synaptonemal complex central element protein 2 JBrowse link 19 12,898,229 12,919,674 RGD:2290271
G SYCE3 synaptonemal complex central element protein 3 JBrowse link 22 50,551,112 50,562,919 RGD:2290271
G SYCP1 synaptonemal complex protein 1 JBrowse link 1 114,854,268 114,995,370 RGD:2290271
G SYCP2 synaptonemal complex protein 2 JBrowse link 20 59,863,277 59,933,700 RGD:2290271
G SYCP3 synaptonemal complex protein 3 JBrowse link 12 101,728,648 101,739,721 RGD:9068941
G SYDE1 synapse defective Rho GTPase homolog 1 JBrowse link 19 15,107,401 15,114,985 RGD:9068941
G TEX11 testis expressed 11 JBrowse link X 70,511,227 70,908,711 RGD:2290271
G TEX12 testis expressed 12 JBrowse link 11 112,167,372 112,172,556 RGD:2290271
G TEX15 testis expressed 15, meiosis and synapsis associated JBrowse link 8 30,831,544 30,913,008 RGD:9068941
G TRIP13 thyroid hormone receptor interactor 13 JBrowse link 5 892,884 919,348 RGD:2290271

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18539
    reproductive process 1879
      meiotic cell cycle process 222
        chromosome organization involved in meiotic cell cycle 76
          centromere detachment from spindle pole body involved in meiotic chromosome organization 0
          homologous chromosome pairing at meiosis + 53
          karyosome formation + 0
          kinetochore disassembly involved in meiotic chromosome organization 0
          linear element maturation + 0
          meiotic centromere clustering 0
          meiotic chromosome condensation 8
          meiotic chromosome decondensation 0
          meiotic sister chromatid cohesion + 10
          meiotic sister chromatid segregation + 10
          meiotic telomere clustering + 12
          meiotic telomere maintenance via semi-conservative replication 0
          premeiotic DNA replication DNA duplex unwinding 0
          synaptonemal complex assembly + 25
Path 2
Term Annotations click to browse term
  biological_process 18539
    cellular process 17550
      cellular component organization or biogenesis 7084
        cellular component organization 6893
          organelle organization 4293
            chromosome organization 1327
              chromosome organization involved in meiotic cell cycle 76
                centromere detachment from spindle pole body involved in meiotic chromosome organization 0
                homologous chromosome pairing at meiosis + 53
                karyosome formation + 0
                kinetochore disassembly involved in meiotic chromosome organization 0
                linear element maturation + 0
                meiotic centromere clustering 0
                meiotic chromosome condensation 8
                meiotic chromosome decondensation 0
                meiotic sister chromatid cohesion + 10
                meiotic sister chromatid segregation + 10
                meiotic telomere clustering + 12
                meiotic telomere maintenance via semi-conservative replication 0
                premeiotic DNA replication DNA duplex unwinding 0
                synaptonemal complex assembly + 25
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.