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ONTOLOGY REPORT - ANNOTATIONS


Term:response to fatty acid
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Accession:GO:0070542 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.


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response to fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase IEP lipoic acid; in pilocarpine-treated rats RGD PMID:20026167 RGD:4144137 NCBI chr 5:78,368,867...78,379,206
Ensembl chr 5:78,368,867...78,379,346
JBrowse link
G Alas2 5'-aminolevulinate synthase 2 IEP RGD PMID:21737922 RGD:11035225 NCBI chr  X:23,167,576...23,187,356
Ensembl chr  X:23,167,696...23,187,341
JBrowse link
G Apoc3 apolipoprotein C3 IEP RGD PMID:20938723 RGD:10054090 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
G Ass1 argininosuccinate synthase 1 IEP RGD PMID:19651254 RGD:4140454 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Cat catalase IEP RGD PMID:23232760 RGD:9068874 NCBI chr 3:93,379,872...93,412,058
Ensembl chr 3:93,379,874...93,412,058
JBrowse link
G Ccn2 cellular communication network factor 2 IEP omega-3 RGD PMID:19656915 RGD:2314484 NCBI chr 1:21,851,657...21,854,773
Ensembl chr 1:21,851,660...21,854,773
JBrowse link
G Cd36 CD36 molecule IDA
ISO
IMP
PMID:21610069
(MGI:MGI:5565447|PMID:23557700), (MGI:MGI:5693361|PMID:21610069)
RGD PMID:21610069, PMID:23557700, PMID:21610069, PMID:23557700 MGI:MGI:5565447, MGI:MGI:5693361, RGD:10402038, RGD:10402039 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A IEP RGD PMID:22395468 RGD:11252094 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Cdkn2a_v1 cyclin-dependent kinase inhibitor 2A, variant 1 IEP RGD PMID:22395468 RGD:11252094
G Cpt2 carnitine palmitoyltransferase 2 IEP RGD PMID:10796071, PMID:10380116 RGD:2326088, RGD:21410186 NCBI chr 5:127,505,646...127,523,016
Ensembl chr 5:127,505,614...127,523,089
JBrowse link
G Ep300 E1A binding protein p300 IEP RGD PMID:17916272 RGD:2312267 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Fabp3 fatty acid binding protein 3 IEP RGD PMID:17001452 RGD:2307332 NCBI chr 5:148,528,854...148,535,597
Ensembl chr 5:148,528,725...148,535,565
JBrowse link
G Ffar1 free fatty acid receptor 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5607397|PMID:24130766)
(PMID:24130766)
Ensembl
UniProt
RGD
PMID:24130766 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5607397 NCBI chr 1:89,308,475...89,309,379
Ensembl chr 1:89,308,475...89,309,379
JBrowse link
G Foxo1 forkhead box O1 ISS
ISO
GO_REF:0000024
(MGI:MGI:6414737|PMID:32103177)
UniProt
RGD
PMID:32103177 GO_REF:0000024, MGI:MGI:6414737 NCBI chr 2:141,451,234...141,527,016
Ensembl chr 2:141,451,234...141,527,016
JBrowse link
G Foxo3 forkhead box O3 ISO (MGI:MGI:6414737|PMID:32103177) RGD PMID:32103177 MGI:MGI:6414737 NCBI chr20:46,428,078...46,519,156
Ensembl chr20:46,428,124...46,519,144
JBrowse link
G Gipr gastric inhibitory polypeptide receptor IEP palmitic acid RGD PMID:12475913 RGD:727482 NCBI chr 1:80,063,047...80,073,223
Ensembl chr 1:80,063,049...80,073,223
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase IEP RGD PMID:2242030 RGD:2313674 NCBI chr19:57,614,813...57,640,524
Ensembl chr19:57,614,628...57,640,726
JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase IEP 3-thia fatty acids RGD PMID:10419135 RGD:2326127 NCBI chr 5:154,294,841...154,308,582
Ensembl chr 5:154,294,806...154,308,640
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP 3-thia fatty acids RGD PMID:10796071 RGD:2326088 NCBI chr 2:200,452,623...200,480,785
Ensembl chr 2:200,452,624...200,479,423
JBrowse link
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 IEP RGD PMID:19130109 RGD:4889519 NCBI chr17:1,579,319...1,610,745
Ensembl chr17:1,579,319...1,610,745
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP RGD PMID:19130109 RGD:4889519
