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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to cold
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Accession:GO:0070417 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
Synonyms:exact_synonym: cellular response to cold stress


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cellular response to cold term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cidea cell death-inducing DFFA-like effector a ISO (MGI:MGI:5914794|PMID:28763438) RGD PMID:28763438 MGI:MGI:5914794 NCBI chr18:63,082,861...63,108,450
Ensembl chr18:63,098,144...63,108,051
JBrowse link
G Cirbp cold inducible RNA binding protein ISO (MGI:MGI:87836|PMID:9151692) RGD PMID:9151692 MGI:MGI:87836 NCBI chr 7:12,400,066...12,405,054
Ensembl chr 7:12,401,207...12,405,022
JBrowse link
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 ISO
ISS
(MGI:MGI:5617428|PMID:25329545)
GO_REF:0000024
RGD
UniProt
PMID:25329545 GO_REF:0000024, MGI:MGI:5617428 NCBI chr15:104,186,918...104,226,236
Ensembl chr15:104,186,792...104,226,329
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO
ISS
(PMID:25329545)
GO_REF:0000024
RGD
UniProt
PMID:25329545 GO_REF:0000024 NCBI chr 4:98,648,513...98,709,695
Ensembl chr 4:98,648,545...98,709,694
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (PMID:25329545) RGD PMID:25329545 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Nfe2l1 nuclear factor, erythroid 2-like 1 ISO MGI:MGI:6101514 (MGI:MGI:6198859|PMID:29400713) RGD PMID:29400713 MGI:MGI:6198859 NCBI chr10:84,686,762...84,699,313
Ensembl chr10:84,682,460...84,698,886
JBrowse link
G Rnf34 ring finger protein 34 ISO (MGI:MGI:5582154|PMID:22064484) RGD PMID:22064484 MGI:MGI:5582154 NCBI chr12:39,164,290...39,185,209
Ensembl chr12:39,164,290...39,185,168
JBrowse link
G Saxo1 stabilizer of axonemal microtubules 1 ISO (PMID:25673876) RGD PMID:25673876 NCBI chr 5:104,771,081...104,921,001
Ensembl chr 5:104,771,392...104,920,906
JBrowse link
G Saxol1 stabilizer of axonemal microtubules like 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:29,520,263...29,522,420
Ensembl chr  X:29,520,263...29,522,420
JBrowse link
G Slc9a1 solute carrier family 9 member A1 IEP RGD PMID:15452191 RGD:1625557 NCBI chr 5:151,573,122...151,626,360
Ensembl chr 5:151,573,092...151,627,316
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 IMP RGD PMID:21068322 RGD:10043615 NCBI chr 5:3,783,247...3,836,485
Ensembl chr 5:3,783,247...3,836,485
JBrowse link
G Ucp1 uncoupling protein 1 ISO (MGI:MGI:5914794|PMID:28763438) RGD PMID:28763438 MGI:MGI:5914794 NCBI chr19:24,456,976...24,464,808
Ensembl chr19:24,456,976...24,464,807
JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:12084999 RGD:11079231 NCBI chr 4:158,085,059...158,219,525
Ensembl chr 4:158,088,505...158,219,523
JBrowse link
cellular response to freezing term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas2 abraxas 2, BRISC complex subunit ISO MGI:MGI:88096 (MGI:MGI:5467904|PMID:22974638) RGD PMID:22974638 MGI:MGI:5467904 NCBI chr 1:204,861,768...204,887,344
Ensembl chr 1:204,861,566...204,887,377
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    response to stimulus 10568
      response to stress 4059
        response to cold 73
          cellular response to cold 14
            cellular response to freezing + 1
            positive regulation of transcription from RNA polymerase II promoter in response to cold + 0
            trehalose metabolism in response to cold stress 0
Path 2
Term Annotations click to browse term
  biological_process 20014
    response to stimulus 10568
      response to abiotic stimulus 1506
        response to temperature stimulus 234
          response to cold 73
            cellular response to cold 14
              cellular response to freezing + 1
              positive regulation of transcription from RNA polymerase II promoter in response to cold + 0
              trehalose metabolism in response to cold stress 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.