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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome organization involved in meiotic cell cycle
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Accession:GO:0070192 term browser browse the term
Definition:A process of chromosome organization that is involved in a meiotic cell cycle.
Synonyms:exact_synonym: chromosome organisation involved in meiosis;   meiotic chromosome organization


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chromosome organization involved in meiotic cell cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link NW_004936551 359,134 534,672 RGD:9068941
G Atrx ATRX chromatin remodeler JBrowse link NW_004936683 2,496,307 2,718,539 RGD:9068941
G Ccne1 cyclin E1 JBrowse link NW_004936570 5,536,817 5,547,880 RGD:9068941
G Ccne2 cyclin E2 JBrowse link NW_004936544 7,839,730 7,852,251 RGD:9068941
G Meioc meiosis specific with coiled-coil domain JBrowse link NW_004936541 1,064,702 1,066,742 RGD:9068941
G Rad50 RAD50 double strand break repair protein JBrowse link NW_004936647 2,546,100 2,637,524 RGD:9068941
G Rad51 RAD51 recombinase JBrowse link NW_004936471 4,119,020 4,136,811 RGD:9068941
chiasma assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link NW_004936490 3,001,445 3,139,538 RGD:9068941
G Ccnb1ip1 cyclin B1 interacting protein 1 JBrowse link NW_004936877 523,022 528,387 RGD:9068941
G Rnf212 ring finger protein 212 JBrowse link NW_004936477 22,122,854 22,173,324 RGD:9068941
G Sycp1 synaptonemal complex protein 1 JBrowse link NW_004936627 239,232 365,062 RGD:9068941
G Sycp3 synaptonemal complex protein 3 JBrowse link NW_004936492 12,316,868 12,326,778 RGD:9068941
G Tex11 testis expressed 11 JBrowse link NW_004936762 681,962 969,749 RGD:9068941
G Ube2b ubiquitin conjugating enzyme E2 B JBrowse link NW_004936647 891,357 913,963 RGD:9068941
female meiosis sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rad51c RAD51 paralog C JBrowse link NW_004936490 4,440,638 4,473,301 RGD:9068941
G Sycp3 synaptonemal complex protein 3 JBrowse link NW_004936492 12,316,868 12,326,778 RGD:9068941
homologous chromosome pairing at meiosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd31 ankyrin repeat domain 31 JBrowse link NW_004936549 1,450,490 1,612,151 RGD:9068941
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link NW_004936490 3,001,445 3,139,538 RGD:9068941
G Ccne1 cyclin E1 JBrowse link NW_004936570 5,536,817 5,547,880 RGD:9068941
G Ccne2 cyclin E2 JBrowse link NW_004936544 7,839,730 7,852,251 RGD:9068941
G CUNH14orf39 chromosome unknown C14orf39 homolog JBrowse link NW_004936495 4,660,616 4,695,338 RGD:9068941
G Dmc1 DNA meiotic recombinase 1 JBrowse link NW_004936492 2,754,694 2,788,249 RGD:9068941
G Fancd2 FA complementation group D2 JBrowse link NW_004936602 3,162,177 3,220,468 RGD:9068941
G Hormad1 HORMA domain containing 1 JBrowse link NW_004936580 933,123 956,201 RGD:9068941
G Iho1 interactor of HORMAD1 1 JBrowse link NW_004936529 905,692 929,896 RGD:9068941
G Kash5 KASH domain containing 5 JBrowse link NW_004936664 3,268,824 3,300,689 RGD:9068941
G LOC101964224 heparan sulfate glucosamine 3-O-sulfotransferase 6 JBrowse link NW_004936694 2,099,967 2,176,279 RGD:9068941
G Mael maelstrom spermatogenic transposon silencer JBrowse link NW_004936481 18,903,153 18,928,195 RGD:9068941
G Majin membrane anchored junction protein JBrowse link NW_004936599 4,382,751 4,400,400 RGD:9068941
G Mei4 meiotic double-stranded break formation protein 4 JBrowse link NW_004936510 12,063,763 12,208,789 RGD:9068941
G Mlh1 mutL homolog 1 JBrowse link NW_004936473 26,556,636 26,600,830 RGD:9068941
G Mre11 MRE11 homolog, double strand break repair nuclease JBrowse link NW_004936674 466,495 528,072 RGD:9068941
G Msh4 mutS homolog 4 JBrowse link NW_004936571 2,827,283 2,898,562 RGD:9068941
G Msh5 mutS homolog 5 JBrowse link NW_004936727 1,776,038 1,794,152 RGD:9068941
G Ndc1 NDC1 transmembrane nucleoporin JBrowse link NW_004936522 7,303,366 7,353,700 RGD:9068941
G Rad21l1 RAD21 cohesin complex component like 1 JBrowse link NW_004936485 17,413,006 17,435,951 RGD:9068941
G Rec8 REC8 meiotic recombination protein JBrowse link NW_004936722 369,366 375,243 RGD:9068941
G Sirt7 sirtuin 7 JBrowse link NW_004936594 5,418,331 5,425,050 RGD:9068941
