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ONTOLOGY REPORT - ANNOTATIONS


Term:protein modification by small protein removal
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Accession:GO:0070646 term browser browse the term
Definition:A protein modification process in which one or more covalently attached groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are removed from a target protein.


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protein modification by small protein removal term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Desi1 desumoylating isopeptidase 1 JBrowse link 7 123,238,332 123,259,636 RGD:13792537
G Desi2 desumoylating isopeptidase 2 JBrowse link 13 96,111,800 96,156,693 RGD:13792537
G Senp6 SUMO specific peptidase 6 JBrowse link 8 87,486,050 87,568,088 RGD:1624291
histone deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atxn7 ataxin 7 JBrowse link 15 12,421,432 12,569,649 RGD:1624291
G Atxn7l3 ataxin 7-like 3 JBrowse link 10 90,234,749 90,241,757 RGD:1624291
RGD:13792537
G Eny2 ENY2, transcription and export complex 2 subunit JBrowse link 7 83,348,656 83,358,430 RGD:1624291
RGD:13792537
G Kat2a lysine acetyltransferase 2A JBrowse link 10 88,611,586 88,619,558 RGD:1624291
G Supt3h SPT3 homolog, SAGA and STAGA complex component JBrowse link 9 18,249,565 18,604,814 RGD:1624291
RGD:1600115
G Taf10 TATA-box binding protein associated factor 10 JBrowse link 1 170,585,160 170,586,428 RGD:1624291
G Trrap transformation/transcription domain-associated protein JBrowse link 12 11,537,950 11,627,563 RGD:1624291
G Usp16 ubiquitin specific peptidase 16 JBrowse link 11 27,101,213 27,130,345 RGD:1624291
RGD:1600115
G Usp21 ubiquitin specific peptidase 21 JBrowse link 13 89,655,016 89,661,150 RGD:1624291
RGD:1600115
G Usp22 ubiquitin specific peptidase 22 JBrowse link 10 47,429,201 47,453,298 RGD:1624291
G Usp3 ubiquitin specific peptidase 3 JBrowse link 8 72,207,970 72,284,871 RGD:1624291
RGD:13792537
G Usp36 ubiquitin specific peptidase 36 JBrowse link 10 107,292,828 107,324,355 RGD:1624291
G Usp51 ubiquitin specific peptidase 51 JBrowse link X 19,268,352 19,273,753 RGD:1624291
histone H2A K63-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 JBrowse link 9 9,863,380 9,865,920 RGD:1600115
RGD:13792537
RGD:1624291
G Uimc1 ubiquitin interaction motif containing 1 JBrowse link 17 10,061,915 10,130,921 RGD:1624291
RGD:1600115
RGD:13792537
G Usp16 ubiquitin specific peptidase 16 JBrowse link 11 27,101,213 27,130,345 RGD:1624291
RGD:1600115
histone H2B conserved C-terminal lysine deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epop elongin BC and polycomb repressive complex 2 associated protein JBrowse link 10 85,573,369 85,574,889 RGD:1624291
G Usp15 ubiquitin specific peptidase 15 JBrowse link 7 66,595,707 66,687,707 RGD:1600115
RGD:1624291
G Usp49 ubiquitin specific peptidase 49 JBrowse link 9 15,314,875 15,375,365 RGD:1624291
G Usp7 ubiquitin specific peptidase 7 JBrowse link 10 6,930,462 7,019,910 RGD:1624291
RGD:1600115
monoubiquitinated histone H2A deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asxl1 ASXL transcriptional regulator 1 JBrowse link 3 148,832,231 148,902,356 RGD:1624291
RGD:1600115
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:1600115
RGD:1624291
G Mysm1 myb-like, SWIRM and MPN domains 1 JBrowse link 5 113,902,115 113,939,083 RGD:1624291
