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ONTOLOGY REPORT - ANNOTATIONS


Term:neutrophil-mediated killing of bacterium
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Accession:GO:0070944 term browser browse the term
Definition:The directed killing of a bacterium by a neutrophil.


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neutrophil-mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed ISO (PMID:20421939) RGD PMID:20421939 NCBI chr 7:12,638,320...12,640,168
Ensembl chr 7:12,638,322...12,640,232
JBrowse link
G F2 coagulation factor II IEA
ISO
GO_REF:0000107
(PMID:20421939)
Ensembl
RGD
PMID:20421939 GO_REF:0000107 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 ISO MGI:MGI:1930003 (MGI:MGI:5471912|PMID:23241959) RGD PMID:23241959 MGI:MGI:5471912 NCBI chr 9:14,727,887...14,743,371
Ensembl chr 9:14,727,976...14,809,447
JBrowse link
G Trem3 triggering receptor expressed on myeloid cells 3 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:14,713,935...14,725,945
Ensembl chr 9:14,713,935...14,724,093
JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator ISO MGI:MGI:3706236 (MGI:MGI:5518492|PMID:24042119) RGD PMID:24042119 MGI:MGI:5518492 NCBI chr 8:116,318,963...116,322,181
Ensembl chr 8:116,318,963...116,322,181
JBrowse link
neutrophil-mediated killing of gram-positive bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsg cathepsin G ISO
IEA
MGI:MGI:2182170 (MGI:MGI:4353632|PMID:11907569)
GO_REF:0000107
RGD
Ensembl
PMID:11907569 GO_REF:0000107, MGI:MGI:4353632 NCBI chr15:35,107,333...35,113,678
Ensembl chr15:35,111,091...35,113,678
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO MGI:MGI:3576788 (MGI:MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:MGI:4353632 NCBI chr12:25,497,104...25,506,300
Ensembl chr12:25,497,104...25,506,300
JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 ISO (PMID:21501162) RGD PMID:21501162 NCBI chr 2:25,222,324...25,235,275
Ensembl chr 2:25,222,328...25,235,275
JBrowse link
regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl6 C-X-C motif chemokine ligand 6 ISO MGI:MGI:4819800 (MGI:MGI:4819434|PMID:20643340) RGD PMID:20643340 MGI:MGI:4819434 NCBI chr14:18,860,201...18,920,839
Ensembl chr14:18,860,264...18,862,407
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    interspecies interaction between organisms 1919
      interaction with symbiont 99
        killing by host of symbiont cells 26
          neutrophil-mediated killing of symbiont cell 12
            neutrophil-mediated killing of bacterium 9
              negative regulation of neutrophil mediated killing of bacterium + 0
              neutrophil-mediated killing of gram-negative bacterium + 7
              neutrophil-mediated killing of gram-positive bacterium + 2
              positive regulation of neutrophil mediated killing of bacterium + 1
              regulation of neutrophil mediated killing of bacterium + 2
Path 2
Term Annotations click to browse term
  biological_process 20028
    response to stimulus 10583
      response to biotic stimulus 1745
        response to external biotic stimulus 1712
          response to other organism 1708
            defense response to other organism 1119
              killing by host of symbiont cells 26
                neutrophil-mediated killing of symbiont cell 12
                  neutrophil-mediated killing of bacterium 9
                    negative regulation of neutrophil mediated killing of bacterium + 0
                    neutrophil-mediated killing of gram-negative bacterium + 7
                    neutrophil-mediated killing of gram-positive bacterium + 2
                    positive regulation of neutrophil mediated killing of bacterium + 1
                    regulation of neutrophil mediated killing of bacterium + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.