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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome organization involved in meiotic cell cycle
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Accession:GO:0070192 term browser browse the term
Definition:A process of chromosome organization that is involved in a meiotic cell cycle.
Synonyms:exact_synonym: chromosome organisation involved in meiosis;   meiotic chromosome organization


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chromosome organization involved in meiotic cell cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ataxia telangiectasia mutated JBrowse link 9 53,437,122 53,536,828 RGD:2290270
G Atrx ATRX, chromatin remodeler JBrowse link X 105,797,615 105,929,372 RGD:2290270
G Ccne1 cyclin E1 JBrowse link 7 38,097,984 38,107,490 RGD:2290270
G Ccne2 cyclin E2 JBrowse link 4 11,190,433 11,204,779 RGD:2290270
G Dmc1 DNA meiotic recombinase 1 JBrowse link 15 79,561,497 79,605,159 RGD:2290270
G Meioc meiosis specific with coiled-coil domain JBrowse link 11 102,665,351 102,682,240 RGD:2290270
G Rad50 RAD50 double strand break repair protein JBrowse link 11 53,649,519 53,707,319 RGD:2290270
G Rad51 RAD51 recombinase JBrowse link 2 119,112,814 119,136,073 RGD:2290270
chiasma assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 11 86,058,136 86,201,215 RGD:2290270
G Ccnb1ip1 cyclin B1 interacting protein 1 JBrowse link 14 50,789,249 50,795,728 RGD:2290270
G Rnf212 ring finger protein 212 JBrowse link 5 108,728,105 108,775,067 RGD:2290270
G Sycp1 synaptonemal complex protein 1 JBrowse link 3 102,818,499 102,936,100 RGD:2290270
G Sycp3 synaptonemal complex protein 3 JBrowse link 10 88,459,587 88,473,236 RGD:2290270
G Tex11 testis expressed gene 11 JBrowse link X 100,838,648 101,059,639 RGD:2290270
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 11 51,985,138 52,004,145 RGD:2290270
female meiosis sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rad51c RAD51 paralog C JBrowse link 11 87,376,645 87,404,954 RGD:2290270
G Stag3 stromal antigen 3 JBrowse link 5 138,272,514 138,312,397 RGD:2290270
G Sycp3 synaptonemal complex protein 3 JBrowse link 10 88,459,587 88,473,236 RGD:2290270
homologous chromosome pairing at meiosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G 4930447C04Rik RIKEN cDNA 4930447C04 gene JBrowse link 12 72,880,193 72,917,957 RGD:2290270
G Ankrd31 ankyrin repeat domain 31 JBrowse link 13 96,748,289 96,909,794 RGD:2290270
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 11 86,058,136 86,201,215 RGD:2290270
G Ccne1 cyclin E1 JBrowse link 7 38,097,984 38,107,490 RGD:2290270
G Ccne2 cyclin E2 JBrowse link 4 11,190,433 11,204,779 RGD:2290270
G Dmc1 DNA meiotic recombinase 1 JBrowse link 15 79,561,497 79,605,159 RGD:2290270
G Fancd2 Fanconi anemia, complementation group D2 JBrowse link 6 113,531,640 113,597,020 RGD:2290270
G Hormad1 HORMA domain containing 1 JBrowse link 3 95,559,677 95,587,863 RGD:2290270
G Iho1 interactor of HORMAD1 1 JBrowse link 9 108,403,492 108,431,841 RGD:2290270
G Kash5 KASH domain containing 5 JBrowse link 7 45,183,619 45,204,919 RGD:2290270
G Mael maelstrom spermatogenic transposon silencer JBrowse link 1 166,201,385 166,238,744 RGD:2290270
G Majin membrane anchored junction protein JBrowse link 19 6,184,345 6,224,230 RGD:2290270
G Mei4 meiotic double-stranded break formation protein 4 JBrowse link 9 81,863,670 82,206,007 RGD:2290270
G Meiob meiosis specific with OB domains JBrowse link 17 24,804,301 24,839,788 RGD:2290270
G Mlh1 mutL homolog 1 JBrowse link 9 111,228,228 111,271,786 RGD:2290270
G Morc2b microrchidia 2B JBrowse link 17 33,135,588 33,150,499 RGD:2290270
G Mre11a MRE11A homolog A, double strand break repair nuclease JBrowse link 9 14,784,654 14,837,125 RGD:2290270
G Msh4 mutS homolog 4 JBrowse link 3 153,857,141 153,906,138 RGD:2290270
G Msh5 mutS homolog 5 JBrowse link 17 35,028,605 35,046,997 RGD:2290270
G Ndc1 NDC1 transmembrane nucleoporin JBrowse link 4 107,368,047 107,416,346 RGD:2290270
G Prdm9 PR domain containing 9 JBrowse link 17 15,543,072 15,564,374 RGD:2290270
G Rad21l RAD21-like (S. pombe) JBrowse link 2 151,644,366 151,670,622 RGD:2290270
G Rec8 REC8 meiotic recombination protein JBrowse link 14 55,618,002 55,625,395 RGD:2290270
G Rnf212 ring finger protein 212 JBrowse link 5 108,728,105 108,775,067 RGD:2290270
G Sirt7 sirtuin 7 JBrowse link 11 120,618,371 120,625,014 RGD:2290270
G Spata22 spermatogenesis associated 22 JBrowse link 11 73,326,560 73,346,592 RGD:2290270
G Spo11 SPO11 meiotic protein covalently bound to DSB JBrowse link 2 172,977,379 172,993,576 RGD:2290270