G Usp16 ubiquitin specific peptidase 16 JBrowse link 11 27,101,213 27,130,345 RGD:1624291
RGD:1600115
monoubiquitinated protein deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atxn3 ataxin 3 JBrowse link 6 125,817,420 125,853,461 RGD:1624291
RGD:1600115
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:1624291
RGD:1600115
G Usp1 ubiquitin specific peptidase 1 JBrowse link 5 117,583,502 117,594,872 RGD:1624291
RGD:1600115
G Usp15 ubiquitin specific peptidase 15 JBrowse link 7 66,595,707 66,687,707 RGD:1600115
RGD:1624291
G Usp47 ubiquitin specific peptidase 47 JBrowse link 1 176,854,589 176,937,763 RGD:1624291
G Usp7 ubiquitin specific peptidase 7 JBrowse link 10 6,930,462 7,019,910 RGD:1624291
RGD:1600115
negative regulation of protein deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 JBrowse link 9 82,436,453 82,444,669 RGD:1624291
G Trim21 tripartite motif-containing 21 JBrowse link 1 167,686,148 167,708,735 RGD:1624291
negative regulation of protein K48-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
G Ubxn1 UBX domain protein 1 JBrowse link 1 225,067,953 225,071,944 RGD:1624291
positive regulation of histone deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein JBrowse link 12 48,628,198 48,656,096 RGD:1624291
positive regulation of Lys63-specific deubiquitinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
positive regulation of protein deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tank TRAF family member-associated NFKB activator JBrowse link 3 47,439,007 47,515,706 RGD:1624291
G Tnip1 TNFAIP3 interacting protein 1 JBrowse link 10 40,255,776 40,303,092 RGD:1624291
G Wdr48 WD repeat domain 48 JBrowse link 8 128,577,080 128,610,287 RGD:13792537
G Zc3h12a zinc finger CCCH type containing 12A JBrowse link 5 143,111,342 143,120,131 RGD:1624291
RGD:1600115
positive regulation of protein K63-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nop53 NOP53 ribosome biogenesis factor JBrowse link 1 77,836,522 77,843,991 RGD:1624291
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
protein deneddylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cops2 COP9 signalosome subunit 2 JBrowse link 3 118,109,394 118,137,125 RGD:1624291
G Cops3 COP9 signalosome subunit 3 JBrowse link 10 46,182,680 46,206,083 RGD:1624291
G Cops4 COP9 signalosome subunit 4 JBrowse link 14 10,718,863 10,749,134 RGD:1600115
RGD:1624291
G Cops5 COP9 signalosome subunit 5 JBrowse link 5 8,876,090 8,894,345 RGD:1624291
RGD:13792537
G Cops6 COP9 signalosome subunit 6 JBrowse link 12 19,303,387 19,306,226 RGD:1624291
G Cops7a COP9 signalosome subunit 7A JBrowse link 4 157,479,549 157,486,944 RGD:1624291
G Cops7b COP9 signalosome subunit 7B JBrowse link 9 93,607,199 93,633,064 RGD:1624291
G Cops8 COP9 signalosome subunit 8 JBrowse link 9 97,772,224 97,782,055 RGD:1624291
G Gps1 G protein pathway suppressor 1 JBrowse link 10 109,966,875 109,971,912 RGD:1600115
RGD:1624291
G Tor1a torsin family 1, member A JBrowse link 3 9,800,322 9,807,318 RGD:1624291
RGD:1600115
protein desumoylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07015320.1 RGD:13792537
G AABR07057282.1 RGD:13792537
G AABR07057322.1 RGD:13792537
G AABR07062102.1 RGD:13792537
G AABR07062108.1 RGD:13792537
G AABR07062109.1 RGD:13792537
G AC099294.1 RGD:13792537
G Desi1 desumoylating isopeptidase 1 JBrowse link 7 123,238,332 123,259,636 RGD:1624291