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta IEP RGD PMID:19179648 RGD:7495775 NCBI chr16:74,177,233...74,230,809
Ensembl chr16:74,177,215...74,230,815
JBrowse link
G Insig1 insulin induced gene 1 IEP RGD PMID:16222032 RGD:2308856 NCBI chr 4:342,302...350,515
Ensembl chr 4:342,302...350,515
JBrowse link
G Insig2 insulin induced gene 2 IEP RGD PMID:16222032 RGD:2308856 NCBI chr13:37,264,818...37,292,718
Ensembl chr13:37,266,312...37,287,458
JBrowse link
G Lipc lipase C, hepatic type IEP RGD PMID:2086700 RGD:2308776 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G LOC681458 similar to stearoyl-coenzyme A desaturase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:263,968,156...264,003,991
Ensembl chr 1:263,968,134...264,004,008
JBrowse link
G Mbp myelin basic protein IEP RGD PMID:21892882 RGD:7349332 NCBI chr18:79,326,738...79,437,310
Ensembl chr18:79,326,738...79,437,310
JBrowse link
G Mfn2 mitofusin 2 IEP palmitate RGD PMID:25034891 RGD:13204821 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 IEP docosahexaenoic acid RGD PMID:18781386 RGD:2308890 NCBI chr 2:91,450,162...91,497,091
Ensembl chr 2:91,450,162...91,497,091
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 IEP non-esterified fatty acids, palmitic acid RGD PMID:17181874 RGD:2311176 NCBI chr12:9,496,044...9,501,211
Ensembl chr12:9,496,044...9,501,213
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 IEP ethyl eicosapentaenoic acid RGD PMID:19369057 RGD:4108479 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Plat plasminogen activator, tissue type IEP eicosapentaenoic acid ethyl ester RGD PMID:14614217 RGD:2312394 NCBI chr16:74,098,263...74,122,897
Ensembl chr16:74,098,260...74,122,889
JBrowse link
G Pon1 paraoxonase 1 IEP olive oil RGD PMID:23383120 RGD:8547690 NCBI chr 4:30,249,749...30,276,297
Ensembl chr 4:30,249,742...30,276,372
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 IEP RGD PMID:16983392 RGD:5688222 NCBI chr 3:15,560,685...15,582,339
Ensembl chr 3:15,560,712...15,582,344
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IEP RGD PMID:16983392 RGD:5688222 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Reln reelin IEP alpha linolenic acid RGD PMID:19447164 RGD:2317771 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Scd stearoyl-CoA desaturase IDA
IBA
PMID:1982442
PMID:21873635
UniProt
GO_Central
PMID:1982442, PMID:21873635 RGD:10054070, RGD:13792537 NCBI chr 1:264,159,966...264,173,061
Ensembl chr 1:264,160,129...264,172,729
JBrowse link
G Scd2 stearoyl-Coenzyme A desaturase 2 IDA
IBA
PMID:1982442
PMID:21873635
UniProt
GO_Central
PMID:1982442, PMID:21873635 RGD:10054070, RGD:13792537 NCBI chr 1:264,059,374...264,072,433
Ensembl chr 1:264,059,374...264,072,433
JBrowse link
G Scd4 stearoyl-coenzyme A desaturase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,094,007...264,105,473
Ensembl chr 1:264,094,080...264,105,344
JBrowse link
G Sox9 SRY-box transcription factor 9 ISS
ISO
GO_REF:0000024
(MGI:MGI:6414737|PMID:32103177)
UniProt
RGD
PMID:32103177 GO_REF:0000024, MGI:MGI:6414737 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP RGD PMID:19736311 RGD:2315081 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 IEP RGD PMID:16222032 RGD:2308856 NCBI chr10:46,570,996...46,593,021
Ensembl chr10:46,570,996...46,593,009
JBrowse link
G Srebf1_v2 sterol regulatory element binding factor 1, variant 2 IEP RGD PMID:16222032 RGD:2308856
G Tbxas1 thromboxane A synthase 1 IEP RGD PMID:9262373 RGD:11059607 NCBI chr 4:66,624,181...66,846,745
Ensembl chr 4:66,670,618...66,846,805
JBrowse link
G Tlr2 toll-like receptor 2 IDA RGD PMID:19144836 RGD:2312510 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Tlr4 toll-like receptor 4 IDA RGD PMID:19144836 RGD:2312510 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 NOT ISO (MGI:MGI:5440106|PMID:23021218) RGD PMID:23021218 MGI:MGI:5440106 NCBI chr12:47,698,915...47,737,902
Ensembl chr12:47,698,947...47,737,902