G Spata22 spermatogenesis associated 22 JBrowse link NW_004936677 167,324 197,860 RGD:9068941
G Spo11 SPO11 initiator of meiotic double stranded breaks JBrowse link NW_004936530 183,271 197,549 RGD:9068941
G Stag3 stromal antigen 3 JBrowse link NW_004936543 430,804 458,112 RGD:9068941
G Sun1 Sad1 and UNC84 domain containing 1 JBrowse link NW_004936754 1,067,900 1,111,568 RGD:9068941
G Sycp1 synaptonemal complex protein 1 JBrowse link NW_004936627 239,232 365,062 RGD:9068941
G Sycp3 synaptonemal complex protein 3 JBrowse link NW_004936492 12,316,868 12,326,778 RGD:9068941
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link NW_004936475 17,038,956 17,077,887 RGD:9068941
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link NW_004936471 7,713,562 7,728,720 RGD:9068941
G Tex15 testis expressed 15, meiosis and synapsis associated JBrowse link NW_004936792 668,290 727,197 RGD:9068941
lateral element assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sycp1 synaptonemal complex protein 1 JBrowse link NW_004936627 239,232 365,062 RGD:9068941
G Sycp3 synaptonemal complex protein 3 JBrowse link NW_004936492 12,316,868 12,326,778 RGD:9068941
meiotic attachment of telomere to nuclear envelope term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Majin membrane anchored junction protein JBrowse link NW_004936599 4,382,751 4,400,400 RGD:9068941
G Rad21l1 RAD21 cohesin complex component like 1 JBrowse link NW_004936485 17,413,006 17,435,951 RGD:9068941
G Sun1 Sad1 and UNC84 domain containing 1 JBrowse link NW_004936754 1,067,900 1,111,568 RGD:9068941
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link NW_004936475 17,038,956 17,077,887 RGD:9068941
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link NW_004936471 7,713,562 7,728,720 RGD:9068941
meiotic chromosome condensation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mastl microtubule associated serine/threonine kinase like JBrowse link NW_004936484 2,276,463 2,306,119 RGD:9068941
G Ncaph non-SMC condensin I complex subunit H JBrowse link NW_004936744 440,958 468,964 RGD:9068941
G Ncaph2 non-SMC condensin II complex subunit H2 JBrowse link NW_004936629 320,885 327,290 RGD:9068941
G Smc2 structural maintenance of chromosomes 2 JBrowse link NW_004936793 909,663 958,883 RGD:9068941
G Smc4 structural maintenance of chromosomes 4 JBrowse link NW_004936708 362,605 395,217 RGD:9068941
meiotic sister chromatid cohesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hormad1 HORMA domain containing 1 JBrowse link NW_004936580 933,123 956,201 RGD:9068941
G Hormad2 HORMA domain containing 2 JBrowse link NW_004936904 477,398 546,574 RGD:9068941
meiotic sister chromatid cohesion involved in meiosis I term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Meikin meiotic kinetochore factor JBrowse link NW_004936647 3,218,383 3,270,571 RGD:9068941
G Sgo2 shugoshin 2 JBrowse link NW_004936825 350,390 373,005 RGD:9068941
meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Meikin meiotic kinetochore factor JBrowse link NW_004936647 3,218,383 3,270,571 RGD:9068941
G Ppp2r1a protein phosphatase 2 scaffold subunit Aalpha JBrowse link NW_004936901 622,893 653,044 RGD:9068941
G Sgo2 shugoshin 2 JBrowse link NW_004936825 350,390 373,005 RGD:9068941
meiotic telomere clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link NW_004936551 359,134 534,672 RGD:9068941
G Cep63 centrosomal protein 63 JBrowse link NW_004936529 7,577,122 7,632,161 RGD:9068941
G Majin membrane anchored junction protein JBrowse link NW_004936599 4,382,751 4,400,400 RGD:9068941
G Mei1 meiotic double-stranded break formation protein 1 JBrowse link NW_004936492 196,829 277,052 RGD:9068941
G Mlh1 mutL homolog 1 JBrowse link NW_004936473 26,556,636 26,600,830 RGD:9068941
G Spo11 SPO11 initiator of meiotic double stranded breaks JBrowse link NW_004936530 183,271 197,549 RGD:9068941
G Terb1 telomere repeat binding bouquet formation protein 1 JBrowse link NW_004936475 17,038,956 17,077,887 RGD:9068941
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link NW_004936471 7,713,562 7,728,720 RGD:9068941
G Terf1 telomeric repeat binding factor 1 JBrowse link NW_004936648 1,809,395 1,835,890 RGD:9068941
G Ube2b ubiquitin conjugating enzyme E2 B JBrowse link NW_004936647 891,357 913,963 RGD:9068941
positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sgo2 shugoshin 2 JBrowse link NW_004936825 350,390 373,005 RGD:9068941
synaptonemal complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ago4 argonaute RISC component 4 JBrowse link NW_004936474 18,335,536 18,371,398 RGD:9068941
G Bag6 BAG cochaperone 6 JBrowse link NW_004936727 1,866,235 1,885,266 RGD:9068941
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 JBrowse link NW_004936483 17,216,288 17,296,430 RGD:9068941
G Ehmt2 euchromatic histone lysine methyltransferase 2 JBrowse link NW_004936727 1,648,451 1,663,294 RGD:9068941
G Hormad1 HORMA domain containing 1 JBrowse link NW_004936580 933,123 956,201 RGD:9068941
G Mcmdc2 minichromosome maintenance domain containing 2 JBrowse link NW_004936496 7,149,501 7,182,771 RGD:9068941
G Meioc meiosis specific with coiled-coil domain JBrowse link NW_004936541 1,064,702 1,066,742 RGD:9068941
G Mlh3 mutL homolog 3 JBrowse link NW_004936488 4,164,322 4,195,408 RGD:9068941
G Rad21l1 RAD21 cohesin complex component like 1 JBrowse link NW_004936485 17,413,006 17,435,951 RGD:9068941
G Rec8 REC8 meiotic recombination protein JBrowse link NW_004936722 369,366 375,243 RGD:9068941
G Spo11 SPO11 initiator of meiotic double stranded breaks JBrowse link NW_004936530 183,271 197,549 RGD:9068941
G Syce3 synaptonemal complex central element protein 3 JBrowse link NW_004936629 264,077 281,119 RGD:9068941
G Sycp1 synaptonemal complex protein 1 JBrowse link NW_004936627 239,232 365,062 RGD:9068941
G Sycp3 synaptonemal complex protein 3 JBrowse link NW_004936492 12,316,868 12,326,778 RGD:9068941
G Syde1 synapse defective Rho GTPase homolog 1 JBrowse link NW_004936596 5,352,813 5,359,561 RGD:9068941
G Tex11 testis expressed 11 JBrowse link NW_004936762 681,962 969,749 RGD:9068941
G Tex12 testis expressed 12 JBrowse link NW_004936612 2,297,754 2,303,130 RGD:9068941
G Tex15 testis expressed 15, meiosis and synapsis associated JBrowse link NW_004936792 668,290 727,197 RGD:9068941
G Trip13 thyroid hormone receptor interactor 13 JBrowse link NW_004936815 734,029 745,381 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11930
    reproductive process 1393
      meiotic cell cycle process 172
        chromosome organization involved in meiotic cell cycle 63
          centromere detachment from spindle pole body involved in meiotic chromosome organization 0
          homologous chromosome pairing at meiosis + 46
          karyosome formation + 0
          kinetochore disassembly involved in meiotic chromosome organization 0
          linear element maturation + 0
          meiotic centromere clustering 0
          meiotic chromosome condensation 5
          meiotic chromosome decondensation 0
          meiotic sister chromatid cohesion + 7
          meiotic sister chromatid segregation + 7
          meiotic telomere clustering + 12
          meiotic telomere maintenance via semi-conservative replication 0
          premeiotic DNA replication DNA duplex unwinding 0
          synaptonemal complex assembly + 19
Path 2
Term Annotations click to browse term
  biological_process 11930
    cellular process 11111
      cellular component organization or biogenesis 4869
        cellular component organization 4791
          organelle organization 2956
            chromosome organization 861
              chromosome organization involved in meiotic cell cycle 63
                centromere detachment from spindle pole body involved in meiotic chromosome organization 0
                homologous chromosome pairing at meiosis + 46
                karyosome formation + 0
                kinetochore disassembly involved in meiotic chromosome organization 0
                linear element maturation + 0
                meiotic centromere clustering 0
                meiotic chromosome condensation 5
                meiotic chromosome decondensation 0
                meiotic sister chromatid cohesion + 7
                meiotic sister chromatid segregation + 7
                meiotic telomere clustering + 12
                meiotic telomere maintenance via semi-conservative replication 0
                premeiotic DNA replication DNA duplex unwinding 0
                synaptonemal complex assembly + 19
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.