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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome organization involved in meiotic cell cycle
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Accession:GO:0070192 term browser browse the term
Definition:A process of chromosome organization that is involved in a meiotic cell cycle.
Synonyms:exact_synonym: chromosome organisation involved in meiosis;   meiotic chromosome organization


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chromosome organization involved in meiotic cell cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 9 36,620,656 36,759,555 RGD:9068941
G ATRX ATRX chromatin remodeler JBrowse link X 61,584,028 61,872,341 RGD:14298760
G CCNE1 cyclin E1 JBrowse link 6 39,919,541 39,933,224 RGD:9068941
G CCNE2 cyclin E2 JBrowse link 4 41,802,090 41,821,870 RGD:9068941
G DMC1 DNA meiotic recombinase 1 JBrowse link 5 9,431,236 9,470,333 RGD:14298760
G MEIOC meiosis specific with coiled-coil domain JBrowse link 12 18,652,582 18,663,227 RGD:9068941
G RAD50 RAD50 double strand break repair protein JBrowse link 2 134,844,460 134,939,188 RGD:14298760
G RAD51 RAD51 recombinase JBrowse link 1 130,592,414 130,640,326 RGD:14298760
chiasma assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 12 36,498,138 36,639,847 RGD:14298760
G CCNB1IP1 cyclin B1 interacting protein 1 JBrowse link 7 78,553,680 78,576,057 RGD:14298760
G RNF212 ring finger protein 212 JBrowse link 8 393,707 413,952 RGD:9068941
G SYCP1 synaptonemal complex protein 1 JBrowse link 4 105,592,354 105,730,413 RGD:14298760
G SYCP3 synaptonemal complex protein 3 JBrowse link 5 82,492,744 82,501,068 RGD:9068941
G TEX11 testis expressed 11 JBrowse link X 56,543,933 56,925,104 RGD:14298760
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 2 136,652,764 136,667,213 RGD:14298760
female meiosis sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RAD51C RAD51 paralog C JBrowse link 12 34,975,949 35,018,112 RGD:14298760
G SYCP3 synaptonemal complex protein 3 JBrowse link 5 82,492,744 82,501,068 RGD:9068941
homologous chromosome pairing at meiosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANKRD31 ankyrin repeat domain 31 JBrowse link 2 84,148,363 84,320,823 RGD:9068941
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 12 36,498,138 36,639,847 RGD:9068941
G C1H14orf39 chromosome 1 C14orf39 homolog JBrowse link 1 189,330,137 189,471,874 RGD:14298760
G CCNE1 cyclin E1 JBrowse link 6 39,919,541 39,933,224 RGD:14298760
G CCNE2 cyclin E2 JBrowse link 4 41,802,090 41,821,870 RGD:14298760
G DMC1 DNA meiotic recombinase 1 JBrowse link 5 9,431,236 9,470,333 RGD:14298760
G FANCD2 FA complementation group D2 JBrowse link 13 66,241,951 66,308,601 RGD:14298760
G HORMAD1 HORMA domain containing 1 JBrowse link 4 98,447,298 98,469,650 RGD:9068941
G IHO1 interactor of HORMAD1 1 JBrowse link 13 31,802,963 31,836,911 RGD:14298760
G KASH5 KASH domain containing 5 JBrowse link 6 54,476,989 54,501,099 RGD:14298760
G MAEL maelstrom spermatogenic transposon silencer JBrowse link 4 83,990,266 84,040,465 RGD:14298760
G MAJIN membrane anchored junction protein JBrowse link 2 7,209,376 7,244,400 RGD:9068941
G MEI4 meiotic double-stranded break formation protein 4 JBrowse link 1 88,188,920 88,399,072 RGD:14298760
G MEIOB meiosis specific with OB-fold JBrowse link 3 40,092,689 40,133,173 RGD:14298760
G MLH1 mutL homolog 1 JBrowse link 13 21,791,276 21,877,789 RGD:14298760
G MRE11 MRE11 homolog, double strand break repair nuclease JBrowse link 9 26,572,352 26,634,596 RGD:14298760
G MSH4 mutS homolog 4 JBrowse link 6 137,410,820 137,524,459 RGD:14298760
G MSH5 mutS homolog 5 JBrowse link 7 23,852,864 23,872,760 RGD:9068941
G NDC1 NDC1 transmembrane nucleoporin JBrowse link 6 158,458,597 158,515,057 RGD:9068941
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 17 34,035,526 34,064,215 RGD:9068941
G REC8 REC8 meiotic recombination protein JBrowse link 7 75,118,743 75,127,759 RGD:9068941
G RNF212B ring finger protein 212B JBrowse link 7 75,798,895 75,831,455 RGD:14298760
G SIRT7 sirtuin 7 JBrowse link 12 1,078,155 1,084,112 RGD:14298760
G SPATA22 spermatogenesis associated 22 JBrowse link 12 49,573,050 49,609,232 RGD:14298760
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 17 57,730,676 57,745,875 RGD:9068941
G STAG3 stromal antigen 3 JBrowse link 3 8,175,908 8,211,898 RGD:14298760