G LOC100362532 Sumo1/sentrin/SMT3 specific peptidase 18-like JBrowse link 4 161,212,121 161,214,576 RGD:13792537
G LOC100910015 sentrin-specific protease 2-like JBrowse link 4 161,308,147 161,310,576 RGD:13792537
G LOC103689978 sentrin-specific protease 5 JBrowse link 11 72,035,540 72,070,679 RGD:13792537
G LOC690251 similar to SUMO/sentrin specific protease 5 JBrowse link 1 224,927,683 224,931,006 RGD:13792537
G Senp1 SUMO specific peptidase 1 JBrowse link 7 139,626,444 139,684,587 RGD:1624291
RGD:13792537
G Senp17 Sumo1/sentrin/SMT3 specific peptidase 17 JBrowse link 4 160,865,065 160,866,064 RGD:13792537
G Senp18 Sumo1/sentrin/SMT3 specific peptidase 18 JBrowse link 4 160,802,131 160,803,558 RGD:13792537
G Senp2 SUMO specific peptidase 2 JBrowse link 11 82,627,973 82,664,702 RGD:1600115
RGD:13792537
RGD:1624291
G Senp3 SUMO specific peptidase 3 JBrowse link 10 56,277,609 56,286,867 RGD:13792537
G Senp5 SUMO specific peptidase 5 JBrowse link 11 72,883,892 72,918,759 RGD:13792537
G Senp6 SUMO specific peptidase 6 JBrowse link 8 87,486,050 87,568,088 RGD:1624291
RGD:13792537
G Senp7 SUMO specific peptidase 7 JBrowse link 11 46,880,928 47,047,052 RGD:13792537
G Senp8 SUMO peptidase family member, NEDD8 specific JBrowse link 8 64,558,994 64,572,850 RGD:13792537
G Uspl1 ubiquitin specific peptidase like 1 JBrowse link 12 6,930,018 6,957,027 RGD:1624291
RGD:13792537
protein deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07006871.1 RGD:13792537
G AABR07013202.1 RGD:1600115
G Atxn3 ataxin 3 JBrowse link 6 125,817,420 125,853,461 RGD:1624291
RGD:13792537
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:1600115
RGD:13792537
RGD:1624291
G Cops5 COP9 signalosome subunit 5 JBrowse link 5 8,876,090 8,894,345 RGD:1624291
G Cyld CYLD lysine 63 deubiquitinase JBrowse link 19 19,264,984 19,323,817 RGD:1600115
RGD:1624291
G Desi2 desumoylating isopeptidase 2 JBrowse link 13 96,111,800 96,156,693 RGD:13792537
G Eif3f eukaryotic translation initiation factor 3, subunit F JBrowse link 1 173,532,826 173,541,806 RGD:1624291
G Josd1 Josephin domain containing 1 JBrowse link 7 120,905,343 120,919,261 RGD:13792537
G Josd2 Josephin domain containing 2 JBrowse link 1 100,473,426 100,477,352 RGD:1624291
RGD:13792537
G LOC100910107 ubiquitin carboxyl-terminal hydrolase DUB-1-like JBrowse link 1 169,720,247 169,721,788 RGD:1624291
RGD:13792537
G LOC100911860 ubiquitin carboxyl-terminal hydrolase 40-like JBrowse link 9 91,037,406 91,100,490 RGD:13792537
G LOC689730 similar to ubiquitin specific peptidase 17 (homolog) RGD:13792537
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 JBrowse link 6 127,282,445 127,301,086 RGD:1624291
G Otud1 OTU deubiquitinase 1 JBrowse link 17 86,406,643 86,410,670 RGD:13792537
G Otud3 OTU deubiquitinase 3 JBrowse link 5 157,346,286 157,368,450 RGD:13792537
G Otud4 OTU deubiquitinase 4 JBrowse link 19 31,895,753 31,942,509 RGD:13792537
G Otud5 OTU deubiquitinase 5 JBrowse link X 15,471,212 15,504,372 RGD:1624291
RGD:13792537
G Otud6a OTU deubiquitinase 6A JBrowse link X 70,256,299 70,257,746 RGD:13792537
G Otud6b OTU deubiquitinase 6B JBrowse link 5 28,333,019 28,350,093 RGD:1624291
RGD:13792537
G Otud7b OTU deubiquitinase 7B JBrowse link 2 198,231,353 198,302,220 RGD:1624291
G Otulinl OTU deubiquitinase with linear linkage specificity like JBrowse link 2 80,383,642 80,408,672 RGD:1600115
RGD:1624291