G Stag3 stromal antigen 3 JBrowse link 5 138,272,514 138,312,397 RGD:2290270
G Sun1 Sad1 and UNC84 domain containing 1 JBrowse link 5 139,200,564 139,249,839 RGD:2290270
G Sycp1 synaptonemal complex protein 1 JBrowse link 3 102,818,499 102,936,100 RGD:2290270
G Sycp3 synaptonemal complex protein 3 JBrowse link 10 88,459,587 88,473,236 RGD:2290270
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link 8 104,446,718 104,509,887 RGD:2290270
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link 2 122,186,272 122,206,393 RGD:2290270
G Tex15 testis expressed gene 15 JBrowse link 8 33,516,689 33,592,503 RGD:2290270
G Tex19.1 testis expressed gene 19.1 JBrowse link 11 121,146,143 121,148,314 RGD:2290270
lateral element assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sycp1 synaptonemal complex protein 1 JBrowse link 3 102,818,499 102,936,100 RGD:2290270
G Sycp3 synaptonemal complex protein 3 JBrowse link 10 88,459,587 88,473,236 RGD:2290270
male meiosis sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Stag3 stromal antigen 3 JBrowse link 5 138,272,514 138,312,397 RGD:2290270
meiotic attachment of telomere to nuclear envelope term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Majin membrane anchored junction protein JBrowse link 19 6,184,345 6,224,230 RGD:2290270
G Rad21l RAD21-like (S. pombe) JBrowse link 2 151,644,366 151,670,622 RGD:2290270
G Sun1 Sad1 and UNC84 domain containing 1 JBrowse link 5 139,200,564 139,249,839 RGD:2290270
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link 8 104,446,718 104,509,887 RGD:2290270
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link 2 122,186,272 122,206,393 RGD:2290270
meiotic chromosome condensation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Incenp inner centromere protein JBrowse link 19 9,872,295 9,899,489 RGD:2290270
G Mastl microtubule associated serine/threonine kinase-like JBrowse link 2 23,116,539 23,156,024 RGD:9068941
G Ncapd2 non-SMC condensin I complex, subunit D2 JBrowse link 6 125,168,007 125,192,100 RGD:2290270
G Ncapd3 non-SMC condensin II complex, subunit D3 JBrowse link 9 27,030,165 27,096,522 RGD:2290270
G Ncaph non-SMC condensin I complex, subunit H JBrowse link 2 127,103,809 127,133,954 RGD:2290270
G Ncaph2 non-SMC condensin II complex, subunit H2 JBrowse link 15 89,355,719 89,372,850 RGD:2290270
G Smc2 structural maintenance of chromosomes 2 JBrowse link 4 52,439,221 52,488,365 RGD:2290270
G Smc4 structural maintenance of chromosomes 4 JBrowse link 3 69,004,738 69,034,623 RGD:2290270
meiotic sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hormad1 HORMA domain containing 1 JBrowse link 3 95,559,677 95,587,863 RGD:2290270
G Hormad2 HORMA domain containing 2 JBrowse link 11 4,345,801 4,441,198 RGD:2290270
G Sgo1 shugoshin 1 JBrowse link 17 53,674,786 53,691,331 RGD:2290270
G Sgo2a shugoshin 2A JBrowse link 1 57,985,340 58,026,277 RGD:2290270
G Sgo2b shugoshin 2B JBrowse link 8 63,924,694 63,952,170 RGD:2290270
meiotic sister chromatid cohesion involved in meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Meikin meiotic kinetochore factor JBrowse link 11 54,370,652 54,426,790 RGD:2290270
G Sgo2a shugoshin 2A JBrowse link 1 57,985,340 58,026,277 RGD:2290270
meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bub1 BUB1, mitotic checkpoint serine/threonine kinase JBrowse link 2 127,800,197 127,831,859 RGD:2290270
G Bub1b BUB1B, mitotic checkpoint serine/threonine kinase JBrowse link 2 118,598,202 118,641,592 RGD:2290270
G Meikin meiotic kinetochore factor JBrowse link 11 54,370,652 54,426,790 RGD:2290270
G Ppp2r1a protein phosphatase 2, regulatory subunit A, alpha JBrowse link 17 20,945,454 20,965,905 RGD:2290270
G Sgo2a shugoshin 2A JBrowse link 1 57,985,340 58,026,277 RGD:2290270
meiotic telomere clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ataxia telangiectasia mutated JBrowse link 9 53,437,122 53,536,828 RGD:2290270
G Cep63 centrosomal protein 63 JBrowse link 9 102,586,578 102,626,564 RGD:2290270
G Majin membrane anchored junction protein JBrowse link 19 6,184,345 6,224,230 RGD:2290270
G Mei1 meiotic double-stranded break formation protein 1 JBrowse link 15 82,070,074 82,126,817 RGD:2290270
G Mlh1 mutL homolog 1 JBrowse link 9 111,228,228 111,271,786 RGD:2290270
G Spo11 SPO11 meiotic protein covalently bound to DSB JBrowse link 2 172,977,379 172,993,576 RGD:2290270
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link 8 104,446,718 104,509,887 RGD:2290270
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link 2 122,186,272 122,206,393 RGD:2290270