JBrowse link
G Ucp2 uncoupling protein 2 IEP RGD PMID:18079609 RGD:2313533 NCBI chr 1:165,506,375...165,512,744
Ensembl chr 1:165,506,361...165,512,744
JBrowse link
cellular response to butyrate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn1 claudin 1 IEP RGD PMID:22684624 RGD:11341733 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 IEP RGD PMID:11522747 RGD:10402752 NCBI chr12:23,839,390...23,841,051
Ensembl chr12:23,839,399...23,841,049
JBrowse link
cellular response to fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 IEP fish oil chylomicron remnants RGD PMID:11786296 RGD:1598704 NCBI chr 1:47,972,399...47,992,654
Ensembl chr 1:47,972,399...47,992,653
JBrowse link
G Adipor2 adiponectin receptor 2 IEP RGD PMID:21194380 RGD:24922202 NCBI chr 4:151,412,135...151,480,108
Ensembl chr 4:151,414,684...151,428,894
JBrowse link
G Ager advanced glycosylation end product-specific receptor IEP RGD PMID:22217518 RGD:7245568 NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member IEP RGD PMID:11463352 RGD:2306342 NCBI chr12:40,466,418...40,498,813
Ensembl chr12:40,466,495...40,498,752
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP leukotriene B4 RGD PMID:14656734 RGD:11526147 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccnb1 cyclin B1 IEP butyrate RGD PMID:14674679 RGD:2316349 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IEP palmitate RGD PMID:19332540 RGD:7242708 NCBI chr 1:218,568,157...218,629,679
Ensembl chr 1:218,569,510...218,629,678
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IEP RGD PMID:16382163 RGD:10059371 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G E2f1 E2F transcription factor 1 IEP RGD PMID:19180667 RGD:2316259 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
G Edn1 endothelin 1 IEP lysophosphatidic acid RGD PMID:9784597 RGD:8662270 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Fdps farnesyl diphosphate synthase IEP RGD PMID:15473864 RGD:2316296 NCBI chr 2:188,403,595...188,413,219
Ensembl chr 2:188,392,858...188,413,219
JBrowse link
G Ffar2 free fatty acid receptor 2 IDA
ISO
PMID:23589301
(MGI:MGI:4366644|PMID:19865172), (MGI:MGI:5572877|PMID:16123168), (MGI:MGI:5574283|PMID:23589301), (MGI:MGI:5575446|PMID:23665276)
(PMID:12496283), (PMID:18801738), (PMID:23589301)
RGD PMID:12496283, PMID:16123168, PMID:18801738, PMID:19865172, PMID:23589301, PMID:23665276, PMID:23589301 MGI:MGI:4366644, MGI:MGI:5572877, MGI:MGI:5574283, MGI:MGI:5575446, RGD:8693374 NCBI chr 1:89,268,197...89,271,942
Ensembl chr 1:89,268,938...89,269,930
JBrowse link
G Ffar3 free fatty acid receptor 3 IDA
ISO
PMID:12496283
(MGI:MGI:5429475|PMID:22673524), (MGI:MGI:5572885|PMID:14722361), (MGI:MGI:5575446|PMID:23665276)
(PMID:12496283), (PMID:14722361), (PMID:18801738)
RGD PMID:12496283, PMID:14722361, PMID:18801738, PMID:22673524, PMID:23665276, PMID:12496283 MGI:MGI:5429475, MGI:MGI:5572885, MGI:MGI:5575446, RGD:8693366 NCBI chr 1:89,302,035...89,304,064
Ensembl chr 1:89,302,039...89,303,968
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEP docosahexaenoic acid RGD PMID:19272428 RGD:9685381 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP vaccenic acid, elaidic acid RGD PMID:20508999 RGD:2326106 NCBI chr 2:200,452,623...200,480,785
Ensembl chr 2:200,452,624...200,479,423
JBrowse link
G Il1b interleukin 1 beta IEP RGD PMID:23086551 RGD:7204439 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Irs1 insulin receptor substrate 1 ISO (MGI:MGI:6282942|PMID:21986524) RGD PMID:21986524 MGI:MGI:6282942 NCBI chr 9:88,033,668...88,086,488
Ensembl chr 9:88,033,668...88,086,488
JBrowse link
G Kcnk4 potassium two pore domain channel subfamily K member 4 IDA
ISO
PMID:15677687
(PMID:22282805)
RGD PMID:22282805, PMID:15677687 RGD:10047327 NCBI chr 1:222,182,997...222,192,139
Ensembl chr 1:222,183,276...222,189,604
JBrowse link
G Ldlr low density lipoprotein receptor ISO