G Psmd14 proteasome 26S subunit, non-ATPase 14 JBrowse link 3 47,578,449 47,673,330 RGD:13792537
G RGD1561481 similar to ubiquitin specific protease 12 JBrowse link 16 70,081,041 70,085,061 RGD:13792537
G Stambp Stam binding protein JBrowse link 4 115,249,343 115,277,340 RGD:1624291
RGD:13792537
G Stambpl1 STAM binding protein-like 1 JBrowse link 1 252,490,125 252,536,113 RGD:13792537
G Tnfaip3 TNF alpha induced protein 3 JBrowse link 1 14,401,103 14,416,369 RGD:1624291
G Uchl1 ubiquitin C-terminal hydrolase L1 JBrowse link 14 43,133,224 43,143,942 RGD:1624291
RGD:13792537
G Uchl3 ubiquitin C-terminal hydrolase L3 JBrowse link 15 86,153,624 86,198,127 RGD:1624291
RGD:13792537
G Uchl5 ubiquitin C-terminal hydrolase L5 JBrowse link 13 60,568,102 60,603,812 RGD:13792537
RGD:1624291
G Uck2 uridine-cytidine kinase 2 JBrowse link 13 85,376,716 85,443,976 RGD:634248
G Usp1 ubiquitin specific peptidase 1 JBrowse link 5 117,583,502 117,594,872 RGD:1624291
RGD:13792537
RGD:1600115
G Usp10 ubiquitin specific peptidase 10 JBrowse link 19 52,566,274 52,608,820 RGD:1600115
RGD:13792537
RGD:1624291
G Usp11 ubiquitin specific peptidase 11 JBrowse link X 1,687,820 1,703,991 RGD:1624291
G Usp12 ubiquitin specific peptidase 12 JBrowse link 12 10,037,686 10,087,685 RGD:1624291
RGD:13792537
G Usp13 ubiquitin specific peptidase 13 JBrowse link 2 119,197,153 119,317,507 RGD:13792537
G Usp14 ubiquitin specific peptidase 14 JBrowse link 18 1,178,785 1,216,573 RGD:1624291
G Usp15 ubiquitin specific peptidase 15 JBrowse link 7 66,595,707 66,687,707 RGD:634484
RGD:1600115
RGD:1624291
G Usp18 ubiquitin specific peptidase 18 JBrowse link 4 153,812,312 153,834,374 RGD:13792537
G Usp19 ubiquitin specific peptidase 19 JBrowse link 8 117,280,690 117,291,729 RGD:8554323
RGD:1600115
RGD:1624291
G Usp2 ubiquitin specific peptidase 2 JBrowse link 8 48,403,985 48,432,525 RGD:634247
RGD:1624291
RGD:1600115
RGD:10047248
G Usp20 ubiquitin specific peptidase 20 JBrowse link 3 9,822,586 9,856,057 RGD:1624291
G Usp22 ubiquitin specific peptidase 22 JBrowse link 10 47,429,201 47,453,298 RGD:1624291
G Usp24 ubiquitin specific peptidase 24 JBrowse link 5 125,896,725 126,030,411 RGD:13792537
G Usp25 ubiquitin specific peptidase 25 JBrowse link 11 15,436,080 15,558,646 RGD:1624291
RGD:13792537
G Usp26 ubiquitin specific peptidase 26 JBrowse link X 139,030,239 139,079,336 RGD:1624291
RGD:13792537
G Usp27x ubiquitin specific peptidase 27, X-linked JBrowse link X 15,987,964 15,991,149 RGD:1624291
G Usp28 ubiquitin specific peptidase 28 JBrowse link 8 53,295,188 53,355,572 RGD:1600115
RGD:13792537
RGD:1624291
G Usp29 ubiquitin specific peptidase 29 JBrowse link 1 69,988,673 70,042,015 RGD:13792537
G Usp30 ubiquitin specific peptidase 30 JBrowse link 12 48,262,663 48,316,580 RGD:1624291
RGD:13792537
RGD:1600115
G Usp31 ubiquitin specific peptidase 31 JBrowse link 1 191,615,146 191,651,628 RGD:1624291
G Usp32 ubiquitin specific peptidase 32 JBrowse link 10 72,300,173 72,474,574 RGD:1600115
G Usp33 ubiquitin specific peptidase 33 JBrowse link 2 257,567,179 257,602,817 RGD:1624291
G Usp34 ubiquitin specific peptidase 34 JBrowse link 14 108,060,653 108,264,706 RGD:1624291
RGD:13792537
G Usp35 ubiquitin specific peptidase 35 JBrowse link 1 162,283,866 162,307,610 RGD:1624291
RGD:13792537
G Usp36 ubiquitin specific peptidase 36 JBrowse link 10 107,292,828 107,324,355 RGD:1624291
RGD:13792537