G SUN1 Sad1 and UNC84 domain containing 1 JBrowse link 3 485,980 532,974 RGD:14298760
G SYCP1 synaptonemal complex protein 1 JBrowse link 4 105,592,354 105,730,413 RGD:9068941
G SYCP3 synaptonemal complex protein 3 JBrowse link 5 82,492,744 82,501,068 RGD:9068941
G TERB1 telomere repeat binding bouquet formation protein 1 JBrowse link 6 27,450,923 27,509,969 RGD:14298760
G TERB2 telomere repeat binding bouquet formation protein 2 JBrowse link 1 126,738,520 126,767,948 RGD:14298760
G TEX15 testis expressed 15, meiosis and synapsis associated JBrowse link 15 54,210,139 54,277,609 RGD:9068941
lateral element assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SYCP1 synaptonemal complex protein 1 JBrowse link 4 105,592,354 105,730,413 RGD:14298760
G SYCP3 synaptonemal complex protein 3 JBrowse link 5 82,492,744 82,501,068 RGD:9068941
meiotic attachment of telomere to nuclear envelope term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MAJIN membrane anchored junction protein JBrowse link 2 7,209,376 7,244,400 RGD:9068941
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 17 34,035,526 34,064,215 RGD:9068941
G SUN1 Sad1 and UNC84 domain containing 1 JBrowse link 3 485,980 532,974 RGD:14298760
G TERB1 telomere repeat binding bouquet formation protein 1 JBrowse link 6 27,450,923 27,509,969 RGD:14298760
G TERB2 telomere repeat binding bouquet formation protein 2 JBrowse link 1 126,738,520 126,767,948 RGD:14298760
meiotic chromosome condensation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G INCENP inner centromere protein JBrowse link 2 9,411,942 9,445,825 RGD:14298760
G MASTL microtubule associated serine/threonine kinase like JBrowse link 10 48,855,895 48,877,504 RGD:14298760
G NCAPD2 non-SMC condensin I complex subunit D2 JBrowse link 5 64,136,505 64,167,410 RGD:14298760
G NCAPD3 non-SMC condensin II complex subunit D3 JBrowse link 9 60,712,416 60,785,907 RGD:14298760
G NCAPH non-SMC condensin I complex subunit H JBrowse link 3 46,852,388 46,893,008 RGD:14298760
G NCAPH2 non-SMC condensin II complex subunit H2 JBrowse link 5 222,784 233,491 RGD:14298760
G SMC2 structural maintenance of chromosomes 2 JBrowse link 1 245,409,559 245,459,032 RGD:14298760
G SMC4 structural maintenance of chromosomes 4 JBrowse link 13 100,078,149 100,120,907 RGD:14298760
meiotic sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HORMAD1 HORMA domain containing 1 JBrowse link 4 98,447,298 98,469,650 RGD:14298760
G HORMAD2 HORMA domain containing 2 RGD:14298760
G SGO1 shugoshin 1 JBrowse link 13 7,137,891 7,153,202 RGD:14298760
G SGO2 shugoshin 2 JBrowse link 15 104,099,378 104,150,723 RGD:14298760
meiotic sister chromatid cohesion involved in meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MEIKIN meiotic kinetochore factor JBrowse link 2 134,103,568 134,208,250 RGD:14298760
G SGO2 shugoshin 2 JBrowse link 15 104,099,378 104,150,723 RGD:9068941
meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BUB1 BUB1 mitotic checkpoint serine/threonine kinase JBrowse link 3 45,585,188 45,623,240 RGD:14298760
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B JBrowse link 1 131,093,026 131,143,840 RGD:14298760
G MEIKIN meiotic kinetochore factor JBrowse link 2 134,103,568 134,208,250 RGD:14298760
G PPP2R1A protein phosphatase 2 scaffold subunit Aalpha JBrowse link 6 57,929,520 57,964,948 RGD:14298760
G SGO2 shugoshin 2 JBrowse link 15 104,099,378 104,150,723 RGD:14298760
meiotic telomere clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 9 36,620,656 36,759,555 RGD:14298760
G CEP63 centrosomal protein 63 JBrowse link 13 75,605,622 75,707,087 RGD:9068941
G MAJIN membrane anchored junction protein JBrowse link 2 7,209,376 7,244,400 RGD:9068941
G MEI1 meiotic double-stranded break formation protein 1 JBrowse link 5 6,785,957 6,870,599 RGD:14298760
G MLH1 mutL homolog 1 JBrowse link 13 21,791,276 21,877,789 RGD:14298760
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 17 57,730,676 57,745,875 RGD:14298760
G TERB1 telomere repeat binding bouquet formation protein 1 JBrowse link 6 27,450,923 27,509,969 RGD:9068941
G TERB2 telomere repeat binding bouquet formation protein 2 JBrowse link 1 126,738,520 126,767,948 RGD:9068941
G TERF1 telomeric repeat binding factor 1 JBrowse link 4 62,797,244 62,831,459 RGD:14298760
G UBE2B ubiquitin conjugating enzyme E2 B JBrowse link 2 136,652,764 136,667,213 RGD:14298760
positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SGO2 shugoshin 2 JBrowse link 15 104,099,378 104,150,723 RGD:9068941
synaptonemal complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACYP1 acylphosphatase 1 JBrowse link 7 98,220,318 98,265,187 RGD:14298760
G AGO4 argonaute RISC component 4 JBrowse link 6 91,967,499 92,013,030 RGD:14298760
G BAG6 BAG cochaperone 6 JBrowse link 7 23,756,897 23,768,659 RGD:14298760
G CPEB1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 7 52,329,054 52,382,408 RGD:9068941
G EHMT2 euchromatic histone lysine methyltransferase 2 JBrowse link 7 23,977,683 23,992,673 RGD:14298760
G HORMAD1 HORMA domain containing 1 JBrowse link 4 98,447,298 98,469,650 RGD:14298760
G MCMDC2 minichromosome maintenance domain containing 2 JBrowse link 4 67,850,585 67,892,438 RGD:14298760
G MEIOC meiosis specific with coiled-coil domain JBrowse link 12 18,652,582 18,663,227 RGD:14298760
G RAD21L1 RAD21 cohesin complex component like 1 JBrowse link 17 34,035,526 34,064,215 RGD:9068941
G REC8 REC8 meiotic recombination protein JBrowse link 7 75,118,743 75,127,759 RGD:14298760
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 17 57,730,676 57,745,875 RGD:14298760
G SYCE1 synaptonemal complex central element protein 1 JBrowse link 14 141,726,708 141,737,830 RGD:14298760
G SYCE2 synaptonemal complex central element protein 2 JBrowse link 2 66,118,439 66,133,454 RGD:14298760
G SYCE3 synaptonemal complex central element protein 3 JBrowse link 5 168,908 201,037 RGD:14298760
G SYCP1 synaptonemal complex protein 1 JBrowse link 4 105,592,354 105,730,413 RGD:14298760
G SYCP3 synaptonemal complex protein 3 JBrowse link 5 82,492,744 82,501,068 RGD:9068941
G SYDE1 synapse defective Rho GTPase homolog 1 JBrowse link 2 62,447,030 62,453,944 RGD:9068941
G TEX11 testis expressed 11 JBrowse link X 56,543,933 56,925,104 RGD:14298760
G TEX12 testis expressed 12 JBrowse link 9 39,864,093 39,869,572 RGD:14298760
G TEX15 testis expressed 15, meiosis and synapsis associated JBrowse link 15 54,210,139 54,277,609 RGD:9068941
G TRIP13 thyroid hormone receptor interactor 13 JBrowse link 16 79,458,843 79,473,705 RGD:14298760

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16411
    reproductive process 1584
      meiotic cell cycle process 205
        chromosome organization involved in meiotic cell cycle 72
          centromere detachment from spindle pole body involved in meiotic chromosome organization 0
          homologous chromosome pairing at meiosis + 49
          karyosome formation + 0
          kinetochore disassembly involved in meiotic chromosome organization 0
          linear element maturation + 0
          meiotic centromere clustering 0
          meiotic chromosome condensation 8
          meiotic chromosome decondensation 0
          meiotic sister chromatid cohesion + 10
          meiotic sister chromatid segregation + 10
          meiotic telomere clustering + 12
          meiotic telomere maintenance via semi-conservative replication 0
          premeiotic DNA replication DNA duplex unwinding 0
          synaptonemal complex assembly + 21
Path 2
Term Annotations click to browse term
  biological_process 16411
    cellular process 15624
      cellular component organization or biogenesis 5902
        cellular component organization 5740
          organelle organization 3604
            chromosome organization 1067
              chromosome organization involved in meiotic cell cycle 72
                centromere detachment from spindle pole body involved in meiotic chromosome organization 0
                homologous chromosome pairing at meiosis + 49
                karyosome formation + 0
                kinetochore disassembly involved in meiotic chromosome organization 0
                linear element maturation + 0
                meiotic centromere clustering 0
                meiotic chromosome condensation 8
                meiotic chromosome decondensation 0
                meiotic sister chromatid cohesion + 10
                meiotic sister chromatid segregation + 10
                meiotic telomere clustering + 12
                meiotic telomere maintenance via semi-conservative replication 0
                premeiotic DNA replication DNA duplex unwinding 0
                synaptonemal complex assembly + 21
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.