IEA
RNAcentral:URS0000329B12_10090 (MGI:MGI:5659826|PMID:24255059)
GO_REF:0000107
RGD
Ensembl
PMID:24255059 GO_REF:0000107, MGI:MGI:5659826 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G LOC100909612 mitochondrial brown fat uncoupling protein 1-like IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:29,395,702...29,400,389
Ensembl chr19:29,396,157...29,400,355
JBrowse link
G Lpl lipoprotein lipase ISO (MGI:MGI:6282942|PMID:21986524) RGD PMID:21986524 MGI:MGI:6282942 NCBI chr16:22,537,687...22,561,487
Ensembl chr16:22,537,056...22,561,496
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IEP palmitate RGD PMID:19367376 RGD:5132883 NCBI chr10:81,657,152...81,666,542
Ensembl chr10:81,657,153...81,666,523
JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 IEP palmitate RGD PMID:19367376 RGD:5132883 NCBI chr10:81,648,216...81,653,717
Ensembl chr10:81,648,216...81,653,717
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IEA
ISO
GO_REF:0000107
(PMID:20447400)
Ensembl
RGD
PMID:20447400 GO_REF:0000107 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
G Olr59 olfactory receptor 59 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5574287|PMID:23401498)
Ensembl
UniProt
RGD
PMID:23401498 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5574287 NCBI chr 1:167,906,030...167,940,688
Ensembl chr 1:167,906,061...167,911,961
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 ISO (PMID:20715114) RGD PMID:20715114 NCBI chr  X:62,836,131...62,904,114
Ensembl chr  X:62,836,131...62,903,554
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20715114)
Ensembl
UniProt
RGD
PMID:20715114 GO_REF:0000024, GO_REF:0000107 NCBI chr 4:30,546,772...30,556,774
Ensembl chr 4:30,546,664...30,556,814
JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 ISO (MGI:MGI:5308004|PMID:19894142) RGD PMID:19894142 MGI:MGI:5308004 NCBI chr 9:91,667,748...91,683,468
Ensembl chr 9:91,665,986...91,882,927
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 IEP linoleic acid RGD PMID:17593346 RGD:4108505 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:22676303 RGD:7242169 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Ptafr platelet-activating factor receptor IEP arachidonic acid, docosahexaenoic acid RGD PMID:17515866 RGD:9999208 NCBI chr 5:150,746,284...150,775,675
Ensembl chr 5:150,754,021...150,775,672
JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 IEP RGD PMID:24615205 RGD:9586357 NCBI chr 7:141,355,623...141,366,725
Ensembl chr 7:141,355,994...141,366,732
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP butyrate RGD PMID:20149623 RGD:2325014 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 IEP palmitate RGD PMID:19332540 RGD:7242708 NCBI chr10:46,570,996...46,593,021
Ensembl chr10:46,570,996...46,593,009
JBrowse link
G Ucp1 uncoupling protein 1 IDA
ISO
PMID:22952235
(MGI:MGI:5444314|PMID:23063128)
RGD PMID:23063128, PMID:22952235 MGI:MGI:5444314, RGD:11541104 NCBI chr19:24,456,976...24,464,808
Ensembl chr19:24,456,976...24,464,807
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 IEP RGD PMID:19180667 RGD:2316259 NCBI chr 9:79,659,275...79,748,050
Ensembl chr 9:79,659,251...79,748,078
JBrowse link
cellular response to ionomycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk4 cyclin-dependent kinase 4 ISO (MGI:MGI:78049|PMID:8543804) RGD PMID:8543804 MGI:MGI:78049 NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418
JBrowse link
G Foxp1 forkhead box P1 IDA RGD PMID:21606195 RGD:11561924 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 IDA RGD PMID:21606195 RGD:11561924 NCBI chr15:34,493,163...34,502,238
Ensembl chr15:34,493,138...34,504,326
JBrowse link
G Plcb1 phospholipase C beta 1 IDA RGD PMID:11377826 RGD:8554253 NCBI chr 3:127,721,244...128,419,565
Ensembl chr 3:128,155,069...128,419,545
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17516843 RGD:10059651 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A ISO