G Usp37 ubiquitin specific peptidase 37 JBrowse link 9 81,717,626 81,818,421 RGD:1624291
RGD:13792537
G Usp38 ubiquitin specific peptidase 38 JBrowse link 19 30,668,258 30,699,852 RGD:1624291
RGD:13792537
G Usp39 ubiquitin specific peptidase 39 JBrowse link 4 100,181,408 100,211,425 RGD:1600115
G Usp4 ubiquitin specific peptidase 4 JBrowse link 8 117,126,692 117,171,012 RGD:1600115
RGD:1624291
G Usp40 ubiquitin specific peptidase 40 JBrowse link 9 95,072,096 95,143,092 RGD:13792537
G Usp42 ubiquitin specific peptidase 42 JBrowse link 12 12,840,131 12,878,207 RGD:1624291
RGD:13792537
RGD:1600115
G Usp43 ubiquitin specific peptidase 43 JBrowse link 10 54,406,980 54,467,956 RGD:1600115
G Usp44 ubiquitin specific peptidase 44 JBrowse link 7 34,714,293 34,759,352 RGD:1624291
G Usp45 ubiquitin specific peptidase 45 JBrowse link 5 35,916,763 35,984,525 RGD:1624291
G Usp46 ubiquitin specific peptidase 46 JBrowse link 14 36,687,134 36,755,360 RGD:1600115
RGD:13792537
RGD:1624291
G Usp47 ubiquitin specific peptidase 47 JBrowse link 1 176,854,589 176,937,763 RGD:13792537
G Usp48 ubiquitin specific peptidase 48 JBrowse link 5 155,935,102 156,002,722 RGD:1600115
RGD:13792537
G Usp49 ubiquitin specific peptidase 49 JBrowse link 9 15,314,875 15,375,365 RGD:1624291
G Usp5 ubiquitin specific peptidase 5 JBrowse link 4 157,332,735 157,347,803 RGD:1624291
RGD:13792537
G Usp50 ubiquitin specific peptidase 50 JBrowse link 3 119,225,055 119,247,442 RGD:1624291
RGD:13792537
G Usp51 ubiquitin specific peptidase 51 JBrowse link X 19,268,352 19,273,753 RGD:1624291
G Usp53 ubiquitin specific peptidase 53 JBrowse link 2 227,098,795 227,160,385 RGD:1624291
G Usp54 ubiquitin specific peptidase 54 JBrowse link 15 4,091,834 4,190,408 RGD:1600115
G Usp7 ubiquitin specific peptidase 7 JBrowse link 10 6,930,462 7,019,910 RGD:2316130
RGD:13792537
RGD:1624291
RGD:1600115
G Usp8 ubiquitin specific peptidase 8 JBrowse link 3 119,173,818 119,222,499 RGD:1624291
RGD:13792537
G Usp9x ubiquitin specific peptidase 9, X-linked JBrowse link X 10,510,033 10,660,555 RGD:1624291
RGD:13792537
G Usp9y ubiquitin specific peptidase 9, Y-linked JBrowse link Y 1,260,512 1,403,417 RGD:1600115
RGD:13792537
G Wdr48 WD repeat domain 48 JBrowse link 8 128,577,080 128,610,287 RGD:1624291
G Yod1 YOD1 deubiquitinase JBrowse link 13 47,441,296 47,443,013 RGD:13792537
G Zc3h12a zinc finger CCCH type containing 12A JBrowse link 5 143,111,342 143,120,131 RGD:1624291
protein deubiquitination involved in ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otud7a OTU deubiquitinase 7A JBrowse link 1 124,311,873 124,655,437 RGD:13792537
G Otud7b OTU deubiquitinase 7B JBrowse link 2 198,231,353 198,302,220 RGD:13792537
G Tnfaip3 TNF alpha induced protein 3 JBrowse link 1 14,401,103 14,416,369 RGD:13792537
G Usp9x ubiquitin specific peptidase 9, X-linked JBrowse link X 10,510,033 10,660,555 RGD:1624291
G Zranb1 zinc finger RANBP2-type containing 1 JBrowse link 1 204,938,444 205,000,163 RGD:1624291
RGD:13792537
protein K11-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 JBrowse link 6 127,282,445 127,301,086 RGD:1624291
RGD:13792537
G Otud3 OTU deubiquitinase 3 JBrowse link 5 157,346,286 157,368,450 RGD:1624291
RGD:13792537
G Otud6a OTU deubiquitinase 6A JBrowse link X 70,256,299 70,257,746 RGD:1624291
RGD:13792537
G Otud7a OTU deubiquitinase 7A JBrowse link 1 124,311,873 124,655,437 RGD:1624291
RGD:13792537