G Terf1 telomeric repeat binding factor 1 JBrowse link 1 15,805,546 15,844,052 RGD:2290270
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 11 51,985,138 52,004,145 RGD:2290270
positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sgo2a shugoshin 2A JBrowse link 1 57,985,340 58,026,277 RGD:2290270
synaptonemal complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ago4 argonaute RISC catalytic subunit 4 JBrowse link 4 126,489,487 126,533,586 RGD:2290270
G Bag6 BCL2-associated athanogene 6 JBrowse link 17 35,135,156 35,147,321 RGD:2290270
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 7 81,347,026 81,458,001 RGD:2290270
G Ehmt2 euchromatic histone lysine N-methyltransferase 2 JBrowse link 17 34,898,463 34,914,073 RGD:2290270
G Hormad1 HORMA domain containing 1 JBrowse link 3 95,559,677 95,587,863 RGD:2290270
G Mcmdc2 minichromosome maintenance domain containing 2 JBrowse link 1 9,906,157 9,943,606 RGD:2290270
G Meioc meiosis specific with coiled-coil domain JBrowse link 11 102,665,351 102,682,240 RGD:2290270
G Mlh3 mutL homolog 3 JBrowse link 12 85,234,466 85,270,647 RGD:2290270
G Rad21l RAD21-like (S. pombe) JBrowse link 2 151,644,366 151,670,622 RGD:2290270
G Rec8 REC8 meiotic recombination protein JBrowse link 14 55,618,002 55,625,395 RGD:2290270
G Spo11 SPO11 meiotic protein covalently bound to DSB JBrowse link 2 172,977,379 172,993,576 RGD:2290270
G Syce1 synaptonemal complex central element protein 1 JBrowse link 7 140,777,229 140,787,854 RGD:2290270
G Syce1l synaptonemal complex central element protein 1 like JBrowse link 8 113,643,213 113,655,533 RGD:2290270
G Syce2 synaptonemal complex central element protein 2 JBrowse link 8 84,872,111 84,887,446 RGD:2290270
G Syce3 synaptonemal complex central element protein 3 JBrowse link 15 89,390,174 89,410,503 RGD:2290270
G Sycp1 synaptonemal complex protein 1 JBrowse link 3 102,818,499 102,936,100 RGD:2290270
G Sycp3 synaptonemal complex protein 3 JBrowse link 10 88,459,587 88,473,236 RGD:2290270
G Syde1 synapse defective 1, Rho GTPase, homolog 1 (C. elegans) JBrowse link 10 78,584,502 78,591,964 RGD:2290270
G Tex11 testis expressed gene 11 JBrowse link X 100,838,648 101,059,639 RGD:2290270
G Tex12 testis expressed 12 JBrowse link 9 50,557,148 50,561,268 RGD:2290270
G Tex15 testis expressed gene 15 JBrowse link 8 33,516,689 33,592,503 RGD:2290270
G Trip13 thyroid hormone receptor interactor 13 JBrowse link 13 73,912,450 73,937,795 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23163
    reproductive process 1863
      meiotic cell cycle process 215
        chromosome organization involved in meiotic cell cycle 76
          centromere detachment from spindle pole body involved in meiotic chromosome organization 0
          homologous chromosome pairing at meiosis + 52
          karyosome formation + 0
          kinetochore disassembly involved in meiotic chromosome organization 0
          linear element maturation + 0
          meiotic centromere clustering 0
          meiotic chromosome condensation 8
          meiotic chromosome decondensation 0
          meiotic sister chromatid cohesion + 12
          meiotic sister chromatid segregation + 12
          meiotic telomere clustering + 12
          meiotic telomere maintenance via semi-conservative replication 0
          premeiotic DNA replication DNA duplex unwinding 0
          synaptonemal complex assembly + 22
Path 2
Term Annotations click to browse term
  biological_process 23163
    cellular process 17053
      cellular component organization or biogenesis 6347
        cellular component organization 6159
          organelle organization 3797
            chromosome organization 1168
              chromosome organization involved in meiotic cell cycle 76
                centromere detachment from spindle pole body involved in meiotic chromosome organization 0
                homologous chromosome pairing at meiosis + 52
                karyosome formation + 0
                kinetochore disassembly involved in meiotic chromosome organization 0
                linear element maturation + 0
                meiotic centromere clustering 0
                meiotic chromosome condensation 8
                meiotic chromosome decondensation 0
                meiotic sister chromatid cohesion + 12
                meiotic sister chromatid segregation + 12
                meiotic telomere clustering + 12
                meiotic telomere maintenance via semi-conservative replication 0
                premeiotic DNA replication DNA duplex unwinding 0
                synaptonemal complex assembly + 22
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.