ISS
(MGI:MGI:5706909|PMID:23185455)
GO_REF:0000024
RGD
UniProt
PMID:23185455 GO_REF:0000024, MGI:MGI:5706909 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link
G Zfp683 zinc finger protein 683 ISO (PMID:26179882) RGD PMID:26179882 NCBI chr 5:152,280,982...152,288,208 JBrowse link
cellular response to leptomycin B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Id3 inhibitor of DNA binding 3, HLH protein ISO (MGI:MGI:5512805|PMID:23523789) RGD PMID:23523789 MGI:MGI:5512805 NCBI chr 5:154,489,603...154,491,172
Ensembl chr 5:154,489,590...154,491,223
JBrowse link
G Ranbp1 RAN binding protein 1 IDA RGD PMID:10421839 RGD:9834999 NCBI chr11:86,890,585...86,898,818
Ensembl chr11:86,890,585...86,898,818
JBrowse link
cellular response to oleic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ass1 argininosuccinate synthase 1 IEP dexamethasone-stimulated hepatocytes RGD PMID:8985169 RGD:2303518 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP dexamethasone-stimulated hepatocytes RGD PMID:8985169 RGD:2303518 NCBI chr 9:74,113,437...74,236,274
Ensembl chr 9:74,124,016...74,236,274
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 ISO (MGI:MGI:5293272|PMID:21680734) RGD PMID:21680734 MGI:MGI:5293272 NCBI chr 1:164,113,459...164,143,818
Ensembl chr 1:164,113,459...164,143,818
JBrowse link
cellular response to prostaglandin D stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1c2 aldo-keto reductase family 1, member C2 ISO (PMID:18508192) RGD PMID:18508192 NCBI chr17:69,388,337...69,435,160
Ensembl chr17:69,388,335...69,404,341
JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 ISO (PMID:18508192) RGD PMID:18508192 NCBI chr17:69,761,126...69,778,021
Ensembl chr17:69,761,118...69,778,021
JBrowse link
G Ptgdr prostaglandin D2 receptor ISO MGI:MGI:2386956 (MGI:MGI:3761771|PMID:11562489) RGD PMID:11562489 MGI:MGI:3761771 NCBI chr15:19,195,606...19,196,508 JBrowse link
G Ptgfr prostaglandin F receptor ISO (PMID:18508192) RGD PMID:18508192 NCBI chr 2:257,005,813...257,039,036
Ensembl chr 2:257,005,829...257,038,105
JBrowse link
G Tnc tenascin C IEP RGD PMID:10502285 RGD:4889620 NCBI chr 5:79,789,686...79,874,555
Ensembl chr 5:79,789,671...79,874,671
JBrowse link
cellular response to prostaglandin E stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaca acetyl-CoA carboxylase alpha ISO
IEA
(MGI:MGI:5475040|PMID:23479225)
GO_REF:0000107
RGD
Ensembl
PMID:23479225 GO_REF:0000107, MGI:MGI:5475040 NCBI chr10:71,519,392...71,719,910
Ensembl chr10:71,536,533...71,719,910
JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 IEP RGD PMID:11108265 RGD:9681746 NCBI chr11:25,342,119...25,350,938
Ensembl chr11:25,342,126...25,350,974
JBrowse link
G Adcy6 adenylate cyclase 6 ISO
IEA
(PMID:18403039)
GO_REF:0000107
RGD
Ensembl
PMID:18403039 GO_REF:0000107 NCBI chr 7:140,270,678...140,291,722
Ensembl chr 7:140,270,692...140,291,620
JBrowse link
G Akap8 A-kinase anchoring protein 8 ISO (MGI:MGI:5763364|PMID:19531803) RGD PMID:19531803 MGI:MGI:5763364 NCBI chr 7:14,323,298...14,339,953
Ensembl chr 7:14,324,104...14,351,918
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO (MGI:MGI:5475040|PMID:23479225) RGD PMID:23479225 MGI:MGI:5475040 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Fn1 fibronectin 1 IEP RGD PMID:15833739 RGD:1601193 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Gnas GNAS complex locus IDA PMID:18403039 BHF-UCL PMID:18403039 RGD:8553387 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483
JBrowse link
G P2ry4 pyrimidinergic receptor P2Y4 ISO (MGI:MGI:5475040|PMID:23479225) RGD PMID:23479225 MGI:MGI:5475040 NCBI chr  X:70,421,599...70,447,109
Ensembl chr  X:70,426,951...70,428,364
JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 ISO (MGI:MGI:5475040|PMID:23479225) RGD PMID:23479225 MGI:MGI:5475040 NCBI chr 1:165,972,439...166,008,348