G Otud7b OTU deubiquitinase 7B JBrowse link 2 198,231,353 198,302,220 RGD:1600115
RGD:13792537
RGD:1624291
G Tnfaip3 TNF alpha induced protein 3 JBrowse link 1 14,401,103 14,416,369 RGD:1624291
G Usp30 ubiquitin specific peptidase 30 JBrowse link 12 48,262,663 48,316,580 RGD:1624291
RGD:1600115
G Usp37 ubiquitin specific peptidase 37 JBrowse link 9 81,717,626 81,818,421 RGD:1624291
G Vcpip1 valosin containing protein interacting protein 1 JBrowse link 5 9,231,180 9,257,821 RGD:1624291
RGD:13792537
RGD:1600115
G Yod1 YOD1 deubiquitinase JBrowse link 13 47,441,296 47,443,013 RGD:1600115
RGD:1624291
protein K27-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otud3 OTU deubiquitinase 3 JBrowse link 5 157,346,286 157,368,450 RGD:1624291
RGD:13792537
G Otud6a OTU deubiquitinase 6A JBrowse link X 70,256,299 70,257,746 RGD:1624291
RGD:13792537
G Yod1 YOD1 deubiquitinase JBrowse link 13 47,441,296 47,443,013 RGD:1624291
RGD:1600115
protein K29-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otud6a OTU deubiquitinase 6A JBrowse link X 70,256,299 70,257,746 RGD:1624291
RGD:13792537
G Tnfaip3 TNF alpha induced protein 3 JBrowse link 1 14,401,103 14,416,369 RGD:13792537
G Usp13 ubiquitin specific peptidase 13 JBrowse link 2 119,197,153 119,317,507 RGD:1624291
G Yod1 YOD1 deubiquitinase JBrowse link 13 47,441,296 47,443,013 RGD:1624291
RGD:1600115
G Zranb1 zinc finger RANBP2-type containing 1 JBrowse link 1 204,938,444 205,000,163 RGD:1624291
RGD:13792537
protein K33-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otud6a OTU deubiquitinase 6A JBrowse link X 70,256,299 70,257,746 RGD:1624291
RGD:13792537
G Tnfaip3 TNF alpha induced protein 3 JBrowse link 1 14,401,103 14,416,369 RGD:13792537
G Yod1 YOD1 deubiquitinase JBrowse link 13 47,441,296 47,443,013 RGD:1624291
RGD:1600115
G Zranb1 zinc finger RANBP2-type containing 1 JBrowse link 1 204,938,444 205,000,163 RGD:1624291
RGD:13792537
protein K48-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07010717.1 RGD:1600115
G Atxn3 ataxin 3 JBrowse link 6 125,817,420 125,853,461 RGD:1624291
RGD:1600115
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:1600115
RGD:1624291
G Cyld CYLD lysine 63 deubiquitinase JBrowse link 19 19,264,984 19,323,817 RGD:1600115
G Desi2 desumoylating isopeptidase 2 JBrowse link 13 96,111,800 96,156,693 RGD:1600115
G LOC100910107 ubiquitin carboxyl-terminal hydrolase DUB-1-like JBrowse link 1 169,720,247 169,721,788 RGD:1624291
G Mindy1 MINDY lysine 48 deubiquitinase 1 JBrowse link 2 196,458,229 196,470,133 RGD:13792537
G Mindy2 MINDY lysine 48 deubiquitinase 2 JBrowse link 8 77,029,346 77,089,208 RGD:13792537
G Mindy3 MINDY lysine 48 deubiquitinase 3 JBrowse link 17 79,720,534 79,798,470 RGD:1600115
G Mindy4 MINDY lysine 48 deubiquitinase 4 JBrowse link 4 85,427,741 85,536,264 RGD:1600115
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 JBrowse link 1 222,451,674 222,459,952 RGD:1600115
RGD:13792537
RGD:1624291
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 JBrowse link 6 127,282,445 127,301,086 RGD:1624291
RGD:13792537
G Otud3 OTU deubiquitinase 3 JBrowse link 5 157,346,286 157,368,450 RGD:1624291
RGD:13792537
G Otud4 OTU deubiquitinase 4 JBrowse link 19 31,895,753 31,942,509 RGD:1624291
G Otud5 OTU deubiquitinase 5 JBrowse link X 15,471,212 15,504,372 RGD:1600115
RGD:1624291
G Otud7a OTU deubiquitinase 7A JBrowse link 1 124,311,873 124,655,437 RGD:13792537