Ensembl chr 1:165,972,440...165,997,751
JBrowse link
G Pax6 paired box 6 IEP RGD PMID:23257891 RGD:8552382 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IEP RGD PMID:10797535 RGD:8553016 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO MGI:MGI:1336173 (MGI:MGI:5475040|PMID:23479225) RGD PMID:23479225 MGI:MGI:5475040 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ISO
IEA
MGI:MGI:2145955 (MGI:MGI:5475040|PMID:23479225)
GO_REF:0000107
RGD
Ensembl
PMID:23479225 GO_REF:0000107, MGI:MGI:5475040 NCBI chr 5:124,568,845...124,642,569
Ensembl chr 5:124,574,079...124,642,569
JBrowse link
G Prkce protein kinase C, epsilon ISO (MGI:MGI:5475040|PMID:23479225) RGD PMID:23479225 MGI:MGI:5475040 NCBI chr 6:9,483,400...9,973,396
Ensembl chr 6:9,790,422...9,973,396
JBrowse link
G Ptger2 prostaglandin E receptor 2 ISO
IBA
(MGI:MGI:5318023|PMID:18403039)
PMID:21873635
RGD PMID:18403039, PMID:21873635 MGI:MGI:5318023, RGD:13792537 NCBI chr15:19,336,029...19,349,759
Ensembl chr15:19,338,175...19,350,210
JBrowse link
G Ptger4 prostaglandin E receptor 4 IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:11248657, PMID:21873635 RGD:10043612, RGD:13792537 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 IEP
ISO
IEA
(PMID:16149051)
GO_REF:0000107
RGD
Ensembl
PMID:16149051, PMID:16149051 GO_REF:0000107, RGD:4107087 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Tnfsf4 TNF superfamily member 4 ISO (PMID:19029446) RGD PMID:19029446 NCBI chr13:79,269,973...79,293,775
Ensembl chr13:79,269,973...79,293,778
JBrowse link
cellular response to prostaglandin stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1c3 aldo-keto reductase family 1, member C3 ISO (PMID:22170488) RGD PMID:22170488 NCBI chr17:69,761,126...69,778,021
Ensembl chr17:69,761,118...69,778,021
JBrowse link
G Apob apolipoprotein B IEP RGD PMID:16545597 RGD:2325771 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IEP 15-deoxy-delta12,14-prostaglandin J2 RGD PMID:11936221 RGD:8553042 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
response to arachidonic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp5c protein phosphatase 5, catalytic subunit IDA PMID:15546861 ARUK-UCL PMID:15546861 RGD:13507298 NCBI chr 1:78,944,054...78,968,361
Ensembl chr 1:78,944,040...78,968,329
JBrowse link
response to butyrate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha IEP beta-hydroxy-beta-methylbutyrate RGD PMID:24124592 RGD:10045951 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
response to linoleic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing IEP RGD PMID:21684141 RGD:5685383 NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
JBrowse link
G Cd36 CD36 molecule ISO
ISS
(MGI:MGI:5693227|PMID:18162488)
GO_REF:0000024
RGD
UniProt
PMID:18162488 GO_REF:0000024, MGI:MGI:5693227 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP 13-hydroperoxy-9,11-octadecadienoic acid RGD PMID:16216487 RGD:2326151 NCBI chr 2:200,452,623...200,480,785
Ensembl chr 2:200,452,624...200,479,423
JBrowse link
G Sell selectin L IEP RGD PMID:20730605 RGD:5685699 NCBI chr13:82,369,820...82,387,774
Ensembl chr13:82,369,493...82,387,631
JBrowse link
response to oleic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aacs acetoacetyl-CoA synthetase IDA RGD PMID:2565110 RGD:2301026 NCBI chr12:36,512,393...36,555,694
Ensembl chr12:36,512,393...36,555,694
JBrowse link
G Acsl1 acyl-CoA synthetase long-chain family member 1 IEP RGD PMID:16428347 RGD:1599808 NCBI chr16:48,937,456...49,003,898
Ensembl chr16:48,937,456...49,003,246
JBrowse link
G Bad BCL2-associated agonist of cell death IEP RGD PMID:15627513 RGD:2292696 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453
JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP RGD PMID:8985169 RGD:2303518 NCBI chr 9:74,113,437...74,236,274
Ensembl chr 9:74,124,016...74,236,274
JBrowse link