G Otud7b OTU deubiquitinase 7B JBrowse link 2 198,231,353 198,302,220 RGD:1624291
RGD:13792537
RGD:1600115
G Tnfaip3 TNF alpha induced protein 3 JBrowse link 1 14,401,103 14,416,369 RGD:1624291
G Usp13 ubiquitin specific peptidase 13 JBrowse link 2 119,197,153 119,317,507 RGD:1600115
G Usp15 ubiquitin specific peptidase 15 JBrowse link 7 66,595,707 66,687,707 RGD:1600115
G Usp19 ubiquitin specific peptidase 19 JBrowse link 8 117,280,690 117,291,729 RGD:1624291
RGD:1600115
G Usp20 ubiquitin specific peptidase 20 JBrowse link 3 9,822,586 9,856,057 RGD:1624291
G Usp25 ubiquitin specific peptidase 25 JBrowse link 11 15,436,080 15,558,646 RGD:1624291
G Usp27x ubiquitin specific peptidase 27, X-linked JBrowse link X 15,987,964 15,991,149 RGD:1624291
G Usp33 ubiquitin specific peptidase 33 JBrowse link 2 257,567,179 257,602,817 RGD:1624291
G Usp34 ubiquitin specific peptidase 34 JBrowse link 14 108,060,653 108,264,706 RGD:1624291
G Usp37 ubiquitin specific peptidase 37 JBrowse link 9 81,717,626 81,818,421 RGD:1624291
G Usp5 ubiquitin specific peptidase 5 JBrowse link 4 157,332,735 157,347,803 RGD:1624291
G Usp50 ubiquitin specific peptidase 50 JBrowse link 3 119,225,055 119,247,442 RGD:13792537
G Usp7 ubiquitin specific peptidase 7 JBrowse link 10 6,930,462 7,019,910 RGD:1600115
G Usp8 ubiquitin specific peptidase 8 JBrowse link 3 119,173,818 119,222,499 RGD:1624291
RGD:13792537
G Usp9x ubiquitin specific peptidase 9, X-linked JBrowse link X 10,510,033 10,660,555 RGD:1600115
G Vcpip1 valosin containing protein interacting protein 1 JBrowse link 5 9,231,180 9,257,821 RGD:1624291
RGD:13792537
RGD:1600115
G Yod1 YOD1 deubiquitinase JBrowse link 13 47,441,296 47,443,013 RGD:1600115
RGD:1624291
protein K6-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otud3 OTU deubiquitinase 3 JBrowse link 5 157,346,286 157,368,450 RGD:1624291
RGD:13792537
G Usp13 ubiquitin specific peptidase 13 JBrowse link 2 119,197,153 119,317,507 RGD:1624291
G Usp30 ubiquitin specific peptidase 30 JBrowse link 12 48,262,663 48,316,580 RGD:1624291
RGD:1600115
protein K63-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abraxas1 abraxas 1, BRCA1 A complex subunit JBrowse link 14 10,424,674 10,439,010 RGD:13792537
G Abraxas2 abraxas 2, BRISC complex subunit JBrowse link 1 204,861,768 204,887,344 RGD:1624291
RGD:13792537
G Atxn3 ataxin 3 JBrowse link 6 125,817,420 125,853,461 RGD:1624291
RGD:1600115
G Babam1 BRISC and BRCA1 A complex member 1 JBrowse link 16 19,792,720 19,798,886 RGD:1624291
RGD:1600115
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 JBrowse link 9 9,863,380 9,865,920 RGD:1600115
RGD:13792537
RGD:1624291
G Cyld CYLD lysine 63 deubiquitinase JBrowse link 19 19,264,984 19,323,817 RGD:1600115
RGD:13792537
RGD:1624291
G Desi2 desumoylating isopeptidase 2 JBrowse link 13 96,111,800 96,156,693 RGD:1600115
G LOC100910107 ubiquitin carboxyl-terminal hydrolase DUB-1-like JBrowse link 1 169,720,247 169,721,788 RGD:1624291
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 JBrowse link 6 127,282,445 127,301,086 RGD:1624291
RGD:13792537
G Otud1 OTU deubiquitinase 1 JBrowse link 17 86,406,643 86,410,670 RGD:1624291
RGD:13792537
G Otud4 OTU deubiquitinase 4 JBrowse link 19 31,895,753 31,942,509 RGD:1624291
G Otud5 OTU deubiquitinase 5 JBrowse link X 15,471,212 15,504,372 RGD:1600115
RGD:1624291
G Otud7a OTU deubiquitinase 7A JBrowse link 1 124,311,873 124,655,437 RGD:13792537
G Otud7b OTU deubiquitinase 7B JBrowse link 2 198,231,353 198,302,220 RGD:1624291
RGD:13792537
RGD:1600115
G Psmd14 proteasome 26S subunit, non-ATPase 14 JBrowse link 3 47,578,449 47,673,330 RGD:1624291
G Shmt2 serine hydroxymethyltransferase 2 JBrowse link 7 70,824,718 70,829,822 RGD:1624291
G Spata2 spermatogenesis associated 2 JBrowse link 3 164,229,211 164,239,483 RGD:1600115
RGD:13792537
RGD:1624291
G Stambp Stam binding protein JBrowse link 4 115,249,343 115,277,340 RGD:13792537
G Stambpl1 STAM binding protein-like 1 JBrowse link 1 252,490,125 252,536,113 RGD:13792537
G Tnfaip3 TNF alpha induced protein 3 JBrowse link 1 14,401,103 14,416,369 RGD:1624291
G Usp13 ubiquitin specific peptidase 13 JBrowse link 2 119,197,153 119,317,507 RGD:1624291
G Usp20 ubiquitin specific peptidase 20 JBrowse link 3 9,822,586 9,856,057 RGD:1624291
G Usp25 ubiquitin specific peptidase 25 JBrowse link 11 15,436,080 15,558,646 RGD:1624291
G Usp27x ubiquitin specific peptidase 27, X-linked JBrowse link X 15,987,964 15,991,149 RGD:1624291
G Usp33 ubiquitin specific peptidase 33 JBrowse link 2 257,567,179 257,602,817 RGD:1624291
G Usp50 ubiquitin specific peptidase 50 JBrowse link 3 119,225,055 119,247,442 RGD:13792537
G Usp7 ubiquitin specific peptidase 7 JBrowse link 10 6,930,462 7,019,910 RGD:1600115
RGD:1624291
G Usp8 ubiquitin specific peptidase 8 JBrowse link 3 119,173,818 119,222,499 RGD:1624291
RGD:13792537
G Yod1 YOD1 deubiquitinase JBrowse link 13 47,441,296 47,443,013 RGD:1600115
RGD:1624291
G Zranb1 zinc finger RANBP2-type containing 1 JBrowse link 1 204,938,444 205,000,163 RGD:1624291
protein linear deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyld CYLD lysine 63 deubiquitinase JBrowse link 19 19,264,984 19,323,817 RGD:1600115
RGD:1624291
G Otulin OTU deubiquitinase with linear linkage specificity JBrowse link 2 80,267,724 80,293,204 RGD:1624291
RGD:13792537
G Spata2 spermatogenesis associated 2 JBrowse link 3 164,229,211 164,239,483 RGD:1600115
RGD:13792537
RGD:1624291
regulation of protein deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itch itchy E3 ubiquitin protein ligase JBrowse link 3 150,660,665 150,752,016 RGD:1624291
regulation of protein K48-linked deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otud4 OTU deubiquitinase 4 JBrowse link 19 31,895,753 31,942,509 RGD:1624291
RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12096
      primary metabolic process 10749
        protein metabolic process 6185
          proteolysis 1882
            protein modification by small protein removal 152
              protein deneddylation + 10
              protein desumoylation + 22
              protein deubiquitination + 121
Path 2
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12096
      organic substance metabolic process 11494
        macromolecule metabolic process 9943
          macromolecule modification 4106
            protein modification process 3901
              cellular protein modification process 3901
                protein modification by small protein conjugation or removal 934
                  protein modification by small protein removal 152
                    protein deneddylation + 10
                    protein desumoylation + 22
                    protein deubiquitination + 121
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.