G Sell selectin L IEP RGD PMID:20730605 RGD:5685699 NCBI chr13:82,369,820...82,387,774
Ensembl chr13:82,369,493...82,387,631
JBrowse link
response to prostaglandin E term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A2m alpha-2-macroglobulin IEP RGD PMID:6202298 RGD:10046045 NCBI chr 4:154,309,426...154,359,138
Ensembl chr 4:154,309,426...154,359,137
JBrowse link
G Aanat aralkylamine N-acetyltransferase IDA RGD PMID:6268470 RGD:2301043 NCBI chr10:105,568,091...105,572,407
Ensembl chr10:105,568,091...105,572,403
JBrowse link
G Ccl19 C-C motif chemokine ligand 19 ISO (PMID:14592837) RGD PMID:14592837 NCBI chr 5:58,181,025...58,182,969
Ensembl chr 5:58,181,026...58,183,017
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 ISO (PMID:14592837) RGD PMID:14592837 NCBI chr 5:58,197,678...58,198,782
Ensembl chr 5:58,197,680...58,198,782
JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 IDA RGD PMID:3937586 RGD:2307314 NCBI chr 7:70,333,150...70,340,006
Ensembl chr 7:70,335,061...70,340,005
JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 IEP RGD PMID:3282935 RGD:9685069 NCBI chr15:44,441,856...44,446,064
Ensembl chr15:44,442,555...44,442,875
Ensembl chr15:44,442,555...44,442,875
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IEP RGD PMID:19017254 RGD:2303960 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B IEP RGD PMID:23054057 RGD:9999397 NCBI chr10:82,800,704...82,816,735
Ensembl chr10:82,800,704...82,816,731
JBrowse link
G Ptger4 prostaglandin E receptor 4 IEP RGD PMID:10800959 RGD:10003104 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Serpina7 serpin family A member 7 IEP RGD PMID:970439 RGD:2312336 NCBI chr  X:110,226,565...110,232,202
Ensembl chr  X:110,226,572...110,232,179
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 IEP RGD PMID:12890451 RGD:2302028 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 ISO (PMID:14557487) RGD PMID:14557487 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
response to prostaglandin F term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 IEP RGD PMID:16947426 RGD:8662271 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:11517196 RGD:2300430 NCBI chr 2:200,452,623...200,480,785
Ensembl chr 2:200,452,624...200,479,423
JBrowse link
G Plcd1 phospholipase C, delta 1 IEP RGD PMID:11517196 RGD:2300430 NCBI chr 8:127,753,514...127,782,070
Ensembl chr 8:127,753,539...127,782,070
JBrowse link
G Yy1 YY1 transcription factor IEP RGD PMID:11861536 RGD:634518 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    response to stimulus 10583
      response to chemical 6342
        response to oxygen-containing compound 2344
          response to fatty acid 136
            cellular response to fatty acid + 73
            response to arachidonic acid + 1
            response to butyrate + 3
            response to ionomycin + 7
            response to leptomycin B + 2
            response to leukotriene B4 + 0
            response to linoleic acid + 4
            response to lipoic acid + 0
            response to oleic acid + 7
            response to palmitoleic acid + 0
            response to prostaglandin + 39
Path 2
Term Annotations click to browse term
  biological_process 20028
    response to stimulus 10583
      response to chemical 6342
        response to organic substance 3865
          response to lipid 1388
            response to fatty acid 136
              cellular response to fatty acid + 73
              response to arachidonic acid + 1
              response to butyrate + 3
              response to ionomycin + 7
              response to leptomycin B + 2
              response to leukotriene B4 + 0
              response to linoleic acid + 4
              response to lipoic acid + 0
              response to oleic acid + 7
              response to palmitoleic acid + 0
              response to prostaglandin + 39
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.